Wall clock time and date at job start Sun Mar 7 2021 00:14:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34232 * 116.99962 * 2 1 4 4 O 1.20821 * 119.99883 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99612 * 179.97438 * 3 2 1 6 6 N 1.46503 * 112.85478 * 324.06952 * 5 3 2 7 7 C 1.34778 * 119.99717 * 293.64893 * 6 5 3 8 8 O 1.21625 * 120.00045 * 354.95867 * 7 6 5 9 9 C 1.47286 * 119.99773 * 174.96747 * 7 6 5 10 10 C 1.40373 * 120.04496 * 179.71885 * 9 7 6 11 11 O 1.35668 * 120.13863 * 0.02562 * 10 9 7 12 12 C 1.38319 * 119.72441 * 179.78743 * 10 9 7 13 13 C 1.39567 * 119.81329 * 0.46549 * 12 10 9 14 14 C 1.47573 * 119.95732 * 179.74082 * 13 12 10 15 15 C 1.36106 * 125.94555 * 180.02562 * 14 13 12 16 16 C 1.40799 * 106.73223 * 179.97438 * 15 14 13 17 17 C 1.34837 * 107.04816 * 359.97438 * 16 15 14 18 18 C 1.50701 * 125.64714 * 180.02562 * 17 16 15 19 19 O 1.42897 * 109.47084 * 65.00646 * 18 17 16 20 20 Si 1.86305 * 109.46962 * 185.00124 * 18 17 16 21 21 O 1.34228 * 108.69700 * 359.75830 * 17 16 15 22 22 C 1.39966 * 120.08989 * 359.76265 * 13 12 10 23 23 C 1.36390 * 120.27476 * 0.02754 * 22 13 12 24 24 C 1.53784 * 113.61198 * 192.87193 * 5 3 2 25 25 C 1.53780 * 87.08164 * 270.80029 * 24 5 3 26 26 H 1.09001 * 113.61268 * 89.11942 * 25 24 5 27 27 O 1.42900 * 113.61478 * 219.93555 * 25 24 5 28 28 C 1.42900 * 114.00055 * 210.00364 * 27 25 24 29 29 C 1.53785 * 113.69065 * 95.33724 * 5 3 2 30 30 H 1.08999 * 109.47204 * 59.99722 * 1 2 3 31 31 H 1.08999 * 109.47493 * 180.02562 * 1 2 3 32 32 H 1.09007 * 109.47400 * 300.00020 * 1 2 3 33 33 H 0.96996 * 119.99750 * 113.63773 * 6 5 3 34 34 H 0.96708 * 114.00177 * 89.99668 * 11 10 9 35 35 H 1.08003 * 120.09371 * 180.25400 * 12 10 9 36 36 H 1.08003 * 126.63141 * 359.97438 * 15 14 13 37 37 H 1.07994 * 126.47207 * 179.97438 * 16 15 14 38 38 H 1.08997 * 109.47696 * 305.00241 * 18 17 16 39 39 H 0.96698 * 113.99816 * 179.97438 * 19 18 17 40 40 H 1.48490 * 110.00274 * 178.68273 * 20 18 17 41 41 H 1.48502 * 109.99814 * 300.00541 * 20 18 17 42 42 H 1.08002 * 119.86151 * 179.97438 * 22 13 12 43 43 H 1.08006 * 119.90243 * 179.97438 * 23 22 13 44 44 H 1.08999 * 113.61436 * 25.35330 * 24 5 3 45 45 H 1.09007 * 113.61118 * 156.17054 * 24 5 3 46 46 H 1.08997 * 109.47749 * 180.02562 * 28 27 25 47 47 H 1.09005 * 109.46812 * 300.00006 * 28 27 25 48 48 H 1.08996 * 109.47652 * 59.99646 * 28 27 25 49 49 H 1.08997 * 113.61350 * 203.66948 * 29 5 3 50 50 H 1.08992 * 113.61473 * 334.58110 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1913 0.2130 0.7932 7 6 4.0225 0.1819 2.1300 8 8 3.4290 1.0842 2.6892 9 6 4.5568 -0.9449 2.9137 10 6 4.3867 -0.9755 4.3067 11 8 3.7296 0.0316 4.9350 12 6 4.8873 -2.0391 5.0356 13 6 5.5663 -3.0691 4.3830 14 6 6.1068 -4.2025 5.1583 15 6 6.7859 -5.2668 4.6497 16 6 7.1109 -6.0982 5.7386 17 6 6.6203 -5.5076 6.8471 18 6 6.7335 -6.0434 8.2510 19 8 8.1072 -6.0627 8.6442 20 14 5.7705 -4.9504 9.4124 21 8 6.0197 -4.3604 6.4935 22 6 5.7357 -3.0284 2.9942 23 6 5.2398 -1.9835 2.2714 24 6 4.1094 2.6789 0.3144 25 6 4.0444 2.9560 -1.1968 26 1 3.0866 3.3590 -1.5260 27 8 5.1592 3.7014 -1.6905 28 6 4.8541 4.5257 -2.8172 29 6 4.1770 1.4376 -1.4014 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3634 0.5139 0.8900 33 1 4.7265 -0.4675 0.3559 34 1 2.7763 -0.1100 5.0144 35 1 4.7562 -2.0707 6.1072 36 1 7.0287 -5.4400 3.6117 37 1 7.6509 -7.0323 5.6943 38 1 6.3309 -7.0557 8.2872 39 1 8.2553 -6.3966 9.5396 40 1 5.8478 -5.4858 10.7953 41 1 6.3096 -3.5672 9.3723 42 1 6.2621 -3.8272 2.4930 43 1 5.3743 -1.9579 1.2001 44 1 3.4242 3.2912 0.9006 45 1 5.1229 2.6753 0.7158 46 1 5.7518 5.0578 -3.1320 47 1 4.4953 3.9028 -3.6366 48 1 4.0824 5.2450 -2.5429 49 1 5.2094 1.0949 -1.4703 50 1 3.5463 1.0480 -2.2003 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:48 Heat of formation + Delta-G solvation = -137.224076 kcal Electronic energy + Delta-G solvation = -38298.831316 eV Core-core repulsion = 33034.372881 eV Total energy + Delta-G solvation = -5264.458435 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.149 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -43.71443 -42.52769 -41.28855 -40.17935 -39.29879 -38.16124 -37.85861 -37.66925 -36.98121 -34.62962 -34.15154 -33.17645 -31.34706 -30.58665 -29.27507 -27.95055 -27.19102 -27.05950 -25.91552 -24.41332 -24.06143 -23.19285 -22.39251 -21.84720 -21.27823 -20.70269 -19.80436 -19.04814 -18.86625 -18.75278 -18.02259 -17.98939 -17.56497 -17.23844 -17.08583 -17.05825 -16.62410 -16.58111 -16.20858 -15.99141 -15.93980 -15.80986 -15.46606 -15.13504 -14.93386 -14.73304 -14.46694 -14.34404 -14.16777 -14.05312 -13.99206 -13.74063 -13.62036 -13.52501 -13.47867 -13.28041 -13.03364 -12.82973 -12.73452 -12.57076 -12.24204 -12.07062 -11.99222 -11.83770 -11.80649 -11.65915 -11.11563 -10.81488 -10.78742 -10.59461 -10.57538 -10.30995 -9.96603 -9.00395 -5.03411 -0.79335 0.11330 0.63989 0.99130 1.07787 1.34037 1.42343 1.53655 1.68173 1.82327 1.92452 1.98006 2.62027 2.78928 2.98884 3.04932 3.17909 3.22330 3.45039 3.50738 3.53822 3.54547 3.70260 3.76859 3.90676 3.95462 4.00911 4.11133 4.13275 4.20518 4.22485 4.34457 4.35932 4.37175 4.44222 4.52593 4.56444 4.57577 4.65832 4.67990 4.77476 4.78255 4.81176 4.84179 4.98214 5.00915 5.08390 5.16898 5.18011 5.32518 5.39474 5.46028 6.00121 6.14780 6.23375 6.29195 6.65637 6.68373 7.10901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.480 3.520 4 O -0.489 6.489 5 C 0.158 3.842 6 N -0.708 5.708 7 C 0.563 3.437 8 O -0.506 6.506 9 C -0.165 4.165 10 C 0.181 3.819 11 O -0.474 6.474 12 C -0.141 4.141 13 C 0.034 3.966 14 C 0.023 3.977 15 C -0.175 4.175 16 C -0.172 4.172 17 C 0.004 3.996 18 C -0.038 4.038 19 O -0.533 6.533 20 Si 0.694 3.306 21 O -0.161 6.161 22 C -0.116 4.116 23 C -0.062 4.062 24 C -0.110 4.110 25 C 0.064 3.936 26 H 0.101 0.899 27 O -0.370 6.370 28 C 0.027 3.973 29 C -0.142 4.142 30 H 0.065 0.935 31 H 0.104 0.896 32 H 0.065 0.935 33 H 0.407 0.593 34 H 0.399 0.601 35 H 0.144 0.856 36 H 0.157 0.843 37 H 0.155 0.845 38 H 0.099 0.901 39 H 0.388 0.612 40 H -0.251 1.251 41 H -0.250 1.250 42 H 0.140 0.860 43 H 0.137 0.863 44 H 0.096 0.904 45 H 0.110 0.890 46 H 0.089 0.911 47 H 0.043 0.957 48 H 0.046 0.954 49 H 0.118 0.882 50 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.430 -7.000 -3.448 7.933 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.320 3.680 4 O -0.374 6.374 5 C 0.069 3.931 6 N -0.364 5.364 7 C 0.351 3.649 8 O -0.380 6.380 9 C -0.168 4.168 10 C 0.134 3.866 11 O -0.285 6.285 12 C -0.160 4.160 13 C 0.033 3.967 14 C -0.027 4.027 15 C -0.194 4.194 16 C -0.191 4.191 17 C -0.046 4.046 18 C -0.147 4.147 19 O -0.342 6.342 20 Si 0.593 3.407 21 O -0.058 6.058 22 C -0.134 4.134 23 C -0.080 4.080 24 C -0.149 4.149 25 C 0.006 3.994 26 H 0.119 0.881 27 O -0.288 6.288 28 C -0.069 4.069 29 C -0.180 4.180 30 H 0.084 0.916 31 H 0.123 0.877 32 H 0.084 0.916 33 H 0.245 0.755 34 H 0.257 0.743 35 H 0.162 0.838 36 H 0.175 0.825 37 H 0.173 0.827 38 H 0.116 0.884 39 H 0.238 0.762 40 H -0.176 1.176 41 H -0.174 1.174 42 H 0.158 0.842 43 H 0.155 0.845 44 H 0.115 0.885 45 H 0.128 0.872 46 H 0.108 0.892 47 H 0.062 0.938 48 H 0.064 0.936 49 H 0.136 0.864 50 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.442 -4.826 -2.597 5.667 hybrid contribution 0.451 -1.255 -0.028 1.334 sum -0.991 -6.081 -2.625 6.697 Atomic orbital electron populations 1.23355 0.75703 1.04072 1.02853 1.86498 1.23790 1.32728 1.83616 1.23127 0.90583 0.81868 0.72444 1.90695 1.66054 1.36359 1.44326 1.20968 0.85814 0.90962 0.95368 1.45659 1.53737 1.30346 1.06625 1.18048 0.79630 0.85756 0.81463 1.90882 1.40542 1.36684 1.69932 1.20367 1.05775 0.97075 0.93628 1.18274 0.93634 0.86503 0.88178 1.84781 1.24927 1.40925 1.77888 1.21596 1.00364 0.92584 1.01425 1.17761 0.96129 0.90807 0.91992 1.20286 1.04486 0.97506 0.80405 1.21897 1.02171 0.94522 1.00816 1.21539 1.03855 1.02660 0.91059 1.21354 1.01131 0.86354 0.95807 1.23808 0.89394 1.06027 0.95451 1.86569 1.22406 1.88356 1.36847 0.94546 0.89039 0.79325 0.77805 1.83922 1.61891 1.36608 1.23384 1.20703 1.01387 0.99590 0.91721 1.20813 0.95035 0.92142 1.00046 1.23486 1.03425 0.91747 0.96213 1.23593 0.91002 0.90055 0.94792 0.88099 1.87948 1.33460 1.59603 1.47785 1.22872 1.02152 0.93924 0.87985 1.23860 1.03194 0.98112 0.92794 0.91632 0.87745 0.91619 0.75543 0.74257 0.83788 0.82505 0.82715 0.88378 0.76228 1.17557 1.17378 0.84237 0.84496 0.88514 0.87157 0.89231 0.93797 0.93575 0.86362 0.89426 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.70 10.42 -39.26 -0.41 -1.11 16 3 C 0.48 1.52 6.44 36.00 0.23 1.75 16 4 O -0.49 -2.71 15.12 -18.75 -0.28 -3.00 16 5 C 0.16 0.16 1.11 -132.16 -0.15 0.01 16 6 N -0.71 0.14 5.07 -49.03 -0.25 -0.11 16 7 C 0.56 1.41 7.40 -12.58 -0.09 1.31 16 8 O -0.51 -3.07 14.18 -16.70 -0.24 -3.31 16 9 C -0.16 -0.17 5.89 -104.79 -0.62 -0.79 16 10 C 0.18 0.35 6.71 -38.75 -0.26 0.09 16 11 O -0.47 -1.30 11.56 -40.66 -0.47 -1.77 16 12 C -0.14 -0.17 9.65 -39.06 -0.38 -0.54 16 13 C 0.03 0.02 5.87 -104.95 -0.62 -0.60 16 14 C 0.02 0.03 7.02 -36.54 -0.26 -0.22 16 15 C -0.18 -0.07 10.26 -39.38 -0.40 -0.47 16 16 C -0.17 -0.18 10.78 -39.82 -0.43 -0.61 16 17 C 0.00 0.01 6.24 -35.51 -0.22 -0.22 16 18 C -0.04 0.02 2.97 36.01 0.11 0.13 16 19 O -0.53 -0.25 12.86 -35.23 -0.45 -0.71 16 20 Si 0.69 -0.53 32.11 -169.99 -5.46 -5.99 16 21 O -0.16 -0.37 8.79 4.72 0.04 -0.33 16 22 C -0.12 0.17 9.49 -39.60 -0.38 -0.20 16 23 C -0.06 0.11 9.46 -39.62 -0.37 -0.27 16 24 C -0.11 -0.24 6.15 -25.92 -0.16 -0.40 16 25 C 0.06 0.06 3.92 -25.92 -0.10 -0.04 16 26 H 0.10 0.11 7.35 -51.93 -0.38 -0.28 16 27 O -0.37 -0.65 10.72 -35.23 -0.38 -1.03 16 28 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 29 C -0.14 0.18 7.22 -25.91 -0.19 -0.01 16 30 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 31 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 33 H 0.41 -1.41 6.73 -40.82 -0.27 -1.68 16 34 H 0.40 -0.39 9.06 45.56 0.41 0.02 16 35 H 0.14 0.10 7.90 -52.48 -0.41 -0.32 16 36 H 0.16 -0.36 7.24 -52.48 -0.38 -0.74 16 37 H 0.16 -0.07 8.06 -52.49 -0.42 -0.49 16 38 H 0.10 -0.31 7.96 -51.93 -0.41 -0.73 16 39 H 0.39 -1.55 8.74 45.56 0.40 -1.15 16 40 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 41 H -0.25 -0.83 7.11 56.52 0.40 -0.43 16 42 H 0.14 -0.54 6.95 -52.49 -0.37 -0.91 16 43 H 0.14 -0.69 6.39 -52.48 -0.34 -1.02 16 44 H 0.10 0.41 7.64 -51.93 -0.40 0.01 16 45 H 0.11 0.24 8.14 -51.93 -0.42 -0.18 16 46 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 47 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 48 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 49 H 0.12 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.09 -0.20 8.09 -51.93 -0.42 -0.62 16 LS Contribution 430.25 15.07 6.48 6.48 Total: 0.00 -12.71 430.25 -9.10 -21.81 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -5.57 Total: -12.01 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -2.12 Total: 1.06 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.25 Total: -0.11 kcal Atomic # 8 Polarization: -9.06 SS G_CDS: -2.19 Total: -11.25 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.46 Total: -5.99 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -12.71 -9.10 -21.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.410 kcal (2) G-P(sol) polarization free energy of solvation -12.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds