Wall clock time and date at job start Sun Mar 7 2021 00:15:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34235 * 116.99692 * 2 1 4 4 O 1.20831 * 119.99815 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99868 * 180.02562 * 3 2 1 6 6 N 1.46502 * 112.85145 * 35.50194 * 5 3 2 7 7 C 1.34770 * 119.99913 * 65.87297 * 6 5 3 8 8 O 1.21584 * 120.00108 * 4.99687 * 7 6 5 9 9 C 1.47656 * 119.99899 * 185.00328 * 7 6 5 10 10 C 1.40163 * 119.97229 * 359.72294 * 9 7 6 11 11 C 1.36354 * 120.66552 * 179.79750 * 10 9 7 12 12 C 1.39325 * 120.23704 * 0.44247 * 11 10 9 13 13 N 1.37401 * 133.25077 * 179.79355 * 12 11 10 14 14 C 1.36868 * 109.98310 * 180.02562 * 13 12 11 15 15 C 1.34187 * 109.96320 * 359.97438 * 14 13 12 16 16 C 1.50704 * 126.53747 * 180.02562 * 15 14 13 17 17 O 1.42893 * 109.47175 * 105.00302 * 16 15 14 18 18 Si 1.86295 * 109.47247 * 344.99928 * 16 15 14 19 19 C 1.40906 * 119.64536 * 359.81523 * 12 11 10 20 20 C 1.39187 * 119.97016 * 180.02562 * 9 7 6 21 21 C 1.53782 * 113.69265 * 264.23269 * 5 3 2 22 22 C 1.53781 * 87.08456 * 220.00845 * 21 5 3 23 23 H 1.09002 * 113.69015 * 139.98876 * 22 21 5 24 24 O 1.42893 * 113.61185 * 270.88448 * 22 21 5 25 25 C 1.42900 * 114.00041 * 247.49221 * 24 22 21 26 26 C 1.53780 * 113.61454 * 166.69982 * 5 3 2 27 27 H 1.09007 * 109.46873 * 299.99236 * 1 2 3 28 28 H 1.08992 * 109.47799 * 59.99650 * 1 2 3 29 29 H 1.09006 * 109.47124 * 179.97438 * 1 2 3 30 30 H 0.96998 * 119.99518 * 245.87862 * 6 5 3 31 31 H 1.07998 * 119.67027 * 359.97438 * 10 9 7 32 32 H 1.08005 * 119.88272 * 180.25593 * 11 10 9 33 33 H 0.97004 * 125.01390 * 0.02562 * 13 12 11 34 34 H 1.08000 * 125.01748 * 179.97438 * 14 13 12 35 35 H 1.09001 * 109.46757 * 225.00206 * 16 15 14 36 36 H 0.96703 * 114.00119 * 179.97438 * 17 16 15 37 37 H 1.48505 * 110.00022 * 298.68685 * 18 16 15 38 38 H 1.48499 * 109.99993 * 59.99884 * 18 16 15 39 39 H 1.08000 * 120.30717 * 359.97438 * 20 9 7 40 40 H 1.09006 * 113.61364 * 334.55727 * 21 5 3 41 41 H 1.08999 * 113.61447 * 105.46046 * 21 5 3 42 42 H 1.08997 * 109.47305 * 180.02562 * 25 24 22 43 43 H 1.09002 * 109.47105 * 300.00581 * 25 24 22 44 44 H 1.08996 * 109.47152 * 59.99981 * 25 24 22 45 45 H 1.09002 * 113.61199 * 254.61220 * 26 5 3 46 46 H 1.09000 * 113.61747 * 25.43025 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4031 2.2094 0.0005 5 6 3.5662 1.2750 -0.0006 6 7 4.1916 0.2074 -0.7851 7 6 4.0153 0.1606 -2.1204 8 8 3.4141 1.0534 -2.6858 9 6 4.5523 -0.9748 -2.8966 10 6 5.2503 -2.0009 -2.2449 11 6 5.7486 -3.0580 -2.9473 12 6 5.5769 -3.1264 -4.3282 13 7 5.9592 -4.0403 -5.2803 14 6 5.5356 -3.6330 -6.5164 15 6 4.8780 -2.4678 -6.4143 16 6 4.2546 -1.6875 -7.5429 17 8 2.8348 -1.8431 -7.5024 18 14 4.9028 -2.3231 -9.1697 19 6 4.8817 -2.0986 -4.9959 20 6 4.3704 -1.0223 -4.2757 21 6 4.1765 1.4484 1.4003 22 6 5.1720 2.4297 0.7593 23 1 5.3807 3.3055 1.3737 24 8 6.3574 1.8021 0.2665 25 6 7.5420 2.1521 0.9850 26 6 4.1095 2.6767 -0.3247 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8898 29 1 -0.3634 -1.0277 -0.0005 30 1 4.7325 -0.4658 -0.3433 31 1 5.3924 -1.9551 -1.1753 32 1 6.2809 -3.8437 -2.4316 33 1 6.4561 -4.8543 -5.1027 34 1 5.7055 -4.1701 -7.4378 35 1 4.5076 -0.6324 -7.4383 36 1 2.3667 -1.3665 -8.2015 37 1 6.3747 -2.1378 -9.2373 38 1 4.5645 -3.7607 -9.3244 39 1 3.8371 -0.2316 -4.7826 40 1 3.5008 1.9170 2.1159 41 1 4.6439 0.5433 1.7880 42 1 8.3971 1.6354 0.5494 43 1 7.6990 3.2290 0.9242 44 1 7.4334 1.8593 2.0292 45 1 4.5228 2.7631 -1.3295 46 1 3.4150 3.4810 -0.0820 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:13 Heat of formation + Delta-G solvation = -88.669539 kcal Electronic energy + Delta-G solvation = -33194.704668 eV Core-core repulsion = 28632.516329 eV Total energy + Delta-G solvation = -4562.188339 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.145 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.67655 -42.39810 -40.80215 -39.92265 -37.93535 -37.75304 -37.49427 -37.00360 -34.31132 -33.45557 -30.99399 -30.62137 -29.34575 -27.74614 -27.09000 -26.56740 -26.46023 -24.83241 -23.57704 -22.75868 -21.82369 -20.68018 -20.55229 -19.26162 -19.16090 -18.65338 -18.34534 -18.25589 -17.57221 -17.37039 -17.22317 -16.93428 -16.18787 -16.07485 -15.97405 -15.69761 -15.47338 -15.35645 -15.09688 -14.95253 -14.84247 -14.77275 -14.41536 -14.22416 -13.86616 -13.73533 -13.58242 -13.43229 -13.39974 -13.02717 -12.77524 -12.65492 -12.54965 -12.17453 -12.08079 -12.05195 -11.93074 -11.92746 -11.63226 -11.11251 -10.90115 -10.61708 -10.32163 -10.21011 -9.44707 -8.93077 -4.92810 -0.24572 0.10553 0.87201 1.32843 1.34375 1.51498 1.71445 1.79380 1.86821 1.94016 1.97564 2.60933 2.79777 3.16406 3.22738 3.45700 3.49735 3.54572 3.62912 3.66056 3.77473 3.99060 4.07641 4.15674 4.17826 4.19852 4.21306 4.32706 4.44549 4.45186 4.49305 4.52751 4.56180 4.58621 4.61460 4.69862 4.72391 4.77019 4.86179 4.92915 4.94408 5.18425 5.20646 5.20900 5.25995 5.38106 5.46119 5.87099 6.23130 6.36161 6.43207 6.52750 6.93237 7.06236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.358 6.358 3 C 0.466 3.534 4 O -0.528 6.528 5 C 0.154 3.846 6 N -0.674 5.674 7 C 0.569 3.431 8 O -0.578 6.578 9 C -0.173 4.173 10 C -0.059 4.059 11 C -0.124 4.124 12 C 0.112 3.888 13 N -0.572 5.572 14 C 0.059 3.941 15 C -0.181 4.181 16 C -0.061 4.061 17 O -0.570 6.570 18 Si 0.791 3.209 19 C -0.130 4.130 20 C -0.014 4.014 21 C -0.126 4.126 22 C 0.077 3.923 23 H 0.112 0.888 24 O -0.380 6.380 25 C 0.024 3.976 26 C -0.132 4.132 27 H 0.071 0.929 28 H 0.049 0.951 29 H 0.130 0.870 30 H 0.423 0.577 31 H 0.164 0.836 32 H 0.165 0.835 33 H 0.438 0.562 34 H 0.189 0.811 35 H 0.068 0.932 36 H 0.398 0.602 37 H -0.286 1.286 38 H -0.279 1.279 39 H 0.113 0.887 40 H 0.126 0.874 41 H 0.120 0.880 42 H 0.093 0.907 43 H 0.046 0.954 44 H 0.061 0.939 45 H 0.069 0.931 46 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.722 -4.855 2.611 7.945 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.273 6.273 3 C 0.308 3.692 4 O -0.416 6.416 5 C 0.064 3.936 6 N -0.328 5.328 7 C 0.359 3.641 8 O -0.458 6.458 9 C -0.178 4.178 10 C -0.078 4.078 11 C -0.144 4.144 12 C 0.003 3.997 13 N -0.176 5.176 14 C -0.068 4.068 15 C -0.188 4.188 16 C -0.170 4.170 17 O -0.379 6.379 18 Si 0.693 3.307 19 C -0.134 4.134 20 C -0.034 4.034 21 C -0.164 4.164 22 C 0.019 3.981 23 H 0.130 0.870 24 O -0.299 6.299 25 C -0.072 4.072 26 C -0.170 4.170 27 H 0.090 0.910 28 H 0.068 0.932 29 H 0.148 0.852 30 H 0.263 0.737 31 H 0.181 0.819 32 H 0.183 0.817 33 H 0.279 0.721 34 H 0.205 0.795 35 H 0.086 0.914 36 H 0.249 0.751 37 H -0.212 1.212 38 H -0.205 1.205 39 H 0.131 0.869 40 H 0.144 0.856 41 H 0.138 0.862 42 H 0.111 0.889 43 H 0.065 0.935 44 H 0.079 0.921 45 H 0.087 0.913 46 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 5.802 -5.148 2.198 8.062 hybrid contribution -0.163 -0.035 0.584 0.608 sum 5.640 -5.183 2.783 8.149 Atomic orbital electron populations 1.23529 0.75159 1.05617 1.02314 1.86521 1.24689 1.32876 1.83234 1.24343 0.92382 0.81427 0.71033 1.90645 1.67136 1.37367 1.46472 1.21290 0.83206 0.91339 0.97752 1.45111 1.52335 1.29586 1.05808 1.18447 0.78202 0.85293 0.82124 1.90785 1.43911 1.40175 1.70946 1.19484 1.07268 0.97605 0.93394 1.20907 0.94562 0.91407 1.00949 1.20064 1.04248 1.01038 0.89057 1.18706 0.98634 0.90497 0.91898 1.41676 1.49244 1.22155 1.04525 1.21875 0.99741 0.95729 0.89501 1.20100 1.07530 0.98421 0.92713 1.24455 0.85074 1.01638 1.05806 1.86476 1.17285 1.75922 1.58240 0.93737 0.78127 0.79925 0.78905 1.19146 1.04096 0.96659 0.93504 1.20565 0.94495 0.95698 0.92644 1.23840 0.97959 1.03152 0.91452 1.22948 0.84931 0.95947 0.94320 0.87027 1.87910 1.15465 1.69167 1.57331 1.23016 0.86506 1.00563 0.97095 1.23594 0.97778 0.94347 1.01309 0.91019 0.93247 0.85214 0.73691 0.81901 0.81733 0.72073 0.79462 0.91385 0.75142 1.21235 1.20549 0.86877 0.85621 0.86180 0.88854 0.93510 0.92082 0.91251 0.86937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.12 10.56 113.37 1.20 1.32 16 2 O -0.36 -3.26 10.41 -51.47 -0.54 -3.79 16 3 C 0.47 5.19 6.58 71.23 0.47 5.66 16 4 O -0.53 -8.70 15.66 21.95 0.34 -8.36 16 5 C 0.15 0.80 1.00 3.38 0.00 0.81 16 6 N -0.67 -2.89 4.48 -426.94 -1.91 -4.80 16 7 C 0.57 6.60 7.31 86.73 0.63 7.23 16 8 O -0.58 -11.75 14.87 -3.98 -0.06 -11.81 16 9 C -0.17 -1.52 5.87 -20.09 -0.12 -1.64 16 10 C -0.06 -0.05 9.46 22.30 0.21 0.16 16 11 C -0.12 0.05 10.00 22.09 0.22 0.27 16 12 C 0.11 0.50 7.27 39.19 0.28 0.78 16 13 N -0.57 -0.03 6.05 -187.48 -1.13 -1.17 16 14 C 0.06 0.18 10.43 82.98 0.87 1.05 16 15 C -0.18 -1.45 5.61 -18.61 -0.10 -1.55 16 16 C -0.06 -0.25 3.05 71.24 0.22 -0.03 16 17 O -0.57 -3.09 12.86 -148.98 -1.92 -5.00 16 18 Si 0.79 -1.51 30.80 68.60 2.11 0.61 16 19 C -0.13 -1.33 6.34 -20.21 -0.13 -1.46 16 20 C -0.01 -0.18 9.64 22.74 0.22 0.04 16 21 C -0.13 0.43 7.19 31.12 0.22 0.65 16 22 C 0.08 -0.10 4.38 31.12 0.14 0.03 16 23 H 0.11 -0.62 7.87 -2.39 -0.02 -0.64 16 24 O -0.38 -0.03 10.13 -148.98 -1.51 -1.54 16 25 C 0.02 -0.13 10.85 113.37 1.23 1.10 16 26 C -0.13 -0.83 6.63 31.12 0.21 -0.63 16 27 H 0.07 0.20 8.13 -2.38 -0.02 0.19 16 28 H 0.05 0.37 8.13 -2.39 -0.02 0.35 16 29 H 0.13 -0.21 8.14 -2.38 -0.02 -0.23 16 30 H 0.42 -1.07 6.68 -92.71 -0.62 -1.69 16 31 H 0.16 -1.10 6.37 -2.91 -0.02 -1.12 16 32 H 0.17 -1.28 8.06 -2.91 -0.02 -1.30 16 33 H 0.44 -3.29 8.96 -92.71 -0.83 -4.12 16 34 H 0.19 -0.30 6.30 -2.91 -0.02 -0.32 16 35 H 0.07 0.24 7.96 -2.39 -0.02 0.22 16 36 H 0.40 -2.06 8.74 -74.06 -0.65 -2.71 16 37 H -0.29 -0.84 7.11 99.48 0.71 -0.13 16 38 H -0.28 -0.63 7.04 99.48 0.70 0.07 16 39 H 0.11 1.82 7.64 -2.91 -0.02 1.79 16 40 H 0.13 -0.69 8.10 -2.38 -0.02 -0.71 16 41 H 0.12 -0.96 8.09 -2.39 -0.02 -0.98 16 42 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 43 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 44 H 0.06 -0.51 8.14 -2.39 -0.02 -0.53 16 45 H 0.07 0.85 7.20 -2.39 -0.02 0.83 16 46 H 0.11 0.78 7.35 -2.39 -0.02 0.76 16 Total: 0.00 -33.38 389.74 0.16 -33.22 By element: Atomic # 1 Polarization: -10.15 SS G_CDS: -1.00 Total: -11.15 kcal Atomic # 6 Polarization: 8.03 SS G_CDS: 5.77 Total: 13.80 kcal Atomic # 7 Polarization: -2.92 SS G_CDS: -3.05 Total: -5.97 kcal Atomic # 8 Polarization: -26.83 SS G_CDS: -3.68 Total: -30.50 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: 2.11 Total: 0.61 kcal Total: -33.38 0.16 -33.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.452 kcal (2) G-P(sol) polarization free energy of solvation -33.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.828 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.218 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds