Wall clock time and date at job start Sun Mar 7 2021 00:14:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34234 * 116.99625 * 2 1 4 4 O 1.20822 * 120.00173 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99707 * 180.02562 * 3 2 1 6 6 N 1.46498 * 112.85211 * 325.03231 * 5 3 2 7 7 C 1.34777 * 120.00254 * 284.61904 * 6 5 3 8 8 O 1.21571 * 120.00298 * 5.10659 * 7 6 5 9 9 C 1.47673 * 119.99821 * 185.11669 * 7 6 5 10 10 C 1.40002 * 120.45677 * 3.84799 * 9 7 6 11 11 N 1.31303 * 121.37860 * 180.02562 * 10 9 7 12 12 C 1.32818 * 121.89254 * 359.97438 * 11 10 9 13 13 N 1.37156 * 132.97245 * 179.97438 * 12 11 10 14 14 C 1.36947 * 110.11720 * 180.02562 * 13 12 11 15 15 C 1.34177 * 109.94906 * 359.97438 * 14 13 12 16 16 C 1.50700 * 126.59636 * 179.97438 * 15 14 13 17 17 O 1.42893 * 109.47343 * 105.02673 * 16 15 14 18 18 Si 1.86303 * 109.47331 * 345.02243 * 16 15 14 19 19 C 1.41025 * 120.07738 * 359.72624 * 12 11 10 20 20 C 1.39278 * 119.62224 * 0.57107 * 19 12 11 21 21 C 1.50698 * 121.02975 * 179.71183 * 20 19 12 22 22 C 1.53788 * 113.61325 * 193.84219 * 5 3 2 23 23 C 1.53782 * 87.07894 * 270.79698 * 22 5 3 24 24 H 1.09004 * 113.60984 * 89.11505 * 23 22 5 25 25 O 1.42904 * 113.61463 * 220.01586 * 23 22 5 26 26 C 1.42890 * 113.99882 * 210.00155 * 25 23 22 27 27 C 1.53781 * 87.08385 * 334.56802 * 23 22 5 28 28 H 1.08997 * 109.47188 * 300.00264 * 1 2 3 29 29 H 1.09004 * 109.47129 * 60.00431 * 1 2 3 30 30 H 1.09006 * 109.46786 * 180.02562 * 1 2 3 31 31 H 0.97004 * 119.99658 * 104.60868 * 6 5 3 32 32 H 1.07999 * 119.31067 * 0.02562 * 10 9 7 33 33 H 0.97006 * 124.94013 * 0.05064 * 13 12 11 34 34 H 1.08001 * 125.02486 * 179.97438 * 14 13 12 35 35 H 1.09007 * 109.47045 * 225.02657 * 16 15 14 36 36 H 0.96701 * 114.00292 * 180.02562 * 17 16 15 37 37 H 1.48498 * 110.00131 * 298.68252 * 18 16 15 38 38 H 1.48503 * 109.99674 * 59.99776 * 18 16 15 39 39 H 1.09000 * 109.47053 * 263.17413 * 21 20 19 40 40 H 1.09003 * 109.46850 * 143.18223 * 21 20 19 41 41 H 1.08991 * 109.47319 * 23.18496 * 21 20 19 42 42 H 1.08994 * 113.61208 * 25.34571 * 22 5 3 43 43 H 1.09000 * 113.61523 * 156.16520 * 22 5 3 44 44 H 1.09009 * 109.46833 * 180.02562 * 26 25 23 45 45 H 1.09000 * 109.47377 * 299.99939 * 26 25 23 46 46 H 1.09001 * 109.47504 * 60.00074 * 26 25 23 47 47 H 1.09001 * 113.61545 * 270.88623 * 27 23 22 48 48 H 1.09001 * 113.61785 * 139.98097 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1926 0.1998 0.7727 7 6 4.1811 0.2436 2.1197 8 8 3.5718 1.1249 2.6941 9 6 4.9089 -0.7790 2.8978 10 6 5.6794 -1.7503 2.2476 11 7 6.3333 -2.6681 2.9214 12 6 6.2988 -2.7225 4.2481 13 7 6.8791 -3.5617 5.1647 14 6 6.5254 -3.1893 6.4343 15 6 5.7201 -2.1171 6.3892 16 6 5.1116 -1.4004 7.5670 17 8 5.8008 -0.1673 7.7823 18 14 5.2584 -2.4676 9.0870 19 6 5.5495 -1.7745 4.9751 20 6 4.8379 -0.7902 4.2935 21 6 4.0217 0.2346 5.0382 22 6 4.1100 2.6735 0.3366 23 6 4.0424 2.9767 -1.1695 24 1 3.0840 3.3852 -1.4901 25 8 5.1573 3.7290 -1.6525 26 6 4.8511 4.5729 -2.7642 27 6 4.1747 1.4621 -1.4005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 4.6156 -0.5437 0.3151 32 1 5.7371 -1.7447 1.1691 33 1 7.4563 -4.3099 4.9457 34 1 6.8472 -3.6854 7.3380 35 1 4.0596 -1.1981 7.3653 36 1 5.4618 0.3480 8.5270 37 1 4.5188 -3.7398 8.8877 38 1 6.6879 -2.7506 9.3726 39 1 2.9797 -0.0838 5.0697 40 1 4.0926 1.1956 4.5287 41 1 4.4024 0.3334 6.0547 42 1 3.4256 3.2755 0.9343 43 1 5.1240 2.6630 0.7362 44 1 5.7491 5.1091 -3.0714 45 1 4.4900 3.9646 -3.5935 46 1 4.0809 5.2883 -2.4761 47 1 5.2070 1.1206 -1.4771 48 1 3.5427 1.0862 -2.2051 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:52 Heat of formation + Delta-G solvation = -70.452548 kcal Electronic energy + Delta-G solvation = -35611.938710 eV Core-core repulsion = 30829.576789 eV Total energy + Delta-G solvation = -4782.361921 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.88875 -42.41526 -40.67972 -39.89427 -38.65649 -37.78618 -37.63510 -37.03589 -35.04232 -34.36867 -32.05955 -31.05959 -29.26650 -28.75902 -27.86651 -27.07652 -26.59749 -25.92525 -24.60484 -23.91736 -23.04061 -21.81777 -20.65216 -20.37092 -19.45074 -19.10169 -18.60909 -18.38507 -17.97407 -17.61559 -17.53070 -17.16933 -16.97442 -16.69170 -16.40969 -16.05795 -15.76989 -15.58707 -15.33491 -15.18609 -15.02147 -14.88578 -14.70503 -14.31427 -14.14818 -13.96833 -13.73264 -13.68352 -13.55405 -13.48295 -13.28769 -13.17814 -13.00497 -12.91594 -12.61439 -12.48572 -12.20130 -11.99957 -11.92547 -11.77721 -11.66164 -11.09141 -10.92780 -10.57251 -10.37406 -10.30381 -10.18587 -9.61201 -9.15914 -5.07818 -0.25893 -0.06410 1.02956 1.21633 1.31995 1.52836 1.57769 1.60980 1.85090 1.88607 1.91751 2.78466 2.84791 3.07636 3.23292 3.26379 3.34998 3.51699 3.53779 3.61291 3.68503 3.76335 3.83064 4.01810 4.05891 4.10358 4.16433 4.25795 4.28414 4.37639 4.38171 4.46208 4.47840 4.56441 4.59699 4.65764 4.68354 4.74245 4.79644 4.80597 4.92388 4.99987 5.03048 5.15727 5.22497 5.36117 5.39925 5.56878 5.76247 6.07727 6.16890 6.32552 6.64937 6.69247 6.84138 7.14535 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.479 3.521 4 O -0.491 6.491 5 C 0.157 3.843 6 N -0.707 5.707 7 C 0.578 3.422 8 O -0.518 6.518 9 C -0.233 4.233 10 C 0.184 3.816 11 N -0.502 5.502 12 C 0.310 3.690 13 N -0.569 5.569 14 C 0.064 3.936 15 C -0.131 4.131 16 C -0.041 4.041 17 O -0.543 6.543 18 Si 0.687 3.313 19 C -0.149 4.149 20 C 0.090 3.910 21 C -0.139 4.139 22 C -0.107 4.107 23 C 0.064 3.936 24 H 0.102 0.898 25 O -0.370 6.370 26 C 0.027 3.973 27 C -0.142 4.142 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.103 0.897 31 H 0.407 0.593 32 H 0.164 0.836 33 H 0.426 0.574 34 H 0.177 0.823 35 H 0.075 0.925 36 H 0.381 0.619 37 H -0.255 1.255 38 H -0.251 1.251 39 H 0.079 0.921 40 H 0.107 0.893 41 H 0.081 0.919 42 H 0.097 0.903 43 H 0.110 0.890 44 H 0.089 0.911 45 H 0.043 0.957 46 H 0.045 0.955 47 H 0.119 0.881 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.603 -2.585 0.913 2.807 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.319 3.681 4 O -0.377 6.377 5 C 0.069 3.931 6 N -0.362 5.362 7 C 0.367 3.633 8 O -0.394 6.394 9 C -0.241 4.241 10 C 0.015 3.985 11 N -0.215 5.215 12 C 0.077 3.923 13 N -0.174 5.174 14 C -0.062 4.062 15 C -0.139 4.139 16 C -0.152 4.152 17 O -0.350 6.350 18 Si 0.587 3.413 19 C -0.156 4.156 20 C 0.082 3.918 21 C -0.195 4.195 22 C -0.145 4.145 23 C 0.005 3.995 24 H 0.119 0.881 25 O -0.288 6.288 26 C -0.069 4.069 27 C -0.180 4.180 28 H 0.084 0.916 29 H 0.084 0.916 30 H 0.122 0.878 31 H 0.244 0.756 32 H 0.181 0.819 33 H 0.265 0.735 34 H 0.194 0.806 35 H 0.093 0.907 36 H 0.229 0.771 37 H -0.179 1.179 38 H -0.176 1.176 39 H 0.097 0.903 40 H 0.126 0.874 41 H 0.100 0.900 42 H 0.116 0.884 43 H 0.128 0.872 44 H 0.107 0.893 45 H 0.062 0.938 46 H 0.064 0.936 47 H 0.137 0.863 48 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.122 -3.412 0.868 3.523 hybrid contribution -0.446 -0.336 -0.713 0.906 sum -0.324 -3.749 0.155 3.766 Atomic orbital electron populations 1.23349 0.75757 1.04046 1.02808 1.86504 1.23755 1.32756 1.83556 1.23213 0.90687 0.81835 0.72350 1.90690 1.66114 1.36358 1.44492 1.20988 0.85684 0.90710 0.95762 1.45646 1.59209 1.25574 1.05812 1.17925 0.79665 0.84360 0.81359 1.90755 1.42724 1.36834 1.69133 1.20302 1.07949 1.01847 0.93961 1.22527 0.89396 0.87425 0.99190 1.66446 1.23906 1.25912 1.05275 1.18475 0.94476 0.90985 0.88325 1.41467 1.43637 1.28471 1.03866 1.21623 0.99100 0.98542 0.86970 1.19539 1.04241 0.98457 0.91654 1.24040 0.97162 0.91880 1.02109 1.86544 1.60378 1.32709 1.55334 0.94930 0.82299 0.80851 0.83177 1.19453 1.03754 0.98781 0.93585 1.19894 0.89402 0.91226 0.91290 1.21355 0.98364 0.98856 1.00885 1.23438 1.03365 0.91399 0.96345 1.23597 0.91010 0.90029 0.94814 0.88051 1.87948 1.33405 1.58383 1.49047 1.22868 1.02117 0.93601 0.88333 1.23872 1.03283 0.97975 0.92883 0.91621 0.91649 0.87813 0.75558 0.81889 0.73523 0.80577 0.90687 0.77108 1.17901 1.17562 0.90252 0.87434 0.89995 0.88435 0.87172 0.89260 0.93807 0.93588 0.86300 0.89471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.85 10.41 -39.27 -0.41 -1.26 16 3 C 0.48 1.58 6.77 36.01 0.24 1.82 16 4 O -0.49 -2.71 15.10 -18.75 -0.28 -2.99 16 5 C 0.16 0.17 1.12 -132.16 -0.15 0.02 16 6 N -0.71 -0.08 5.02 -48.91 -0.25 -0.32 16 7 C 0.58 1.56 7.41 -12.41 -0.09 1.47 16 8 O -0.52 -2.78 12.40 5.30 0.07 -2.71 16 9 C -0.23 -0.60 5.89 -104.82 -0.62 -1.22 16 10 C 0.18 0.25 10.67 -17.12 -0.18 0.06 16 11 N -0.50 -1.63 10.37 -11.96 -0.12 -1.75 16 12 C 0.31 1.08 8.42 -155.71 -1.31 -0.23 16 13 N -0.57 -0.57 6.04 -12.12 -0.07 -0.64 16 14 C 0.06 0.06 10.44 -16.70 -0.17 -0.12 16 15 C -0.13 -0.30 5.61 -102.73 -0.58 -0.88 16 16 C -0.04 0.01 1.87 36.01 0.07 0.08 16 17 O -0.54 0.02 11.65 -35.23 -0.41 -0.39 16 18 Si 0.69 -1.45 30.80 -169.99 -5.24 -6.68 16 19 C -0.15 -0.57 6.16 -105.13 -0.65 -1.21 16 20 C 0.09 0.33 5.98 -103.67 -0.62 -0.29 16 21 C -0.14 -0.39 8.62 36.00 0.31 -0.08 16 22 C -0.11 -0.21 5.81 -25.91 -0.15 -0.36 16 23 C 0.06 0.06 3.92 -25.92 -0.10 -0.04 16 24 H 0.10 0.11 7.32 -51.93 -0.38 -0.27 16 25 O -0.37 -0.66 10.71 -35.23 -0.38 -1.04 16 26 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 27 C -0.14 0.15 7.25 -25.92 -0.19 -0.04 16 28 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.41 -1.15 6.85 -40.82 -0.28 -1.43 16 32 H 0.16 -0.41 6.44 -52.49 -0.34 -0.75 16 33 H 0.43 -0.76 8.96 -40.82 -0.37 -1.12 16 34 H 0.18 -0.27 6.31 -52.49 -0.33 -0.60 16 35 H 0.08 -0.10 7.12 -51.92 -0.37 -0.47 16 36 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 37 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 38 H -0.25 -0.07 7.04 56.52 0.40 0.33 16 39 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 40 H 0.11 0.45 5.68 -51.93 -0.30 0.16 16 41 H 0.08 0.16 4.77 -51.93 -0.25 -0.09 16 42 H 0.10 0.37 7.66 -51.93 -0.40 -0.03 16 43 H 0.11 0.21 8.14 -51.93 -0.42 -0.21 16 44 H 0.09 -0.13 8.14 -51.92 -0.42 -0.55 16 45 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 47 H 0.12 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.09 -0.18 8.10 -51.93 -0.42 -0.60 16 LS Contribution 395.19 15.07 5.96 5.96 Total: 0.00 -11.69 395.19 -9.19 -20.88 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -6.03 Total: -10.19 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -2.02 Total: 1.14 kcal Atomic # 7 Polarization: -2.28 SS G_CDS: -0.44 Total: -2.72 kcal Atomic # 8 Polarization: -6.97 SS G_CDS: -1.41 Total: -8.39 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.24 Total: -6.68 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -11.69 -9.19 -20.88 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.573 kcal (2) G-P(sol) polarization free energy of solvation -11.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.879 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds