Wall clock time and date at job start Sun Mar 7 2021 00:14:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34227 * 117.00370 * 2 1 4 4 O 1.20828 * 120.00085 * 359.97438 * 3 2 1 5 5 C 1.50702 * 120.00151 * 179.97438 * 3 2 1 6 6 N 1.46491 * 112.85066 * 35.49207 * 5 3 2 7 7 C 1.34783 * 119.99893 * 66.98914 * 6 5 3 8 8 O 1.21591 * 120.00097 * 354.93608 * 7 6 5 9 9 C 1.47533 * 120.00297 * 174.92892 * 7 6 5 10 10 C 1.40132 * 120.19525 * 179.97438 * 9 7 6 11 11 O 1.35658 * 120.14827 * 359.97438 * 10 9 7 12 12 C 1.42894 * 116.99965 * 180.02562 * 11 10 9 13 13 C 1.38713 * 119.70384 * 180.02562 * 10 9 7 14 14 C 1.38058 * 120.08054 * 0.02562 * 13 10 9 15 15 C 1.38548 * 120.38989 * 359.97438 * 14 13 10 16 16 C 1.50706 * 119.84843 * 180.28354 * 15 14 13 17 17 O 1.42899 * 109.46940 * 119.72953 * 16 15 14 18 18 Si 1.86295 * 109.46803 * 359.72492 * 16 15 14 19 19 C 1.37783 * 120.30419 * 0.02562 * 15 14 13 20 20 C 1.53789 * 113.69128 * 264.22504 * 5 3 2 21 21 C 1.53781 * 87.07934 * 220.00870 * 20 5 3 22 22 H 1.09006 * 113.68865 * 139.99186 * 21 20 5 23 23 O 1.42898 * 113.61300 * 270.88032 * 21 20 5 24 24 C 1.42898 * 114.00257 * 247.49734 * 23 21 20 25 25 C 1.53783 * 87.08393 * 25.43430 * 21 20 5 26 26 H 1.08999 * 109.47506 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47153 * 300.00516 * 1 2 3 28 28 H 1.09001 * 109.46652 * 59.99642 * 1 2 3 29 29 H 0.97001 * 120.00612 * 246.98813 * 6 5 3 30 30 H 1.08994 * 109.47454 * 180.02562 * 12 11 10 31 31 H 1.09000 * 109.47166 * 299.99787 * 12 11 10 32 32 H 1.09001 * 109.47391 * 59.99567 * 12 11 10 33 33 H 1.07996 * 119.95831 * 179.97438 * 13 10 9 34 34 H 1.08000 * 119.80262 * 180.02562 * 14 13 10 35 35 H 1.09003 * 109.46908 * 239.73063 * 16 15 14 36 36 H 0.96705 * 113.99727 * 299.99348 * 17 16 15 37 37 H 1.48508 * 109.99906 * 180.02562 * 18 16 15 38 38 H 1.48493 * 110.00564 * 301.32176 * 18 16 15 39 39 H 1.08001 * 120.05191 * 179.97438 * 19 15 14 40 40 H 1.08996 * 113.61372 * 334.55855 * 20 5 3 41 41 H 1.08994 * 113.61218 * 105.45965 * 20 5 3 42 42 H 1.09003 * 109.47218 * 179.97438 * 24 23 21 43 43 H 1.09000 * 109.47539 * 300.00792 * 24 23 21 44 44 H 1.09006 * 109.46824 * 60.00524 * 24 23 21 45 45 H 1.09000 * 113.61240 * 220.01925 * 25 21 20 46 46 H 1.08996 * 113.69081 * 89.12564 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 0.0006 6 7 4.1923 0.2067 -0.7827 7 6 4.0356 0.1721 -2.1210 8 8 3.3009 0.9717 -2.6680 9 6 4.7557 -0.8360 -2.9222 10 6 4.5953 -0.8760 -4.3137 11 8 3.7764 0.0121 -4.9310 12 6 3.6623 -0.0897 -6.3517 13 6 5.2769 -1.8284 -5.0570 14 6 6.1087 -2.7325 -4.4272 15 6 6.2699 -2.6962 -3.0516 16 6 7.1860 -3.6849 -2.3774 17 8 8.2265 -2.9818 -1.6955 18 14 7.9340 -4.8118 -3.6585 19 6 5.6007 -1.7569 -2.2978 20 6 4.1755 1.4489 1.4019 21 6 5.1715 2.4297 0.7611 22 1 5.3799 3.3059 1.3752 23 8 6.3574 1.8019 0.2696 24 6 7.5414 2.1521 0.9889 25 6 4.1099 2.6763 -0.3238 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 4.7195 -0.4756 -0.3384 30 1 2.9793 0.6770 -6.7173 31 1 4.6430 0.0515 -6.8061 32 1 3.2781 -1.0750 -6.6158 33 1 5.1560 -1.8632 -6.1297 34 1 6.6375 -3.4718 -5.0104 35 1 6.6170 -4.2769 -1.6605 36 1 8.7745 -2.4331 -2.2732 37 1 8.8390 -5.7921 -3.0063 38 1 6.8608 -5.5250 -4.3964 39 1 5.7290 -1.7326 -1.2257 40 1 3.4994 1.9178 2.1167 41 1 4.6425 0.5439 1.7905 42 1 8.3968 1.6344 0.5548 43 1 7.6986 3.2290 0.9277 44 1 7.4320 1.8597 2.0333 45 1 4.5241 2.7622 -1.3284 46 1 3.4153 3.4807 -0.0822 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:31 Heat of formation + Delta-G solvation = -151.390831 kcal Electronic energy + Delta-G solvation = -33289.269503 eV Core-core repulsion = 28727.557364 eV Total energy + Delta-G solvation = -4561.712138 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.35919 -41.46832 -40.31459 -39.33427 -39.15782 -37.50405 -37.13348 -36.79438 -34.19692 -32.39400 -31.78814 -29.24229 -28.56298 -27.81183 -27.04788 -26.49920 -26.18146 -24.97446 -22.84571 -22.47871 -21.46660 -20.33824 -19.50304 -18.94852 -18.40395 -18.03438 -17.96801 -17.38449 -17.19469 -16.99350 -16.80044 -16.60010 -16.21204 -16.09282 -15.88842 -15.86729 -15.51224 -15.39052 -14.76981 -14.64161 -14.55059 -14.40428 -14.10670 -13.78854 -13.65889 -13.46339 -13.31933 -13.25020 -13.10093 -12.88966 -12.50998 -12.42090 -12.11843 -12.09398 -12.06962 -11.98849 -11.79611 -11.61886 -11.39603 -10.80252 -10.64943 -10.40859 -10.19257 -10.00088 -9.23976 -5.09724 -0.21267 0.23710 1.22138 1.24391 1.56632 1.73041 1.91969 1.99118 2.01840 2.25410 2.56773 2.76784 3.24717 3.27023 3.39121 3.50899 3.55666 3.63580 3.70411 3.82506 3.98968 4.07313 4.18794 4.22353 4.22816 4.28078 4.34445 4.37423 4.38617 4.40567 4.44824 4.50841 4.54365 4.59721 4.67372 4.68819 4.71095 4.78414 4.78796 4.92006 5.02822 5.09492 5.27244 5.41134 5.52136 5.54121 6.14621 6.31355 6.53008 6.54821 6.87414 7.35317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.352 6.352 3 C 0.473 3.527 4 O -0.497 6.497 5 C 0.167 3.833 6 N -0.693 5.693 7 C 0.569 3.431 8 O -0.509 6.509 9 C -0.169 4.169 10 C 0.193 3.807 11 O -0.279 6.279 12 C 0.019 3.981 13 C -0.215 4.215 14 C -0.047 4.047 15 C -0.169 4.169 16 C -0.061 4.061 17 O -0.540 6.540 18 Si 0.685 3.315 19 C -0.015 4.015 20 C -0.145 4.145 21 C 0.068 3.932 22 H 0.090 0.910 23 O -0.361 6.361 24 C 0.029 3.971 25 C -0.122 4.122 26 H 0.101 0.899 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.407 0.593 30 H 0.104 0.896 31 H 0.059 0.941 32 H 0.058 0.942 33 H 0.141 0.859 34 H 0.133 0.867 35 H 0.115 0.885 36 H 0.379 0.621 37 H -0.254 1.254 38 H -0.258 1.258 39 H 0.137 0.863 40 H 0.113 0.887 41 H 0.096 0.904 42 H 0.090 0.910 43 H 0.044 0.956 44 H 0.044 0.956 45 H 0.095 0.905 46 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.721 -1.912 -0.326 5.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.268 6.268 3 C 0.314 3.686 4 O -0.383 6.383 5 C 0.077 3.923 6 N -0.349 5.349 7 C 0.357 3.643 8 O -0.384 6.384 9 C -0.173 4.173 10 C 0.144 3.856 11 O -0.189 6.189 12 C -0.076 4.076 13 C -0.233 4.233 14 C -0.065 4.065 15 C -0.170 4.170 16 C -0.172 4.172 17 O -0.345 6.345 18 Si 0.587 3.413 19 C -0.033 4.033 20 C -0.183 4.183 21 C 0.009 3.991 22 H 0.108 0.892 23 O -0.279 6.279 24 C -0.068 4.068 25 C -0.160 4.160 26 H 0.119 0.881 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.245 0.755 30 H 0.123 0.877 31 H 0.078 0.922 32 H 0.076 0.924 33 H 0.158 0.842 34 H 0.150 0.850 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.179 1.179 38 H -0.183 1.183 39 H 0.154 0.846 40 H 0.131 0.869 41 H 0.114 0.886 42 H 0.108 0.892 43 H 0.063 0.937 44 H 0.062 0.938 45 H 0.114 0.886 46 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 3.653 -2.121 -0.591 4.265 hybrid contribution -0.441 -0.263 0.511 0.724 sum 3.212 -2.384 -0.080 4.001 Atomic orbital electron populations 1.23296 0.76244 1.03779 1.02635 1.86517 1.23468 1.33250 1.83592 1.23735 0.91319 0.81654 0.71920 1.90666 1.66270 1.36423 1.44971 1.21014 0.84599 0.91286 0.95374 1.45301 1.54135 1.29071 1.06363 1.17933 0.81121 0.83899 0.81339 1.90871 1.36565 1.40098 1.70887 1.19213 1.05432 1.01707 0.90977 1.19081 0.87943 0.87685 0.90859 1.86387 1.59873 1.50870 1.21814 1.23226 1.02589 1.03283 0.78500 1.21213 1.02642 0.98647 1.00816 1.20985 0.95432 0.96485 0.93613 1.20114 1.02720 1.00518 0.93662 1.24946 0.90336 0.98427 1.03508 1.86500 1.44899 1.65048 1.38065 0.94804 0.83687 0.81181 0.81589 1.20969 0.91262 0.91167 0.99933 1.23815 0.98703 1.02334 0.93452 1.22987 0.85490 0.94949 0.95658 0.89179 1.87939 1.14707 1.68922 1.56348 1.22879 0.87315 1.00195 0.96371 1.23573 0.96526 0.94250 1.01665 0.88071 0.91818 0.91768 0.75531 0.87727 0.92248 0.92382 0.84172 0.84953 0.86811 0.77314 1.17861 1.18280 0.84581 0.86912 0.88570 0.89182 0.93709 0.93767 0.88600 0.86280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.13 16 2 O -0.35 -1.54 10.41 -39.25 -0.41 -1.94 16 3 C 0.47 2.38 6.42 36.01 0.23 2.61 16 4 O -0.50 -3.62 15.66 -18.75 -0.29 -3.91 16 5 C 0.17 0.40 1.00 -132.15 -0.13 0.27 16 6 N -0.69 -1.40 4.47 -48.95 -0.22 -1.62 16 7 C 0.57 2.64 7.24 -12.47 -0.09 2.55 16 8 O -0.51 -4.22 13.88 -16.59 -0.23 -4.45 16 9 C -0.17 -0.48 5.89 -104.84 -0.62 -1.10 16 10 C 0.19 0.53 6.70 -38.70 -0.26 0.27 16 11 O -0.28 -1.12 8.57 -40.56 -0.35 -1.47 16 12 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 13 C -0.21 0.01 9.03 -39.47 -0.36 -0.35 16 14 C -0.05 0.05 8.66 -39.53 -0.34 -0.29 16 15 C -0.17 0.10 5.39 -104.67 -0.56 -0.46 16 16 C -0.06 0.08 2.81 36.01 0.10 0.18 16 17 O -0.54 0.59 12.76 -35.23 -0.45 0.14 16 18 Si 0.69 -1.34 29.77 -169.99 -5.06 -6.40 16 19 C -0.01 -0.01 9.08 -39.20 -0.36 -0.36 16 20 C -0.15 0.12 7.20 -25.91 -0.19 -0.07 16 21 C 0.07 -0.02 4.37 -25.92 -0.11 -0.14 16 22 H 0.09 -0.19 7.87 -51.93 -0.41 -0.60 16 23 O -0.36 -0.13 10.13 -35.23 -0.36 -0.49 16 24 C 0.03 -0.06 10.85 101.05 1.10 1.04 16 25 C -0.12 -0.27 6.67 -25.91 -0.17 -0.45 16 26 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 28 H 0.06 0.18 8.13 -51.93 -0.42 -0.24 16 29 H 0.41 -0.12 6.72 -40.82 -0.27 -0.40 16 30 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 32 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 33 H 0.14 -0.32 6.30 -52.49 -0.33 -0.65 16 34 H 0.13 -0.43 4.85 -52.49 -0.25 -0.68 16 35 H 0.11 -0.12 7.96 -51.93 -0.41 -0.54 16 36 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 37 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 38 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 39 H 0.14 -0.15 6.42 -52.49 -0.34 -0.49 16 40 H 0.11 -0.20 8.10 -51.93 -0.42 -0.62 16 41 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 42 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 44 H 0.04 -0.12 8.14 -51.93 -0.42 -0.55 16 45 H 0.10 0.41 7.41 -51.93 -0.38 0.02 16 46 H 0.12 0.27 7.34 -51.93 -0.38 -0.11 16 LS Contribution 383.61 15.07 5.78 5.78 Total: 0.00 -11.13 383.61 -7.47 -18.60 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -6.18 Total: -10.06 kcal Atomic # 6 Polarization: 5.53 SS G_CDS: 0.30 Total: 5.83 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -0.22 Total: -1.62 kcal Atomic # 8 Polarization: -10.04 SS G_CDS: -2.09 Total: -12.13 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.06 Total: -6.40 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -11.13 -7.47 -18.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.787 kcal (2) G-P(sol) polarization free energy of solvation -11.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds