Wall clock time and date at job start Sun Mar 7 2021 00:15:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34226 * 117.00351 * 2 1 4 4 O 1.20826 * 120.00082 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00018 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.84851 * 324.05899 * 5 3 2 7 7 C 1.34777 * 119.99781 * 293.63861 * 6 5 3 8 8 O 1.21510 * 120.00296 * 354.99052 * 7 6 5 9 9 C 1.48178 * 119.99714 * 174.98782 * 7 6 5 10 10 N 1.32710 * 119.72538 * 359.97438 * 9 7 6 11 11 C 1.31519 * 121.64724 * 180.02562 * 10 9 7 12 12 C 1.38564 * 120.90118 * 0.02562 * 11 10 9 13 13 C 1.50690 * 120.32519 * 179.97438 * 12 11 10 14 14 O 1.42902 * 109.47188 * 120.00188 * 13 12 11 15 15 Si 1.86301 * 109.47380 * 0.02562 * 13 12 11 16 16 C 1.38629 * 119.34883 * 359.97438 * 12 11 10 17 17 C 1.38590 * 118.49139 * 0.02562 * 16 12 11 18 18 C 1.53786 * 113.61258 * 192.86264 * 5 3 2 19 19 C 1.53781 * 87.07707 * 270.79780 * 18 5 3 20 20 H 1.08996 * 113.61437 * 89.11974 * 19 18 5 21 21 O 1.42903 * 113.61288 * 220.01906 * 19 18 5 22 22 C 1.42902 * 114.00126 * 210.00146 * 21 19 18 23 23 C 1.53774 * 87.08670 * 334.56712 * 19 18 5 24 24 H 1.09001 * 109.46924 * 300.00200 * 1 2 3 25 25 H 1.08994 * 109.47245 * 59.99865 * 1 2 3 26 26 H 1.08996 * 109.47702 * 180.02562 * 1 2 3 27 27 H 0.97002 * 120.00419 * 113.64973 * 6 5 3 28 28 H 1.08000 * 119.55401 * 179.72295 * 11 10 9 29 29 H 1.08993 * 109.47576 * 239.99865 * 13 12 11 30 30 H 0.96707 * 113.99805 * 299.99638 * 14 13 12 31 31 H 1.48496 * 110.00449 * 179.97438 * 15 13 12 32 32 H 1.48503 * 109.99955 * 301.32265 * 15 13 12 33 33 H 1.08000 * 120.75156 * 180.02562 * 16 12 11 34 34 H 1.08002 * 120.46900 * 180.02562 * 17 16 12 35 35 H 1.08993 * 113.61668 * 25.34591 * 18 5 3 36 36 H 1.08997 * 113.60763 * 156.16842 * 18 5 3 37 37 H 1.08996 * 109.47412 * 300.00225 * 22 21 19 38 38 H 1.09000 * 109.46799 * 60.00120 * 22 21 19 39 39 H 1.08999 * 109.47214 * 179.97438 * 22 21 19 40 40 H 1.08998 * 113.61832 * 270.88761 * 23 19 18 41 41 H 1.09006 * 113.61710 * 139.98052 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 7 4.1919 0.2128 0.7914 7 6 4.0242 0.1814 2.1283 8 8 3.4314 1.0826 2.6876 9 6 4.5626 -0.9522 2.9161 10 7 5.2087 -1.9339 2.2995 11 6 5.7015 -2.9581 2.9613 12 6 5.5623 -3.0500 4.3369 13 6 6.1316 -4.2296 5.0821 14 8 7.0904 -3.7717 6.0377 15 14 6.9594 -5.3846 3.8773 16 6 4.8943 -2.0461 5.0208 17 6 4.3855 -0.9790 4.2976 18 6 4.1098 2.6787 0.3132 19 6 4.0436 2.9561 -1.1980 20 1 3.0856 3.3592 -1.5263 21 8 5.1590 3.6999 -1.6928 22 6 4.8539 4.5248 -2.8191 23 6 4.1760 1.4379 -1.4030 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 4.7269 -0.4677 0.3536 28 1 6.2174 -3.7406 2.4248 29 1 5.3283 -4.7561 5.5972 30 1 7.8355 -3.2932 5.6490 31 1 7.5256 -6.5519 4.5998 32 1 5.9806 -5.8429 2.8588 33 1 4.7731 -2.0946 6.0929 34 1 3.8599 -0.1792 4.7980 35 1 3.4250 3.2909 0.8999 36 1 5.1235 2.6749 0.7138 37 1 4.4935 3.9026 -3.6382 38 1 4.0836 5.2452 -2.5438 39 1 5.7519 5.0563 -3.1341 40 1 5.2083 1.0950 -1.4728 41 1 3.5447 1.0483 -2.2016 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:17 Heat of formation + Delta-G solvation = -109.811684 kcal Electronic energy + Delta-G solvation = -27753.385125 eV Core-core repulsion = 23602.269894 eV Total energy + Delta-G solvation = -4151.115231 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.55123 -41.71726 -40.33935 -39.65798 -38.00722 -37.68693 -37.05507 -34.59752 -33.54426 -32.99043 -29.37519 -28.20631 -27.69447 -27.08333 -25.94165 -25.07208 -24.02375 -23.04510 -21.84319 -20.69175 -19.52272 -19.03578 -18.63602 -18.01601 -17.64350 -17.52440 -17.23024 -16.86421 -16.76662 -16.46086 -16.23389 -15.99188 -15.93831 -15.51645 -15.10660 -14.92319 -14.47532 -14.39719 -14.36815 -14.26989 -13.71848 -13.61255 -13.51219 -13.29786 -13.02443 -12.67854 -12.59784 -12.25011 -12.18759 -12.01315 -11.80091 -11.67854 -11.35323 -11.12251 -10.72743 -10.68620 -10.58669 -10.40361 -10.22879 -5.20192 -0.62782 0.01723 0.98399 1.07162 1.40891 1.47256 1.64635 1.79486 1.82747 2.63454 2.74923 2.90391 3.06865 3.21407 3.22244 3.38968 3.50216 3.54072 3.64381 3.70967 3.88517 4.00304 4.08885 4.14129 4.23524 4.26862 4.36413 4.36919 4.44936 4.48863 4.55083 4.57407 4.65992 4.76384 4.78465 4.82518 4.91928 4.96577 5.16406 5.30856 5.32941 6.14856 6.18832 6.35165 6.54269 6.65243 7.00432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.479 3.521 4 O -0.489 6.489 5 C 0.154 3.846 6 N -0.689 5.689 7 C 0.577 3.423 8 O -0.517 6.517 9 C 0.082 3.918 10 N -0.450 5.450 11 C 0.104 3.896 12 C -0.149 4.149 13 C -0.067 4.067 14 O -0.536 6.536 15 Si 0.688 3.312 16 C -0.053 4.053 17 C -0.106 4.106 18 C -0.111 4.111 19 C 0.065 3.935 20 H 0.102 0.898 21 O -0.370 6.370 22 C 0.027 3.973 23 C -0.140 4.140 24 H 0.065 0.935 25 H 0.066 0.934 26 H 0.104 0.896 27 H 0.420 0.580 28 H 0.165 0.835 29 H 0.121 0.879 30 H 0.381 0.619 31 H -0.249 1.249 32 H -0.252 1.252 33 H 0.148 0.852 34 H 0.153 0.847 35 H 0.097 0.903 36 H 0.111 0.889 37 H 0.044 0.956 38 H 0.045 0.955 39 H 0.089 0.911 40 H 0.120 0.880 41 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.937 -2.854 -2.871 5.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.319 3.681 4 O -0.374 6.374 5 C 0.065 3.935 6 N -0.344 5.344 7 C 0.362 3.638 8 O -0.391 6.391 9 C -0.056 4.056 10 N -0.161 5.161 11 C -0.056 4.056 12 C -0.151 4.151 13 C -0.179 4.179 14 O -0.341 6.341 15 Si 0.589 3.411 16 C -0.079 4.079 17 C -0.127 4.127 18 C -0.149 4.149 19 C 0.006 3.994 20 H 0.119 0.881 21 O -0.288 6.288 22 C -0.069 4.069 23 C -0.178 4.178 24 H 0.084 0.916 25 H 0.084 0.916 26 H 0.122 0.878 27 H 0.259 0.741 28 H 0.182 0.818 29 H 0.138 0.862 30 H 0.229 0.771 31 H -0.174 1.174 32 H -0.177 1.177 33 H 0.166 0.834 34 H 0.170 0.830 35 H 0.115 0.885 36 H 0.129 0.871 37 H 0.062 0.938 38 H 0.064 0.936 39 H 0.108 0.892 40 H 0.138 0.862 41 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.102 -2.934 -3.249 4.856 hybrid contribution -0.975 -0.268 0.913 1.363 sum 1.127 -3.202 -2.336 4.120 Atomic orbital electron populations 1.23359 0.75664 1.04093 1.02864 1.86510 1.23830 1.32692 1.83536 1.23119 0.90579 0.81889 0.72477 1.90693 1.66050 1.36314 1.44379 1.21055 0.85891 0.90910 0.95645 1.45547 1.52518 1.30033 1.06293 1.17933 0.79150 0.84737 0.81931 1.90853 1.41253 1.36554 1.70457 1.21005 0.98436 0.94167 0.91961 1.67496 1.07481 1.00898 1.40257 1.22628 0.96775 0.95466 0.90718 1.21677 0.99552 0.98376 0.95506 1.25055 0.95468 0.98652 0.98688 1.86540 1.36040 1.77186 1.34367 0.94755 0.86435 0.80630 0.79238 1.21555 0.93215 0.91742 1.01344 1.22222 0.97798 0.99077 0.93584 1.23498 1.03396 0.91636 0.96399 1.23579 0.91020 0.90120 0.94662 0.88053 1.87947 1.33376 1.59645 1.47793 1.22872 1.02144 0.93902 0.88016 1.23863 1.03349 0.97971 0.92655 0.91604 0.91554 0.87776 0.74142 0.81838 0.86180 0.77096 1.17355 1.17686 0.83385 0.82955 0.88476 0.87092 0.93770 0.93596 0.89226 0.86200 0.89370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 101.05 1.07 1.09 16 2 O -0.35 -1.03 10.42 -39.25 -0.41 -1.44 16 3 C 0.48 1.77 6.44 36.01 0.23 2.00 16 4 O -0.49 -2.82 15.11 -18.75 -0.28 -3.10 16 5 C 0.15 0.23 1.11 -132.16 -0.15 0.08 16 6 N -0.69 -0.64 5.12 -48.75 -0.25 -0.89 16 7 C 0.58 1.69 7.46 -12.18 -0.09 1.60 16 8 O -0.52 -3.00 15.36 5.36 0.08 -2.92 16 9 C 0.08 0.13 6.75 -83.01 -0.56 -0.43 16 10 N -0.45 -0.21 9.55 -9.80 -0.09 -0.30 16 11 C 0.10 -0.13 9.84 -17.57 -0.17 -0.30 16 12 C -0.15 0.22 5.40 -104.36 -0.56 -0.34 16 13 C -0.07 0.15 2.83 36.00 0.10 0.25 16 14 O -0.54 0.91 12.78 -35.23 -0.45 0.46 16 15 Si 0.69 -2.05 29.81 -169.99 -5.07 -7.12 16 16 C -0.05 0.04 9.76 -39.31 -0.38 -0.34 16 17 C -0.11 -0.07 9.63 -39.05 -0.38 -0.44 16 18 C -0.11 -0.22 6.15 -25.92 -0.16 -0.38 16 19 C 0.07 0.06 3.92 -25.92 -0.10 -0.05 16 20 H 0.10 0.10 7.35 -51.93 -0.38 -0.28 16 21 O -0.37 -0.59 10.71 -35.23 -0.38 -0.97 16 22 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 23 C -0.14 0.11 7.21 -25.92 -0.19 -0.07 16 24 H 0.07 0.08 8.13 -51.93 -0.42 -0.34 16 25 H 0.07 0.00 8.13 -51.93 -0.42 -0.43 16 26 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 27 H 0.42 -0.42 8.04 -40.82 -0.33 -0.75 16 28 H 0.17 -0.60 4.89 -52.49 -0.26 -0.85 16 29 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 30 H 0.38 -2.08 8.70 45.56 0.40 -1.68 16 31 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 32 H -0.25 0.20 7.11 56.52 0.40 0.60 16 33 H 0.15 -0.31 8.06 -52.49 -0.42 -0.73 16 34 H 0.15 0.06 7.64 -52.49 -0.40 -0.34 16 35 H 0.10 0.36 7.64 -51.93 -0.40 -0.03 16 36 H 0.11 0.18 8.14 -51.93 -0.42 -0.24 16 37 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 40 H 0.12 -0.25 8.14 -51.93 -0.42 -0.68 16 41 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 LS Contribution 354.51 15.07 5.34 5.34 Total: 0.00 -9.10 354.51 -6.96 -16.06 By element: Atomic # 1 Polarization: -3.67 SS G_CDS: -5.20 Total: -8.87 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: -0.25 Total: 3.75 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: -0.34 Total: -1.19 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -1.44 Total: -7.97 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.07 Total: -7.12 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -9.10 -6.96 -16.06 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.755 kcal (2) G-P(sol) polarization free energy of solvation -9.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds