Wall clock time and date at job start Sun Mar 7 2021 00:14:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34229 * 117.00676 * 2 1 4 4 O 1.20829 * 119.99484 * 359.97438 * 3 2 1 5 5 C 1.50691 * 120.00475 * 180.02562 * 3 2 1 6 6 N 1.46507 * 112.84753 * 334.66613 * 5 3 2 7 7 C 1.34774 * 120.00451 * 50.33284 * 6 5 3 8 8 O 1.21694 * 119.99324 * 359.97438 * 7 6 5 9 9 C 1.46419 * 120.00308 * 180.02562 * 7 6 5 10 10 C 1.34811 * 120.00202 * 180.02562 * 9 7 6 11 11 C 1.47206 * 119.99958 * 180.02562 * 10 9 7 12 12 C 1.39841 * 120.16364 * 180.02562 * 11 10 9 13 13 C 1.37898 * 119.81974 * 180.02562 * 12 11 10 14 14 C 1.38401 * 120.17294 * 0.02562 * 13 12 11 15 15 C 1.50699 * 119.82733 * 179.97438 * 14 13 12 16 16 O 1.42905 * 109.46972 * 65.00339 * 15 14 13 17 17 Si 1.86295 * 109.47097 * 184.99978 * 15 14 13 18 18 C 1.38403 * 120.34356 * 0.23234 * 14 13 12 19 19 C 1.37889 * 120.17024 * 359.49281 * 18 14 13 20 20 C 1.53777 * 113.61633 * 203.46731 * 5 3 2 21 21 C 1.53779 * 87.08202 * 270.79713 * 20 5 3 22 22 H 1.09002 * 113.61277 * 89.11686 * 21 20 5 23 23 O 1.42900 * 113.61209 * 219.93286 * 21 20 5 24 24 C 1.42898 * 113.99919 * 209.99995 * 23 21 20 25 25 C 1.53782 * 113.61786 * 105.85772 * 5 3 2 26 26 H 1.09005 * 109.47032 * 300.00811 * 1 2 3 27 27 H 1.09008 * 109.46937 * 60.00051 * 1 2 3 28 28 H 1.08997 * 109.47661 * 179.97438 * 1 2 3 29 29 H 0.97001 * 119.99357 * 230.33570 * 6 5 3 30 30 H 1.08002 * 119.99990 * 359.97438 * 9 7 6 31 31 H 1.08000 * 119.99542 * 359.97438 * 10 9 7 32 32 H 1.07998 * 120.09239 * 0.03911 * 12 11 10 33 33 H 1.07997 * 119.91161 * 180.02562 * 13 12 11 34 34 H 1.09000 * 109.47247 * 305.00274 * 15 14 13 35 35 H 0.96696 * 114.00036 * 179.97438 * 16 15 14 36 36 H 1.48504 * 110.00018 * 178.68145 * 17 15 14 37 37 H 1.48496 * 110.00262 * 300.00047 * 17 15 14 38 38 H 1.08007 * 119.91301 * 179.74007 * 18 14 13 39 39 H 1.08008 * 120.08512 * 180.24810 * 19 18 14 40 40 H 1.09001 * 113.61367 * 25.35070 * 20 5 3 41 41 H 1.09011 * 113.61394 * 156.16413 * 20 5 3 42 42 H 1.08994 * 109.47377 * 180.02562 * 24 23 21 43 43 H 1.09004 * 109.47352 * 300.00225 * 24 23 21 44 44 H 1.09004 * 109.47494 * 59.99866 * 24 23 21 45 45 H 1.09004 * 113.61515 * 203.75292 * 25 5 3 46 46 H 1.08998 * 113.61278 * 334.65533 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 7 4.1985 0.0857 0.5766 7 6 3.8372 -1.1420 0.1540 8 8 2.9854 -1.2628 -0.7067 9 6 4.4685 -2.3302 0.7313 10 6 4.1075 -3.5582 0.3083 11 6 4.7419 -4.7529 0.8891 12 6 4.3703 -6.0283 0.4524 13 6 4.9688 -7.1426 1.0017 14 6 5.9344 -7.0010 1.9831 15 6 6.5830 -8.2240 2.5785 16 8 7.3376 -8.9011 1.5713 17 14 7.7170 -7.7127 3.9653 18 6 6.3036 -5.7422 2.4243 19 6 5.7184 -4.6181 1.8807 20 6 4.1142 2.5975 0.5606 21 6 4.0338 3.1480 -0.8731 22 1 3.0730 3.6037 -1.1125 23 8 5.1441 3.9725 -1.2327 24 6 4.8282 4.9897 -2.1853 25 6 4.1609 1.6917 -1.3561 26 1 -0.3633 0.5140 0.8900 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 4.8771 0.1822 1.2630 30 1 5.2241 -2.2229 1.4955 31 1 3.3522 -3.6655 -0.4562 32 1 3.6169 -6.1404 -0.3132 33 1 4.6833 -8.1283 0.6653 34 1 5.8132 -8.8914 2.9659 35 1 7.7839 -9.6997 1.8845 36 1 8.3385 -8.9123 4.5817 37 1 8.7712 -6.8026 3.4501 38 1 7.0549 -5.6399 3.1935 39 1 6.0104 -3.6363 2.2232 40 1 3.4357 3.0909 1.2565 41 1 5.1318 2.5211 0.9440 42 1 5.7231 5.5715 -2.4060 43 1 4.4604 4.5279 -3.1016 44 1 4.0600 5.6456 -1.7753 45 1 5.1918 1.3675 -1.4991 46 1 3.5200 1.4549 -2.2054 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:23 Heat of formation + Delta-G solvation = -101.028500 kcal Electronic energy + Delta-G solvation = -30142.095583 eV Core-core repulsion = 25773.023371 eV Total energy + Delta-G solvation = -4369.072212 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.150 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.54781 -40.69224 -40.32696 -39.84061 -37.87525 -37.77842 -37.05447 -35.09980 -34.20719 -32.18343 -31.30742 -29.27069 -27.95129 -27.31367 -27.06878 -25.90009 -24.18002 -23.88300 -22.97480 -21.82884 -20.79486 -20.33965 -19.16252 -18.69550 -18.55267 -17.92863 -17.65602 -17.42234 -17.23416 -16.92512 -16.61792 -16.20959 -16.12167 -15.70673 -15.43052 -15.22489 -15.15019 -14.98256 -14.56807 -14.48409 -14.27804 -14.00668 -13.85622 -13.73271 -13.60487 -13.53847 -13.27151 -13.07501 -12.93001 -12.53607 -12.29587 -12.23975 -12.18039 -12.02021 -11.82033 -11.70130 -11.65391 -11.24405 -10.85787 -10.61442 -10.48546 -10.25173 -9.94995 -9.20082 -4.92067 -0.49515 0.42668 0.84133 0.96451 1.30567 1.59319 1.60963 1.95222 1.95859 2.30635 2.81016 2.82020 2.98315 3.22558 3.39519 3.47200 3.58329 3.65057 3.79191 3.87047 3.97196 3.99147 4.18709 4.23334 4.24405 4.27433 4.35054 4.41507 4.42234 4.47241 4.51086 4.55689 4.58938 4.61982 4.67807 4.73183 4.79882 4.85697 4.87544 5.00786 5.13447 5.19863 5.24964 5.30116 5.43329 5.51378 5.64451 5.92770 6.12815 6.51721 6.56420 6.57024 7.26482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.320 6.320 3 C 0.471 3.529 4 O -0.529 6.529 5 C 0.155 3.845 6 N -0.698 5.698 7 C 0.539 3.461 8 O -0.539 6.539 9 C -0.202 4.202 10 C -0.020 4.020 11 C -0.080 4.080 12 C -0.103 4.103 13 C -0.109 4.109 14 C -0.076 4.076 15 C -0.091 4.091 16 O -0.559 6.559 17 Si 0.767 3.233 18 C -0.126 4.126 19 C -0.095 4.095 20 C -0.105 4.105 21 C 0.064 3.936 22 H 0.092 0.908 23 O -0.384 6.384 24 C 0.022 3.978 25 C -0.140 4.140 26 H 0.063 0.937 27 H 0.057 0.943 28 H 0.117 0.883 29 H 0.427 0.573 30 H 0.163 0.837 31 H 0.125 0.875 32 H 0.139 0.861 33 H 0.130 0.870 34 H 0.094 0.906 35 H 0.395 0.605 36 H -0.290 1.290 37 H -0.295 1.295 38 H 0.145 0.855 39 H 0.159 0.841 40 H 0.093 0.907 41 H 0.139 0.861 42 H 0.101 0.899 43 H 0.045 0.955 44 H 0.049 0.951 45 H 0.121 0.879 46 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.016 -1.003 5.240 5.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.234 6.234 3 C 0.313 3.687 4 O -0.419 6.419 5 C 0.065 3.935 6 N -0.354 5.354 7 C 0.329 3.671 8 O -0.417 6.417 9 C -0.223 4.223 10 C -0.039 4.039 11 C -0.080 4.080 12 C -0.121 4.121 13 C -0.127 4.127 14 C -0.077 4.077 15 C -0.199 4.199 16 O -0.369 6.369 17 Si 0.672 3.328 18 C -0.143 4.143 19 C -0.113 4.113 20 C -0.142 4.142 21 C 0.005 3.995 22 H 0.110 0.890 23 O -0.302 6.302 24 C -0.074 4.074 25 C -0.179 4.179 26 H 0.082 0.918 27 H 0.075 0.925 28 H 0.136 0.864 29 H 0.266 0.734 30 H 0.180 0.820 31 H 0.143 0.857 32 H 0.157 0.843 33 H 0.148 0.852 34 H 0.112 0.888 35 H 0.245 0.755 36 H -0.217 1.217 37 H -0.222 1.222 38 H 0.162 0.838 39 H 0.177 0.823 40 H 0.112 0.888 41 H 0.157 0.843 42 H 0.119 0.881 43 H 0.064 0.936 44 H 0.068 0.932 45 H 0.140 0.860 46 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.930 -0.356 4.661 5.057 hybrid contribution -0.089 -1.018 -0.862 1.337 sum 1.841 -1.374 3.799 4.439 Atomic orbital electron populations 1.23479 0.76602 1.04912 1.02114 1.87029 1.23333 1.31007 1.81999 1.23638 0.91491 0.81935 0.71610 1.90664 1.66968 1.37218 1.47023 1.20909 0.85168 0.88161 0.99234 1.45586 1.43153 1.03252 1.43416 1.18745 0.81841 0.84227 0.82305 1.90862 1.31994 1.86611 1.32208 1.22927 1.04096 0.90928 1.04318 1.22313 0.95129 0.91122 0.95378 1.19127 0.98006 0.92807 0.98035 1.21621 0.99480 0.91583 0.99416 1.21097 0.96176 0.99363 0.96052 1.19677 0.96561 0.93901 0.97516 1.25099 1.01103 0.95318 0.98428 1.86548 1.68376 1.44509 1.37478 0.94117 0.79589 0.79678 0.79384 1.21164 1.00563 0.91759 1.00823 1.21644 0.94718 0.99961 0.94959 1.23499 1.04384 0.89341 0.97001 1.23564 0.90605 0.89710 0.95587 0.88990 1.87883 1.33869 1.46369 1.62125 1.22999 1.02795 0.90239 0.91392 1.23938 1.03168 0.96030 0.94769 0.91794 0.92456 0.86434 0.73358 0.82014 0.85682 0.84329 0.85226 0.88774 0.75490 1.21721 1.22214 0.83811 0.82319 0.88837 0.84286 0.88054 0.93620 0.93219 0.86050 0.91513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.10 10.56 113.37 1.20 1.30 16 2 O -0.32 -2.93 6.30 -43.42 -0.27 -3.20 16 3 C 0.47 3.90 6.98 71.23 0.50 4.39 16 4 O -0.53 -6.26 14.99 21.96 0.33 -5.93 16 5 C 0.15 0.28 1.22 3.38 0.00 0.28 16 6 N -0.70 1.57 5.31 -428.12 -2.27 -0.70 16 7 C 0.54 1.35 7.09 86.37 0.61 1.96 16 8 O -0.54 -5.58 12.76 19.80 0.25 -5.32 16 9 C -0.20 0.51 9.41 23.61 0.22 0.73 16 10 C -0.02 0.00 9.46 23.84 0.23 0.23 16 11 C -0.08 0.01 5.87 -20.15 -0.12 -0.11 16 12 C -0.10 -0.09 9.80 22.58 0.22 0.13 16 13 C -0.11 -0.18 9.66 22.23 0.21 0.03 16 14 C -0.08 -0.08 5.40 -19.79 -0.11 -0.18 16 15 C -0.09 0.14 2.79 71.24 0.20 0.34 16 16 O -0.56 -0.95 12.81 -148.98 -1.91 -2.86 16 17 Si 0.77 -2.58 29.83 68.60 2.05 -0.54 16 18 C -0.13 0.18 8.65 22.23 0.19 0.37 16 19 C -0.10 0.25 9.41 22.57 0.21 0.47 16 20 C -0.10 0.18 6.96 31.12 0.22 0.40 16 21 C 0.06 0.13 3.90 31.18 0.12 0.25 16 22 H 0.09 0.39 7.05 -2.39 -0.02 0.37 16 23 O -0.38 -1.14 10.72 -148.98 -1.60 -2.74 16 24 C 0.02 -0.01 10.85 113.37 1.23 1.22 16 25 C -0.14 -0.32 7.30 31.18 0.23 -0.09 16 26 H 0.06 0.21 8.13 -2.38 -0.02 0.19 16 27 H 0.06 0.29 8.13 -2.38 -0.02 0.27 16 28 H 0.12 0.05 8.14 -2.39 -0.02 0.03 16 29 H 0.43 -4.15 8.62 -92.71 -0.80 -4.95 16 30 H 0.16 -1.57 6.07 -2.91 -0.02 -1.58 16 31 H 0.13 0.29 7.52 -2.91 -0.02 0.26 16 32 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 33 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 34 H 0.09 -0.49 7.96 -2.39 -0.02 -0.51 16 35 H 0.39 -2.44 8.74 -74.06 -0.65 -3.09 16 36 H -0.29 -0.37 7.11 99.48 0.71 0.34 16 37 H -0.29 -0.96 7.05 99.48 0.70 -0.26 16 38 H 0.14 -0.73 4.84 -2.91 -0.01 -0.75 16 39 H 0.16 -1.42 6.17 -2.91 -0.02 -1.44 16 40 H 0.09 -0.09 7.85 -2.39 -0.02 -0.11 16 41 H 0.14 -0.95 8.13 -2.38 -0.02 -0.97 16 42 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 43 H 0.05 -0.05 8.14 -2.38 -0.02 -0.07 16 44 H 0.05 -0.08 8.14 -2.38 -0.02 -0.10 16 45 H 0.12 0.04 8.14 -2.38 -0.02 0.02 16 46 H 0.07 0.36 8.09 -2.39 -0.02 0.34 16 Total: 0.00 -23.76 386.29 1.56 -22.21 By element: Atomic # 1 Polarization: -12.23 SS G_CDS: -0.39 Total: -12.62 kcal Atomic # 6 Polarization: 6.34 SS G_CDS: 5.37 Total: 11.71 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -2.27 Total: -0.70 kcal Atomic # 8 Polarization: -16.86 SS G_CDS: -3.20 Total: -20.06 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.05 Total: -0.54 kcal Total: -23.76 1.56 -22.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.823 kcal (2) G-P(sol) polarization free energy of solvation -23.761 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.205 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds