Wall clock time and date at job start Sun Mar 7 2021 00:14:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34224 * 117.00145 * 2 1 4 4 O 1.20828 * 120.00362 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00112 * 179.97438 * 3 2 1 6 6 N 1.46496 * 112.85008 * 324.07613 * 5 3 2 7 7 C 1.34780 * 119.99668 * 293.63712 * 6 5 3 8 8 O 1.21566 * 120.00181 * 354.96994 * 7 6 5 9 9 C 1.47728 * 119.99883 * 174.97171 * 7 6 5 10 10 C 1.39632 * 120.11741 * 180.29747 * 9 7 6 11 11 C 1.37861 * 119.87718 * 180.25008 * 10 9 7 12 12 C 1.50700 * 119.93440 * 179.75086 * 11 10 9 13 13 O 1.42905 * 109.46780 * 254.71831 * 12 11 10 14 14 Si 1.86306 * 109.46665 * 134.72703 * 12 11 10 15 15 C 1.38628 * 120.11963 * 359.47229 * 11 10 9 16 16 F 1.35102 * 119.88060 * 180.25665 * 15 11 10 17 17 C 1.38680 * 120.24053 * 0.23344 * 15 11 10 18 18 C 1.37817 * 120.11635 * 0.04103 * 17 15 11 19 19 C 1.53776 * 113.61812 * 192.87239 * 5 3 2 20 20 C 1.53782 * 87.08205 * 270.80427 * 19 5 3 21 21 H 1.08996 * 113.61345 * 89.11634 * 20 19 5 22 22 O 1.42904 * 113.61262 * 219.93307 * 20 19 5 23 23 C 1.42901 * 114.00053 * 210.00146 * 22 20 19 24 24 C 1.53781 * 87.08083 * 334.56631 * 20 19 5 25 25 H 1.09009 * 109.46685 * 299.99891 * 1 2 3 26 26 H 1.08994 * 109.47298 * 59.99311 * 1 2 3 27 27 H 1.08990 * 109.47223 * 180.02562 * 1 2 3 28 28 H 0.97002 * 120.00085 * 113.63982 * 6 5 3 29 29 H 1.07997 * 120.06025 * 359.97438 * 10 9 7 30 30 H 1.08988 * 109.47649 * 14.72399 * 12 11 10 31 31 H 0.96694 * 114.00288 * 300.00618 * 13 12 11 32 32 H 1.48499 * 110.00311 * 58.67921 * 14 12 11 33 33 H 1.48508 * 109.99557 * 179.97438 * 14 12 11 34 34 H 1.07993 * 119.94440 * 180.02562 * 17 15 11 35 35 H 1.08008 * 120.05798 * 180.02562 * 18 17 15 36 36 H 1.09007 * 113.61226 * 25.35237 * 19 5 3 37 37 H 1.08998 * 113.61827 * 156.25159 * 19 5 3 38 38 H 1.09007 * 109.46735 * 300.00226 * 23 22 20 39 39 H 1.08993 * 109.47411 * 59.99684 * 23 22 20 40 40 H 1.08995 * 109.46935 * 180.02562 * 23 22 20 41 41 H 1.09002 * 113.61376 * 270.88755 * 24 20 19 42 42 H 1.08995 * 113.61541 * 139.98372 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1913 0.2130 0.7931 7 6 4.0226 0.1818 2.1299 8 8 3.4294 1.0837 2.6890 9 6 4.5586 -0.9484 2.9159 10 6 4.3798 -0.9863 4.3002 11 6 4.8865 -2.0408 5.0294 12 6 4.6992 -2.0803 6.5242 13 8 5.9332 -1.7554 7.1676 14 14 4.1621 -3.7887 7.0378 15 6 5.5630 -3.0678 4.3895 16 9 6.0531 -4.1014 5.1083 17 6 5.7381 -3.0382 3.0141 18 6 5.2405 -1.9860 2.2762 19 6 4.1096 2.6788 0.3144 20 6 4.0445 2.9560 -1.1968 21 1 3.0867 3.3590 -1.5259 22 8 5.1592 3.7014 -1.6906 23 6 4.8541 4.5258 -2.8172 24 6 4.1770 1.4376 -1.4014 25 1 -0.3633 0.5139 0.8901 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3633 -1.0276 0.0005 28 1 4.7266 -0.4676 0.3558 29 1 3.8494 -0.1888 4.7992 30 1 3.9369 -1.3573 6.8141 31 1 6.6584 -2.3585 6.9549 32 1 5.1783 -4.7877 6.6200 33 1 3.9746 -3.8409 8.5101 34 1 6.2655 -3.8409 2.5205 35 1 5.3771 -1.9641 1.2050 36 1 3.4243 3.2911 0.9006 37 1 5.1235 2.6753 0.7144 38 1 4.4953 3.9028 -3.6367 39 1 4.0824 5.2450 -2.5429 40 1 5.7518 5.0578 -3.1319 41 1 5.2094 1.0948 -1.4704 42 1 3.5463 1.0480 -2.2004 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:34 Heat of formation + Delta-G solvation = -156.207755 kcal Electronic energy + Delta-G solvation = -30254.253811 eV Core-core repulsion = 25697.098631 eV Total energy + Delta-G solvation = -4557.155180 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.125 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.50073 -42.58475 -41.15605 -40.18027 -39.42719 -37.82596 -37.69412 -37.09202 -34.61349 -32.90172 -31.95892 -29.32051 -27.97046 -27.16585 -27.06506 -26.32896 -24.77092 -23.64771 -23.07496 -21.52868 -20.76083 -19.57826 -19.14077 -18.87652 -18.11424 -17.90523 -17.79880 -17.59520 -17.24793 -17.15180 -16.92191 -16.33612 -16.12163 -15.92050 -15.77533 -15.59888 -15.14203 -15.08590 -14.89940 -14.75508 -14.38011 -14.11649 -13.79290 -13.73786 -13.57660 -13.48514 -13.31303 -13.06454 -12.99196 -12.62313 -12.38588 -12.29087 -12.05054 -11.83260 -11.71530 -11.28208 -11.14827 -10.86234 -10.63413 -10.44686 -10.22757 -9.92105 -4.95936 -0.60779 -0.09721 0.94167 1.19550 1.38957 1.59192 1.62293 1.74164 2.00280 2.46709 2.73800 2.87187 2.99233 3.15861 3.17615 3.38162 3.39310 3.45434 3.46682 3.61762 3.77431 3.95710 4.00768 4.12211 4.21723 4.24562 4.30141 4.32206 4.40628 4.47743 4.49623 4.55264 4.60675 4.65397 4.71406 4.74645 4.76098 4.88922 4.93061 4.97723 5.07996 5.29128 5.47023 6.10381 6.17037 6.27359 6.61557 6.95528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.479 3.521 4 O -0.488 6.488 5 C 0.157 3.843 6 N -0.705 5.705 7 C 0.566 3.434 8 O -0.517 6.517 9 C -0.142 4.142 10 C -0.008 4.008 11 C -0.152 4.152 12 C -0.074 4.074 13 O -0.523 6.523 14 Si 0.675 3.325 15 C 0.121 3.879 16 F -0.122 7.122 17 C -0.152 4.152 18 C -0.053 4.053 19 C -0.111 4.111 20 C 0.065 3.935 21 H 0.102 0.898 22 O -0.370 6.370 23 C 0.027 3.973 24 C -0.142 4.142 25 H 0.066 0.934 26 H 0.065 0.935 27 H 0.105 0.895 28 H 0.408 0.592 29 H 0.151 0.849 30 H 0.124 0.876 31 H 0.375 0.625 32 H -0.230 1.230 33 H -0.259 1.259 34 H 0.148 0.852 35 H 0.140 0.860 36 H 0.097 0.903 37 H 0.110 0.890 38 H 0.044 0.956 39 H 0.046 0.954 40 H 0.089 0.911 41 H 0.118 0.882 42 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.200 -3.962 -5.989 7.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.319 3.681 4 O -0.374 6.374 5 C 0.068 3.932 6 N -0.360 5.360 7 C 0.353 3.647 8 O -0.393 6.393 9 C -0.145 4.145 10 C -0.027 4.027 11 C -0.153 4.153 12 C -0.183 4.183 13 O -0.329 6.329 14 Si 0.574 3.426 15 C 0.101 3.899 16 F -0.101 7.101 17 C -0.171 4.171 18 C -0.071 4.071 19 C -0.149 4.149 20 C 0.006 3.994 21 H 0.120 0.880 22 O -0.288 6.288 23 C -0.069 4.069 24 C -0.180 4.180 25 H 0.085 0.915 26 H 0.084 0.916 27 H 0.123 0.877 28 H 0.246 0.754 29 H 0.168 0.832 30 H 0.142 0.858 31 H 0.223 0.777 32 H -0.154 1.154 33 H -0.184 1.184 34 H 0.165 0.835 35 H 0.157 0.843 36 H 0.116 0.884 37 H 0.129 0.871 38 H 0.062 0.938 39 H 0.065 0.935 40 H 0.108 0.892 41 H 0.137 0.863 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.865 -3.290 -4.761 5.851 hybrid contribution 1.021 -0.310 -0.324 1.115 sum 0.156 -3.600 -5.084 6.232 Atomic orbital electron populations 1.23368 0.75560 1.04157 1.02886 1.86490 1.23910 1.32650 1.83572 1.23089 0.90531 0.81932 0.72531 1.90701 1.66029 1.36345 1.44276 1.21004 0.85919 0.90864 0.95416 1.45633 1.53475 1.30338 1.06579 1.18194 0.79209 0.85643 0.81615 1.90857 1.41078 1.37161 1.70195 1.19879 1.03921 0.96349 0.94396 1.21037 0.94044 0.95738 0.91845 1.20264 1.02118 0.95173 0.97727 1.24993 0.90606 1.14379 0.88318 1.86661 1.19702 1.55665 1.70880 0.95463 0.88666 0.75598 0.82865 1.17917 0.96724 0.85166 0.90081 1.91581 1.85523 1.56137 1.76837 1.21099 1.03273 1.00883 0.91798 1.21187 0.93996 0.91800 1.00140 1.23496 1.03402 0.91691 0.96350 1.23583 0.91063 0.90052 0.94725 0.88049 1.87946 1.33435 1.59603 1.47813 1.22876 1.02174 0.93922 0.87965 1.23866 1.03201 0.98148 0.92752 0.91546 0.91623 0.87667 0.75396 0.83169 0.85763 0.77693 1.15406 1.18444 0.83457 0.84276 0.88448 0.87125 0.93774 0.93549 0.89215 0.86344 0.89353 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.35 -0.54 10.42 -39.24 -0.41 -0.95 16 3 C 0.48 1.25 6.45 36.01 0.23 1.48 16 4 O -0.49 -2.47 15.12 -18.75 -0.28 -2.75 16 5 C 0.16 0.04 1.11 -132.16 -0.15 -0.11 16 6 N -0.71 0.86 5.07 -48.90 -0.25 0.61 16 7 C 0.57 0.71 7.42 -12.38 -0.09 0.62 16 8 O -0.52 -2.60 15.38 5.31 0.08 -2.52 16 9 C -0.14 0.06 5.87 -104.96 -0.62 -0.56 16 10 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 11 C -0.15 0.03 4.78 -104.62 -0.50 -0.47 16 12 C -0.07 0.00 2.81 36.01 0.10 0.10 16 13 O -0.52 -0.92 12.88 -35.23 -0.45 -1.37 16 14 Si 0.67 -0.25 30.81 -169.99 -5.24 -5.48 16 15 C 0.12 -0.07 6.62 -39.27 -0.26 -0.33 16 16 F -0.12 -0.06 12.57 2.25 0.03 -0.03 16 17 C -0.15 0.35 10.01 -39.57 -0.40 -0.04 16 18 C -0.05 0.15 9.53 -39.20 -0.37 -0.22 16 19 C -0.11 -0.15 6.15 -25.92 -0.16 -0.31 16 20 C 0.06 0.01 3.92 -25.92 -0.10 -0.09 16 21 H 0.10 0.05 7.35 -51.93 -0.38 -0.34 16 22 O -0.37 -0.42 10.72 -35.23 -0.38 -0.79 16 23 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 24 C -0.14 0.27 7.22 -25.92 -0.19 0.09 16 25 H 0.07 0.02 8.13 -51.92 -0.42 -0.40 16 26 H 0.07 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 28 H 0.41 -1.85 6.75 -40.82 -0.28 -2.13 16 29 H 0.15 0.07 7.58 -52.49 -0.40 -0.33 16 30 H 0.12 -0.11 7.76 -51.94 -0.40 -0.52 16 31 H 0.38 -0.29 8.41 45.56 0.38 0.09 16 32 H -0.23 -0.32 5.27 56.52 0.30 -0.02 16 33 H -0.26 -0.77 7.11 56.52 0.40 -0.36 16 34 H 0.15 -0.63 8.06 -52.49 -0.42 -1.05 16 35 H 0.14 -0.84 6.41 -52.48 -0.34 -1.18 16 36 H 0.10 0.32 7.64 -51.93 -0.40 -0.07 16 37 H 0.11 0.12 8.14 -51.93 -0.42 -0.31 16 38 H 0.04 -0.09 8.14 -51.92 -0.42 -0.51 16 39 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 42 H 0.09 -0.25 8.10 -51.93 -0.42 -0.68 16 LS Contribution 361.02 15.07 5.44 5.44 Total: 0.00 -9.39 361.02 -7.49 -16.88 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -5.33 Total: -10.95 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -0.70 Total: 1.93 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.25 Total: 0.61 kcal Atomic # 8 Polarization: -6.95 SS G_CDS: -1.44 Total: -8.39 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.03 Total: -0.03 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.24 Total: -5.48 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.39 -7.49 -16.88 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.323 kcal (2) G-P(sol) polarization free energy of solvation -9.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.884 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.208 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds