Wall clock time and date at job start Sun Mar 7 2021 00:14:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34232 * 117.00088 * 2 1 4 4 O 1.20826 * 119.99732 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00096 * 180.02562 * 3 2 1 6 6 N 1.46506 * 112.84747 * 334.65995 * 5 3 2 7 7 C 1.34776 * 119.99989 * 50.34139 * 6 5 3 8 8 O 1.21645 * 119.99756 * 359.97438 * 7 6 5 9 9 C 1.47056 * 120.00143 * 179.97438 * 7 6 5 10 10 C 1.35858 * 125.42815 * 180.02562 * 9 7 6 11 11 C 1.41598 * 107.73004 * 179.97438 * 10 9 7 12 12 C 1.40067 * 133.38344 * 180.02562 * 11 10 9 13 13 C 1.36472 * 119.82822 * 179.97438 * 12 11 10 14 14 C 1.38896 * 120.61584 * 0.02562 * 13 12 11 15 15 C 1.50707 * 119.67364 * 180.02562 * 14 13 12 16 16 O 1.42905 * 109.46923 * 119.99868 * 15 14 13 17 17 Si 1.86297 * 109.47008 * 0.02562 * 15 14 13 18 18 C 1.37708 * 120.64780 * 0.02562 * 14 13 12 19 19 C 1.39184 * 119.81320 * 359.95947 * 18 14 13 20 20 N 1.37484 * 133.18942 * 180.33859 * 19 18 14 21 21 C 1.53781 * 113.61347 * 203.46775 * 5 3 2 22 22 C 1.53782 * 87.08260 * 270.79732 * 21 5 3 23 23 H 1.09000 * 113.61104 * 89.19387 * 22 21 5 24 24 O 1.42891 * 113.61386 * 220.01806 * 22 21 5 25 25 C 1.42897 * 114.00022 * 209.99361 * 24 22 21 26 26 C 1.53773 * 113.61644 * 105.85965 * 5 3 2 27 27 H 1.08995 * 109.46925 * 60.00531 * 1 2 3 28 28 H 1.08998 * 109.46864 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.46702 * 300.00189 * 1 2 3 30 30 H 0.97000 * 119.99526 * 230.33278 * 6 5 3 31 31 H 1.08005 * 126.13643 * 359.96318 * 10 9 7 32 32 H 1.08000 * 120.08220 * 0.02562 * 12 11 10 33 33 H 1.08002 * 119.68986 * 180.02562 * 13 12 11 34 34 H 1.08997 * 109.46875 * 239.99587 * 15 14 13 35 35 H 0.96701 * 114.00285 * 300.00235 * 16 15 14 36 36 H 1.48499 * 110.00107 * 58.68102 * 17 15 14 37 37 H 1.48503 * 109.99608 * 179.97438 * 17 15 14 38 38 H 1.08006 * 120.09150 * 179.97438 * 18 14 13 39 39 H 0.97000 * 125.60240 * 359.96962 * 20 19 18 40 40 H 1.09005 * 113.61233 * 25.34462 * 21 5 3 41 41 H 1.09005 * 113.61544 * 156.16128 * 21 5 3 42 42 H 1.09004 * 109.46674 * 60.00823 * 25 24 22 43 43 H 1.08998 * 109.47602 * 179.97438 * 25 24 22 44 44 H 1.08995 * 109.47691 * 300.00672 * 25 24 22 45 45 H 1.09000 * 113.61464 * 203.74598 * 26 5 3 46 46 H 1.09003 * 113.61910 * 334.64878 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 7 4.1985 0.0860 0.5768 7 6 3.8373 -1.1417 0.1541 8 8 2.9860 -1.2627 -0.7064 9 6 4.4722 -2.3351 0.7332 10 6 4.1940 -3.6199 0.3904 11 6 5.0173 -4.4635 1.1751 12 6 5.1689 -5.8535 1.2579 13 6 6.0687 -6.3872 2.1342 14 6 6.8375 -5.5645 2.9474 15 6 7.8252 -6.1765 3.9071 16 8 9.1408 -5.7129 3.5968 17 14 7.7697 -8.0325 3.7557 18 6 6.7060 -4.1951 2.8853 19 6 5.7953 -3.6268 1.9994 20 7 5.4493 -2.3281 1.7097 21 6 4.1141 2.5977 0.5606 22 6 4.0337 3.1482 -0.8731 23 1 3.0733 3.6051 -1.1121 24 8 5.1448 3.9712 -1.2333 25 6 4.8298 4.9887 -2.1859 26 6 4.1609 1.6919 -1.3560 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 4.8771 0.1825 1.2631 31 1 3.4740 -3.9405 -0.3480 32 1 4.5758 -6.5011 0.6292 33 1 6.1841 -7.4592 2.1959 34 1 7.5688 -5.8868 4.9262 35 1 9.4358 -5.9355 2.7031 36 1 8.0866 -8.4382 2.3628 37 1 8.7397 -8.6480 4.6967 38 1 7.3081 -3.5638 3.5221 39 1 5.8285 -1.5370 2.1237 40 1 3.4354 3.0911 1.2565 41 1 5.1316 2.5214 0.9441 42 1 4.0628 5.6456 -1.7755 43 1 5.7251 5.5699 -2.4064 44 1 4.4609 4.5274 -3.1019 45 1 5.1917 1.3678 -1.4990 46 1 3.5201 1.4551 -2.2054 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:14:59 Heat of formation + Delta-G solvation = -82.528581 kcal Electronic energy + Delta-G solvation = -32513.476055 eV Core-core repulsion = 27951.554008 eV Total energy + Delta-G solvation = -4561.922047 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.145 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.85677 -42.39536 -40.46419 -39.93247 -38.95611 -37.83181 -37.12321 -36.94512 -34.47229 -33.23653 -31.15004 -30.37316 -29.31247 -27.97300 -27.31354 -27.01084 -25.87956 -24.42253 -23.47066 -22.77918 -21.97107 -21.16186 -20.85034 -19.73157 -19.14927 -18.50494 -18.10994 -17.73068 -17.69168 -17.32199 -17.07913 -16.71314 -16.41737 -16.17051 -16.00290 -15.87595 -15.51274 -15.24081 -15.18004 -14.96635 -14.75163 -14.62971 -14.51916 -14.40334 -13.99763 -13.77708 -13.65105 -13.34973 -13.15109 -13.08341 -12.59942 -12.54288 -12.48985 -12.31931 -12.21069 -12.08876 -11.86974 -11.72179 -11.54524 -11.20805 -10.94008 -10.66526 -10.57882 -10.45801 -9.30894 -8.79934 -4.85266 -0.33894 0.55645 0.78268 0.99605 1.36127 1.51620 1.63493 1.67110 1.87596 2.03153 2.21352 2.75762 2.79480 2.88481 3.13991 3.41033 3.44608 3.52477 3.62261 3.69875 3.76432 3.94921 4.07603 4.17817 4.24268 4.28124 4.32557 4.37558 4.42321 4.48541 4.48996 4.49354 4.56534 4.60683 4.63546 4.65989 4.69863 4.72798 4.84085 4.92257 5.01336 5.02592 5.24350 5.35105 5.43456 5.55865 5.61185 6.00131 6.09758 6.19435 6.43019 6.50388 6.52273 6.94393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.323 6.323 3 C 0.471 3.529 4 O -0.524 6.524 5 C 0.156 3.844 6 N -0.700 5.700 7 C 0.582 3.418 8 O -0.507 6.507 9 C 0.017 3.983 10 C -0.115 4.115 11 C -0.134 4.134 12 C -0.058 4.058 13 C -0.148 4.148 14 C -0.087 4.087 15 C -0.079 4.079 16 O -0.548 6.548 17 Si 0.767 3.233 18 C -0.110 4.110 19 C 0.107 3.893 20 N -0.566 5.566 21 C -0.106 4.106 22 C 0.065 3.935 23 H 0.095 0.905 24 O -0.384 6.384 25 C 0.022 3.978 26 C -0.140 4.140 27 H 0.060 0.940 28 H 0.119 0.881 29 H 0.063 0.937 30 H 0.420 0.580 31 H 0.157 0.843 32 H 0.147 0.853 33 H 0.146 0.854 34 H 0.128 0.872 35 H 0.386 0.614 36 H -0.283 1.283 37 H -0.307 1.307 38 H 0.135 0.865 39 H 0.431 0.569 40 H 0.096 0.904 41 H 0.138 0.862 42 H 0.050 0.950 43 H 0.100 0.900 44 H 0.047 0.953 45 H 0.122 0.878 46 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.698 -0.425 1.979 2.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.237 6.237 3 C 0.313 3.687 4 O -0.413 6.413 5 C 0.067 3.933 6 N -0.356 5.356 7 C 0.369 3.631 8 O -0.381 6.381 9 C -0.093 4.093 10 C -0.142 4.142 11 C -0.138 4.138 12 C -0.077 4.077 13 C -0.167 4.167 14 C -0.089 4.089 15 C -0.188 4.188 16 O -0.356 6.356 17 Si 0.673 3.327 18 C -0.130 4.130 19 C -0.003 4.003 20 N -0.172 5.172 21 C -0.144 4.144 22 C 0.007 3.993 23 H 0.113 0.887 24 O -0.303 6.303 25 C -0.074 4.074 26 C -0.179 4.179 27 H 0.078 0.922 28 H 0.137 0.863 29 H 0.082 0.918 30 H 0.258 0.742 31 H 0.174 0.826 32 H 0.165 0.835 33 H 0.163 0.837 34 H 0.145 0.855 35 H 0.235 0.765 36 H -0.210 1.210 37 H -0.235 1.235 38 H 0.153 0.847 39 H 0.272 0.728 40 H 0.114 0.886 41 H 0.156 0.844 42 H 0.068 0.932 43 H 0.119 0.881 44 H 0.065 0.935 45 H 0.140 0.860 46 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 0.426 -0.560 1.864 1.992 hybrid contribution 0.626 1.148 -0.496 1.398 sum 1.052 0.587 1.367 1.822 Atomic orbital electron populations 1.23503 0.76213 1.05078 1.02244 1.86997 1.23674 1.30997 1.82042 1.23512 0.91276 0.82042 0.71828 1.90677 1.66788 1.37127 1.46756 1.20999 0.85337 0.87397 0.99534 1.45541 1.43203 1.03450 1.43385 1.17287 0.81564 0.82052 0.82166 1.90909 1.30622 1.85588 1.30932 1.19886 0.97346 0.94681 0.97415 1.21072 1.01369 0.90161 1.01577 1.18439 1.00606 0.94390 1.00402 1.20623 0.97188 0.92330 0.97553 1.20678 0.98227 1.00002 0.97746 1.20069 0.97936 0.93081 0.97854 1.25207 0.81565 1.11040 1.01017 1.86568 1.30932 1.79969 1.38166 0.93954 0.88493 0.72567 0.77665 1.19986 0.98681 0.94758 0.99600 1.18424 0.98913 0.83944 0.99026 1.41809 1.34095 1.06984 1.34292 1.23530 1.04375 0.89152 0.97323 1.23547 0.90771 0.89723 0.95293 0.88686 1.87882 1.33786 1.46436 1.62149 1.23005 1.02814 0.90205 0.91416 1.23961 1.03282 0.96040 0.94640 0.92164 0.86314 0.91810 0.74172 0.82557 0.83528 0.83724 0.85467 0.76452 1.20979 1.23530 0.84748 0.72830 0.88589 0.84380 0.93174 0.88121 0.93476 0.86021 0.90940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 10.56 113.37 1.20 1.27 16 2 O -0.32 -2.54 6.30 -43.45 -0.27 -2.81 16 3 C 0.47 3.20 6.98 71.24 0.50 3.70 16 4 O -0.52 -5.38 14.99 21.96 0.33 -5.05 16 5 C 0.16 0.07 1.22 3.38 0.00 0.08 16 6 N -0.70 1.94 5.31 -427.50 -2.27 -0.34 16 7 C 0.58 1.66 7.15 86.56 0.62 2.28 16 8 O -0.51 -4.83 13.36 19.95 0.27 -4.56 16 9 C 0.02 0.02 6.96 39.91 0.28 0.30 16 10 C -0.11 -0.36 10.53 22.55 0.24 -0.12 16 11 C -0.13 -0.30 6.16 -21.36 -0.13 -0.43 16 12 C -0.06 0.04 10.06 22.30 0.22 0.26 16 13 C -0.15 0.33 8.59 22.01 0.19 0.51 16 14 C -0.09 0.13 5.40 -19.83 -0.11 0.02 16 15 C -0.08 0.19 2.81 71.24 0.20 0.39 16 16 O -0.55 -0.39 12.76 -148.98 -1.90 -2.29 16 17 Si 0.77 -2.37 29.75 68.60 2.04 -0.33 16 18 C -0.11 0.08 9.61 22.37 0.22 0.30 16 19 C 0.11 0.05 7.25 39.13 0.28 0.34 16 20 N -0.57 1.70 6.07 -177.20 -1.08 0.63 16 21 C -0.11 0.32 6.96 31.12 0.22 0.54 16 22 C 0.07 0.04 3.90 31.18 0.12 0.16 16 23 H 0.10 0.24 7.06 -2.39 -0.02 0.23 16 24 O -0.38 -0.69 10.72 -148.98 -1.60 -2.29 16 25 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 26 C -0.14 -0.09 7.29 31.18 0.23 0.13 16 27 H 0.06 0.22 8.13 -2.39 -0.02 0.20 16 28 H 0.12 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.06 0.14 8.13 -2.39 -0.02 0.13 16 30 H 0.42 -4.08 7.69 -92.71 -0.71 -4.79 16 31 H 0.16 0.39 8.06 -2.91 -0.02 0.37 16 32 H 0.15 -0.67 8.06 -2.91 -0.02 -0.70 16 33 H 0.15 -0.89 4.82 -2.91 -0.01 -0.90 16 34 H 0.13 -0.53 7.96 -2.39 -0.02 -0.55 16 35 H 0.39 -1.71 8.70 -74.06 -0.64 -2.36 16 36 H -0.28 -0.25 7.11 99.48 0.71 0.46 16 37 H -0.31 -1.55 7.11 99.48 0.71 -0.84 16 38 H 0.13 -0.37 8.06 -2.91 -0.02 -0.39 16 39 H 0.43 -4.16 8.12 -92.71 -0.75 -4.91 16 40 H 0.10 -0.22 7.85 -2.38 -0.02 -0.24 16 41 H 0.14 -1.11 8.13 -2.38 -0.02 -1.13 16 42 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 43 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 44 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 45 H 0.12 -0.14 8.14 -2.39 -0.02 -0.16 16 46 H 0.07 0.24 8.09 -2.39 -0.02 0.22 16 Total: 0.00 -22.29 385.32 0.01 -22.29 By element: Atomic # 1 Polarization: -15.17 SS G_CDS: -1.01 Total: -16.18 kcal Atomic # 6 Polarization: 5.42 SS G_CDS: 5.50 Total: 10.92 kcal Atomic # 7 Polarization: 3.64 SS G_CDS: -3.35 Total: 0.29 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -3.17 Total: -17.00 kcal Atomic # 14 Polarization: -2.37 SS G_CDS: 2.04 Total: -0.33 kcal Total: -22.29 0.01 -22.29 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.244 kcal (2) G-P(sol) polarization free energy of solvation -22.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.285 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds