Wall clock time and date at job start Sun Mar 7 2021 00:14:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34224 * 117.00145 * 2 1 4 4 O 1.20828 * 120.00362 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00112 * 179.97438 * 3 2 1 6 6 N 1.46496 * 112.85008 * 324.07613 * 5 3 2 7 7 C 1.34780 * 119.99668 * 293.63712 * 6 5 3 8 8 O 1.21566 * 120.00181 * 354.96994 * 7 6 5 9 9 C 1.47728 * 119.99883 * 174.97171 * 7 6 5 10 10 C 1.39632 * 120.11741 * 180.29747 * 9 7 6 11 11 C 1.37861 * 119.87718 * 180.25008 * 10 9 7 12 12 C 1.50700 * 119.93440 * 179.75086 * 11 10 9 13 13 O 1.42905 * 109.46780 * 254.71831 * 12 11 10 14 14 Si 1.86306 * 109.46665 * 134.72703 * 12 11 10 15 15 C 1.38628 * 120.11963 * 359.47229 * 11 10 9 16 16 F 1.35102 * 119.88060 * 180.25665 * 15 11 10 17 17 C 1.38680 * 120.24053 * 0.23344 * 15 11 10 18 18 C 1.37817 * 120.11635 * 0.04103 * 17 15 11 19 19 C 1.53776 * 113.61812 * 192.87239 * 5 3 2 20 20 C 1.53782 * 87.08205 * 270.80427 * 19 5 3 21 21 H 1.08996 * 113.61345 * 89.11634 * 20 19 5 22 22 O 1.42904 * 113.61262 * 219.93307 * 20 19 5 23 23 C 1.42901 * 114.00053 * 210.00146 * 22 20 19 24 24 C 1.53781 * 87.08083 * 334.56631 * 20 19 5 25 25 H 1.09009 * 109.46685 * 299.99891 * 1 2 3 26 26 H 1.08994 * 109.47298 * 59.99311 * 1 2 3 27 27 H 1.08990 * 109.47223 * 180.02562 * 1 2 3 28 28 H 0.97002 * 120.00085 * 113.63982 * 6 5 3 29 29 H 1.07997 * 120.06025 * 359.97438 * 10 9 7 30 30 H 1.08988 * 109.47649 * 14.72399 * 12 11 10 31 31 H 0.96694 * 114.00288 * 300.00618 * 13 12 11 32 32 H 1.48499 * 110.00311 * 58.67921 * 14 12 11 33 33 H 1.48508 * 109.99557 * 179.97438 * 14 12 11 34 34 H 1.07993 * 119.94440 * 180.02562 * 17 15 11 35 35 H 1.08008 * 120.05798 * 180.02562 * 18 17 15 36 36 H 1.09007 * 113.61226 * 25.35237 * 19 5 3 37 37 H 1.08998 * 113.61827 * 156.25159 * 19 5 3 38 38 H 1.09007 * 109.46735 * 300.00226 * 23 22 20 39 39 H 1.08993 * 109.47411 * 59.99684 * 23 22 20 40 40 H 1.08995 * 109.46935 * 180.02562 * 23 22 20 41 41 H 1.09002 * 113.61376 * 270.88755 * 24 20 19 42 42 H 1.08995 * 113.61541 * 139.98372 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1913 0.2130 0.7931 7 6 4.0226 0.1818 2.1299 8 8 3.4294 1.0837 2.6890 9 6 4.5586 -0.9484 2.9159 10 6 4.3798 -0.9863 4.3002 11 6 4.8865 -2.0408 5.0294 12 6 4.6992 -2.0803 6.5242 13 8 5.9332 -1.7554 7.1676 14 14 4.1621 -3.7887 7.0378 15 6 5.5630 -3.0678 4.3895 16 9 6.0531 -4.1014 5.1083 17 6 5.7381 -3.0382 3.0141 18 6 5.2405 -1.9860 2.2762 19 6 4.1096 2.6788 0.3144 20 6 4.0445 2.9560 -1.1968 21 1 3.0867 3.3590 -1.5259 22 8 5.1592 3.7014 -1.6906 23 6 4.8541 4.5258 -2.8172 24 6 4.1770 1.4376 -1.4014 25 1 -0.3633 0.5139 0.8901 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3633 -1.0276 0.0005 28 1 4.7266 -0.4676 0.3558 29 1 3.8494 -0.1888 4.7992 30 1 3.9369 -1.3573 6.8141 31 1 6.6584 -2.3585 6.9549 32 1 5.1783 -4.7877 6.6200 33 1 3.9746 -3.8409 8.5101 34 1 6.2655 -3.8409 2.5205 35 1 5.3771 -1.9641 1.2050 36 1 3.4243 3.2911 0.9006 37 1 5.1235 2.6753 0.7144 38 1 4.4953 3.9028 -3.6367 39 1 4.0824 5.2450 -2.5429 40 1 5.7518 5.0578 -3.1319 41 1 5.2094 1.0948 -1.4704 42 1 3.5463 1.0480 -2.2004 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:33 Heat of formation + Delta-G solvation = -157.741693 kcal Electronic energy + Delta-G solvation = -30254.320328 eV Core-core repulsion = 25697.098631 eV Total energy + Delta-G solvation = -4557.221697 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.125 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.46593 -42.66119 -41.18565 -40.21078 -39.46525 -37.86958 -37.78249 -37.20649 -34.65471 -32.82680 -31.88435 -29.34127 -27.90455 -27.13649 -27.03009 -26.31449 -24.78753 -23.56116 -23.10761 -21.53594 -20.83472 -19.57105 -19.16942 -18.82967 -18.22454 -17.95075 -17.77112 -17.63547 -17.32840 -17.12713 -16.92497 -16.34587 -16.12564 -15.95644 -15.81070 -15.58948 -15.10811 -15.04394 -14.84736 -14.71981 -14.45638 -14.05081 -13.86442 -13.72118 -13.61670 -13.44463 -13.32565 -13.04781 -12.96612 -12.58197 -12.36880 -12.35198 -12.04731 -11.94287 -11.80992 -11.36086 -11.23986 -10.88153 -10.60892 -10.51187 -10.13055 -9.85712 -4.97214 -0.54106 0.02441 0.79941 1.18900 1.35295 1.57562 1.58041 1.74522 1.94839 2.52062 2.77407 2.96715 3.02752 3.16142 3.23157 3.40432 3.44781 3.46859 3.59492 3.62807 3.96091 3.97484 4.10404 4.20393 4.23999 4.32327 4.41119 4.47540 4.53833 4.55828 4.62929 4.63513 4.67473 4.74079 4.76850 4.79731 4.87619 4.90677 4.98689 5.07453 5.08704 5.19639 5.59204 6.14230 6.27059 6.31112 6.47791 6.96524 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.351 6.351 3 C 0.475 3.525 4 O -0.522 6.522 5 C 0.156 3.844 6 N -0.687 5.687 7 C 0.564 3.436 8 O -0.565 6.565 9 C -0.151 4.151 10 C -0.020 4.020 11 C -0.156 4.156 12 C -0.084 4.084 13 O -0.543 6.543 14 Si 0.750 3.250 15 C 0.112 3.888 16 F -0.130 7.130 17 C -0.145 4.145 18 C -0.035 4.035 19 C -0.117 4.117 20 C 0.063 3.937 21 H 0.093 0.907 22 O -0.386 6.386 23 C 0.021 3.979 24 C -0.120 4.120 25 H 0.052 0.948 26 H 0.068 0.932 27 H 0.135 0.865 28 H 0.427 0.573 29 H 0.137 0.863 30 H 0.128 0.872 31 H 0.384 0.616 32 H -0.250 1.250 33 H -0.308 1.308 34 H 0.174 0.826 35 H 0.178 0.822 36 H 0.066 0.934 37 H 0.111 0.889 38 H 0.057 0.943 39 H 0.043 0.957 40 H 0.098 0.902 41 H 0.143 0.857 42 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.781 -5.722 -8.297 10.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.266 6.266 3 C 0.317 3.683 4 O -0.410 6.410 5 C 0.067 3.933 6 N -0.343 5.343 7 C 0.353 3.647 8 O -0.443 6.443 9 C -0.154 4.154 10 C -0.039 4.039 11 C -0.157 4.157 12 C -0.192 4.192 13 O -0.351 6.351 14 Si 0.654 3.346 15 C 0.092 3.908 16 F -0.108 7.108 17 C -0.163 4.163 18 C -0.054 4.054 19 C -0.156 4.156 20 C 0.004 3.996 21 H 0.111 0.889 22 O -0.304 6.304 23 C -0.075 4.075 24 C -0.158 4.158 25 H 0.071 0.929 26 H 0.087 0.913 27 H 0.153 0.847 28 H 0.269 0.731 29 H 0.155 0.845 30 H 0.146 0.854 31 H 0.233 0.767 32 H -0.175 1.175 33 H -0.237 1.237 34 H 0.192 0.808 35 H 0.196 0.804 36 H 0.085 0.915 37 H 0.130 0.870 38 H 0.076 0.924 39 H 0.062 0.938 40 H 0.117 0.883 41 H 0.161 0.839 42 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.137 -5.083 -7.121 8.751 hybrid contribution 0.702 0.256 0.431 0.863 sum 0.840 -4.827 -6.691 8.293 Atomic orbital electron populations 1.23591 0.74598 1.05968 1.02430 1.86484 1.24945 1.32015 1.83153 1.23582 0.91474 0.81743 0.71527 1.90683 1.66966 1.37423 1.45918 1.20947 0.84804 0.90549 0.97044 1.45461 1.52838 1.30259 1.05744 1.18500 0.78489 0.85435 0.82250 1.90844 1.43306 1.38980 1.71217 1.19831 1.04919 0.96704 0.93957 1.20991 0.94639 0.95739 0.92546 1.20118 1.02843 0.95523 0.97228 1.25171 0.90174 1.14961 0.88935 1.86626 1.20595 1.56504 1.71408 0.94650 0.87023 0.73978 0.78980 1.18128 0.96860 0.84840 0.90976 1.91559 1.85652 1.56409 1.77198 1.21419 1.02549 1.01464 0.90863 1.21547 0.91826 0.90113 1.01888 1.23476 1.02667 0.92405 0.97035 1.23556 0.90625 0.91700 0.93737 0.88872 1.87911 1.33808 1.60077 1.48654 1.23017 1.02680 0.94029 0.87747 1.23842 1.04614 0.95925 0.91412 0.92886 0.91277 0.84709 0.73118 0.84497 0.85431 0.76702 1.17485 1.23661 0.80810 0.80432 0.91519 0.87033 0.92448 0.93804 0.88321 0.83947 0.87631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.35 -1.01 10.42 -51.36 -0.54 -1.54 16 3 C 0.48 2.81 6.45 71.24 0.46 3.27 16 4 O -0.52 -6.29 15.12 21.96 0.33 -5.96 16 5 C 0.16 0.05 1.11 3.38 0.00 0.06 16 6 N -0.69 2.44 5.07 -426.88 -2.17 0.28 16 7 C 0.56 1.54 7.42 86.75 0.64 2.18 16 8 O -0.56 -6.83 15.38 -3.92 -0.06 -6.89 16 9 C -0.15 0.20 5.87 -20.09 -0.12 0.09 16 10 C -0.02 -0.03 9.21 22.52 0.21 0.18 16 11 C -0.16 0.01 4.78 -19.86 -0.09 -0.09 16 12 C -0.08 -0.10 2.81 71.24 0.20 0.10 16 13 O -0.54 -2.58 12.88 -148.98 -1.92 -4.50 16 14 Si 0.75 0.15 30.81 68.60 2.11 2.26 16 15 C 0.11 -0.22 6.62 22.47 0.15 -0.08 16 16 F -0.13 -0.05 12.57 44.97 0.57 0.51 16 17 C -0.14 1.04 10.01 22.28 0.22 1.26 16 18 C -0.04 0.30 9.53 22.52 0.21 0.51 16 19 C -0.12 -0.46 6.15 31.12 0.19 -0.27 16 20 C 0.06 0.04 3.92 31.12 0.12 0.16 16 21 H 0.09 0.19 7.35 -2.39 -0.02 0.17 16 22 O -0.39 -0.81 10.72 -148.98 -1.60 -2.41 16 23 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 24 C -0.12 0.67 7.22 31.12 0.22 0.89 16 25 H 0.05 0.10 8.13 -2.38 -0.02 0.08 16 26 H 0.07 -0.11 8.13 -2.39 -0.02 -0.13 16 27 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 28 H 0.43 -5.14 6.75 -92.71 -0.63 -5.76 16 29 H 0.14 0.46 7.58 -2.91 -0.02 0.44 16 30 H 0.13 -0.02 7.76 -2.39 -0.02 -0.04 16 31 H 0.38 -0.20 8.41 -74.06 -0.62 -0.83 16 32 H -0.25 -0.80 5.27 99.48 0.52 -0.28 16 33 H -0.31 -2.52 7.11 99.48 0.71 -1.81 16 34 H 0.17 -2.14 8.06 -2.91 -0.02 -2.16 16 35 H 0.18 -2.95 6.41 -2.91 -0.02 -2.97 16 36 H 0.07 0.67 7.64 -2.38 -0.02 0.65 16 37 H 0.11 0.36 8.14 -2.39 -0.02 0.34 16 38 H 0.06 -0.29 8.14 -2.38 -0.02 -0.31 16 39 H 0.04 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.10 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.14 -1.44 8.14 -2.39 -0.02 -1.46 16 42 H 0.11 -0.87 8.10 -2.39 -0.02 -0.89 16 Total: 0.00 -25.44 361.02 1.28 -24.16 By element: Atomic # 1 Polarization: -16.22 SS G_CDS: -0.31 Total: -16.53 kcal Atomic # 6 Polarization: 5.76 SS G_CDS: 4.85 Total: 10.61 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -2.17 Total: 0.28 kcal Atomic # 8 Polarization: -17.52 SS G_CDS: -3.78 Total: -21.30 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.57 Total: 0.51 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: 2.11 Total: 2.26 kcal Total: -25.44 1.28 -24.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.580 kcal (2) G-P(sol) polarization free energy of solvation -25.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.275 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.161 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds