Wall clock time and date at job start Sun Mar 7 2021 00:14:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34229 * 117.00676 * 2 1 4 4 O 1.20829 * 119.99484 * 359.97438 * 3 2 1 5 5 C 1.50691 * 120.00475 * 180.02562 * 3 2 1 6 6 N 1.46507 * 112.84753 * 334.66613 * 5 3 2 7 7 C 1.34774 * 120.00451 * 50.33284 * 6 5 3 8 8 O 1.21694 * 119.99324 * 359.97438 * 7 6 5 9 9 C 1.46419 * 120.00308 * 180.02562 * 7 6 5 10 10 C 1.34811 * 120.00202 * 180.02562 * 9 7 6 11 11 C 1.47206 * 119.99958 * 180.02562 * 10 9 7 12 12 C 1.39841 * 120.16364 * 180.02562 * 11 10 9 13 13 C 1.37898 * 119.81974 * 180.02562 * 12 11 10 14 14 C 1.38401 * 120.17294 * 0.02562 * 13 12 11 15 15 C 1.50699 * 119.82733 * 179.97438 * 14 13 12 16 16 O 1.42905 * 109.46972 * 65.00339 * 15 14 13 17 17 Si 1.86295 * 109.47097 * 184.99978 * 15 14 13 18 18 C 1.38403 * 120.34356 * 0.23234 * 14 13 12 19 19 C 1.37889 * 120.17024 * 359.49281 * 18 14 13 20 20 C 1.53777 * 113.61633 * 203.46731 * 5 3 2 21 21 C 1.53779 * 87.08202 * 270.79713 * 20 5 3 22 22 H 1.09002 * 113.61277 * 89.11686 * 21 20 5 23 23 O 1.42900 * 113.61209 * 219.93286 * 21 20 5 24 24 C 1.42898 * 113.99919 * 209.99995 * 23 21 20 25 25 C 1.53782 * 113.61786 * 105.85772 * 5 3 2 26 26 H 1.09005 * 109.47032 * 300.00811 * 1 2 3 27 27 H 1.09008 * 109.46937 * 60.00051 * 1 2 3 28 28 H 1.08997 * 109.47661 * 179.97438 * 1 2 3 29 29 H 0.97001 * 119.99357 * 230.33570 * 6 5 3 30 30 H 1.08002 * 119.99990 * 359.97438 * 9 7 6 31 31 H 1.08000 * 119.99542 * 359.97438 * 10 9 7 32 32 H 1.07998 * 120.09239 * 0.03911 * 12 11 10 33 33 H 1.07997 * 119.91161 * 180.02562 * 13 12 11 34 34 H 1.09000 * 109.47247 * 305.00274 * 15 14 13 35 35 H 0.96696 * 114.00036 * 179.97438 * 16 15 14 36 36 H 1.48504 * 110.00018 * 178.68145 * 17 15 14 37 37 H 1.48496 * 110.00262 * 300.00047 * 17 15 14 38 38 H 1.08007 * 119.91301 * 179.74007 * 18 14 13 39 39 H 1.08008 * 120.08512 * 180.24810 * 19 18 14 40 40 H 1.09001 * 113.61367 * 25.35070 * 20 5 3 41 41 H 1.09011 * 113.61394 * 156.16413 * 20 5 3 42 42 H 1.08994 * 109.47377 * 180.02562 * 24 23 21 43 43 H 1.09004 * 109.47352 * 300.00225 * 24 23 21 44 44 H 1.09004 * 109.47494 * 59.99866 * 24 23 21 45 45 H 1.09004 * 113.61515 * 203.75292 * 25 5 3 46 46 H 1.08998 * 113.61278 * 334.65533 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 7 4.1985 0.0857 0.5766 7 6 3.8372 -1.1420 0.1540 8 8 2.9854 -1.2628 -0.7067 9 6 4.4685 -2.3302 0.7313 10 6 4.1075 -3.5582 0.3083 11 6 4.7419 -4.7529 0.8891 12 6 4.3703 -6.0283 0.4524 13 6 4.9688 -7.1426 1.0017 14 6 5.9344 -7.0010 1.9831 15 6 6.5830 -8.2240 2.5785 16 8 7.3376 -8.9011 1.5713 17 14 7.7170 -7.7127 3.9653 18 6 6.3036 -5.7422 2.4243 19 6 5.7184 -4.6181 1.8807 20 6 4.1142 2.5975 0.5606 21 6 4.0338 3.1480 -0.8731 22 1 3.0730 3.6037 -1.1125 23 8 5.1441 3.9725 -1.2327 24 6 4.8282 4.9897 -2.1853 25 6 4.1609 1.6917 -1.3561 26 1 -0.3633 0.5140 0.8900 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 4.8771 0.1822 1.2630 30 1 5.2241 -2.2229 1.4955 31 1 3.3522 -3.6655 -0.4562 32 1 3.6169 -6.1404 -0.3132 33 1 4.6833 -8.1283 0.6653 34 1 5.8132 -8.8914 2.9659 35 1 7.7839 -9.6997 1.8845 36 1 8.3385 -8.9123 4.5817 37 1 8.7712 -6.8026 3.4501 38 1 7.0549 -5.6399 3.1935 39 1 6.0104 -3.6363 2.2232 40 1 3.4357 3.0909 1.2565 41 1 5.1318 2.5211 0.9440 42 1 5.7231 5.5715 -2.4060 43 1 4.4604 4.5279 -3.1016 44 1 4.0600 5.6456 -1.7753 45 1 5.1918 1.3675 -1.4991 46 1 3.5200 1.4549 -2.2054 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:24 Heat of formation + Delta-G solvation = -101.402417 kcal Electronic energy + Delta-G solvation = -30142.111797 eV Core-core repulsion = 25773.023371 eV Total energy + Delta-G solvation = -4369.088427 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.150 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.40340 -40.70303 -40.20804 -39.75511 -37.90675 -37.63129 -36.87411 -35.11160 -34.14472 -32.24625 -31.35339 -29.13543 -27.92768 -27.31571 -27.07276 -25.84337 -24.18682 -23.88344 -22.91990 -21.83706 -20.64984 -20.33229 -19.04747 -18.69173 -18.58529 -17.78218 -17.51382 -17.38287 -17.14725 -16.86118 -16.63210 -16.25187 -16.09595 -15.66657 -15.39458 -15.19938 -15.10387 -14.94615 -14.56692 -14.34492 -14.29487 -14.03503 -13.87032 -13.64221 -13.60910 -13.55909 -13.21033 -13.00046 -12.88005 -12.54170 -12.31566 -12.21114 -12.11271 -12.04916 -11.72225 -11.59284 -11.47998 -11.25103 -10.73014 -10.56937 -10.55559 -10.17925 -10.00494 -9.24959 -5.03304 -0.53086 0.36898 0.91939 1.10944 1.20883 1.53015 1.72658 1.88748 1.97688 2.33639 2.76086 2.82307 3.02149 3.26684 3.28796 3.52108 3.58634 3.69805 3.74240 3.78992 3.87071 4.05252 4.14349 4.19552 4.25610 4.30329 4.33244 4.37307 4.39023 4.45421 4.50064 4.50994 4.52864 4.67948 4.73437 4.74844 4.79369 4.80341 4.84616 4.93413 5.07029 5.11521 5.26099 5.38079 5.46350 5.49954 5.59675 5.85746 6.15697 6.35900 6.44226 6.80168 7.28399 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.308 6.308 3 C 0.477 3.523 4 O -0.506 6.506 5 C 0.156 3.844 6 N -0.713 5.713 7 C 0.544 3.456 8 O -0.499 6.499 9 C -0.211 4.211 10 C -0.014 4.014 11 C -0.073 4.073 12 C -0.092 4.092 13 C -0.094 4.094 14 C -0.061 4.061 15 C -0.079 4.079 16 O -0.535 6.535 17 Si 0.684 3.316 18 C -0.117 4.117 19 C -0.095 4.095 20 C -0.117 4.117 21 C 0.066 3.934 22 H 0.104 0.896 23 O -0.372 6.372 24 C 0.028 3.972 25 C -0.143 4.143 26 H 0.059 0.941 27 H 0.061 0.939 28 H 0.101 0.899 29 H 0.409 0.591 30 H 0.130 0.870 31 H 0.138 0.862 32 H 0.132 0.868 33 H 0.128 0.872 34 H 0.078 0.922 35 H 0.381 0.619 36 H -0.261 1.261 37 H -0.254 1.254 38 H 0.130 0.870 39 H 0.133 0.867 40 H 0.094 0.906 41 H 0.114 0.886 42 H 0.089 0.911 43 H 0.044 0.956 44 H 0.045 0.955 45 H 0.112 0.888 46 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.982 -1.251 3.955 4.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.222 6.222 3 C 0.319 3.681 4 O -0.394 6.394 5 C 0.067 3.933 6 N -0.368 5.368 7 C 0.333 3.667 8 O -0.375 6.375 9 C -0.232 4.232 10 C -0.034 4.034 11 C -0.073 4.073 12 C -0.110 4.110 13 C -0.112 4.112 14 C -0.061 4.061 15 C -0.189 4.189 16 O -0.343 6.343 17 Si 0.585 3.415 18 C -0.135 4.135 19 C -0.113 4.113 20 C -0.155 4.155 21 C 0.008 3.992 22 H 0.122 0.878 23 O -0.290 6.290 24 C -0.068 4.068 25 C -0.182 4.182 26 H 0.078 0.922 27 H 0.080 0.920 28 H 0.119 0.881 29 H 0.245 0.755 30 H 0.148 0.852 31 H 0.156 0.844 32 H 0.150 0.850 33 H 0.146 0.854 34 H 0.096 0.904 35 H 0.229 0.771 36 H -0.186 1.186 37 H -0.179 1.179 38 H 0.148 0.852 39 H 0.150 0.850 40 H 0.113 0.887 41 H 0.132 0.868 42 H 0.107 0.893 43 H 0.062 0.938 44 H 0.064 0.936 45 H 0.131 0.869 46 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.892 -0.597 3.352 3.520 hybrid contribution 0.243 -0.927 -0.404 1.040 sum 1.135 -1.524 2.948 3.508 Atomic orbital electron populations 1.23327 0.77366 1.03777 1.02136 1.87018 1.22338 1.30701 1.82174 1.23070 0.90343 0.82352 0.72373 1.90687 1.66167 1.36655 1.45880 1.20951 0.86656 0.86964 0.98770 1.45719 1.43325 1.04272 1.43478 1.18354 0.82292 0.83274 0.82778 1.90874 1.30176 1.86038 1.30398 1.22813 1.03959 0.92278 1.04114 1.22379 0.95049 0.90640 0.95298 1.19055 0.97587 0.93039 0.97618 1.21437 0.99158 0.91348 0.99087 1.20971 0.95650 0.99103 0.95502 1.19415 0.96393 0.93014 0.97277 1.24850 1.00330 0.95211 0.98505 1.86594 1.67933 1.43483 1.36259 0.95036 0.82203 0.82826 0.81449 1.20931 1.00249 0.91889 1.00415 1.21330 0.95495 0.98794 0.95672 1.23496 1.03214 0.90877 0.97945 1.23596 0.91175 0.89953 0.94511 0.87808 1.87914 1.33541 1.45930 1.61658 1.22860 1.01995 0.90387 0.91604 1.23952 1.03123 0.95822 0.95289 0.92210 0.92001 0.88086 0.75467 0.85210 0.84431 0.85040 0.85360 0.90410 0.77134 1.18609 1.17911 0.85235 0.84960 0.88722 0.86760 0.89261 0.93771 0.93588 0.86934 0.89930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.31 -1.26 6.30 -47.61 -0.30 -1.56 16 3 C 0.48 1.76 6.98 36.00 0.25 2.01 16 4 O -0.51 -2.67 14.99 -18.75 -0.28 -2.95 16 5 C 0.16 0.15 1.22 -132.16 -0.16 -0.01 16 6 N -0.71 0.45 5.31 -49.30 -0.26 0.18 16 7 C 0.54 0.77 7.09 -12.97 -0.09 0.68 16 8 O -0.50 -2.37 12.76 -20.04 -0.26 -2.62 16 9 C -0.21 0.14 9.41 -37.51 -0.35 -0.21 16 10 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 11 C -0.07 -0.01 5.87 -105.06 -0.62 -0.62 16 12 C -0.09 -0.01 9.80 -39.11 -0.38 -0.40 16 13 C -0.09 -0.05 9.66 -39.65 -0.38 -0.44 16 14 C -0.06 -0.03 5.40 -104.50 -0.56 -0.60 16 15 C -0.08 0.05 2.79 36.01 0.10 0.15 16 16 O -0.54 -0.42 12.81 -35.23 -0.45 -0.87 16 17 Si 0.68 -1.01 29.83 -169.99 -5.07 -6.08 16 18 C -0.12 0.03 8.65 -39.65 -0.34 -0.31 16 19 C -0.10 0.07 9.41 -39.11 -0.37 -0.30 16 20 C -0.12 0.06 6.96 -25.92 -0.18 -0.12 16 21 C 0.07 0.06 3.90 -25.83 -0.10 -0.04 16 22 H 0.10 0.16 7.05 -51.93 -0.37 -0.21 16 23 O -0.37 -0.61 10.72 -35.23 -0.38 -0.99 16 24 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 25 C -0.14 -0.14 7.30 -25.83 -0.19 -0.32 16 26 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 27 H 0.06 0.11 8.13 -51.92 -0.42 -0.32 16 28 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.41 -1.55 8.62 -40.82 -0.35 -1.90 16 30 H 0.13 -0.44 6.07 -52.49 -0.32 -0.76 16 31 H 0.14 0.07 7.52 -52.49 -0.39 -0.32 16 32 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 33 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 34 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 35 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 36 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 37 H -0.25 -0.39 7.05 56.52 0.40 0.01 16 38 H 0.13 -0.25 4.84 -52.48 -0.25 -0.51 16 39 H 0.13 -0.41 6.17 -52.48 -0.32 -0.73 16 40 H 0.09 -0.02 7.85 -51.93 -0.41 -0.43 16 41 H 0.11 -0.26 8.13 -51.92 -0.42 -0.68 16 42 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 44 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 45 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 46 H 0.08 0.16 8.09 -51.93 -0.42 -0.26 16 LS Contribution 386.29 15.07 5.82 5.82 Total: 0.00 -9.72 386.29 -9.03 -18.74 By element: Atomic # 1 Polarization: -4.72 SS G_CDS: -6.28 Total: -11.00 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: -1.57 Total: 1.32 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.26 Total: 0.18 kcal Atomic # 8 Polarization: -7.32 SS G_CDS: -1.67 Total: -8.99 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.07 Total: -6.08 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -9.72 -9.03 -18.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.659 kcal (2) G-P(sol) polarization free energy of solvation -9.717 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.743 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds