Wall clock time and date at job start Sun Mar 7 2021 00:15:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34223 * 116.99962 * 2 1 4 4 O 1.20823 * 120.00157 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99835 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.91285 * 24.96011 * 5 3 2 7 7 C 1.34780 * 119.99821 * 74.87191 * 6 5 3 8 8 O 1.21587 * 119.99905 * 5.14765 * 7 6 5 9 9 C 1.47602 * 120.00238 * 185.14899 * 7 6 5 10 10 C 1.39720 * 120.08367 * 359.72200 * 9 7 6 11 11 C 1.37721 * 119.90543 * 179.74042 * 10 9 7 12 12 C 1.50700 * 119.95179 * 180.25593 * 11 10 9 13 13 C 1.38979 * 120.09090 * 0.51899 * 11 10 9 14 14 O 1.35705 * 119.91135 * 179.73884 * 13 11 10 15 15 C 1.39017 * 120.17528 * 359.76314 * 13 11 10 16 16 C 1.50696 * 119.95323 * 179.97438 * 15 13 11 17 17 O 1.42907 * 109.47206 * 75.02049 * 16 15 13 18 18 Si 1.86304 * 109.46822 * 195.01751 * 16 15 13 19 19 C 1.37678 * 120.08769 * 359.97272 * 15 13 11 20 20 C 1.53959 * 113.61463 * 253.63221 * 5 3 2 21 21 C 1.53772 * 87.11300 * 270.84522 * 20 5 3 22 22 H 1.09001 * 113.69481 * 89.19647 * 21 20 5 23 23 O 1.42907 * 113.61497 * 220.09035 * 21 20 5 24 24 C 1.42899 * 113.99685 * 247.49785 * 23 21 20 25 25 C 1.53778 * 87.08278 * 334.63495 * 21 20 5 26 26 H 1.08994 * 109.46910 * 299.99787 * 1 2 3 27 27 H 1.08998 * 109.46855 * 60.00524 * 1 2 3 28 28 H 1.09004 * 109.47043 * 179.97438 * 1 2 3 29 29 H 0.96992 * 120.00058 * 254.88507 * 6 5 3 30 30 H 1.07994 * 120.04683 * 359.97438 * 10 9 7 31 31 H 1.09003 * 109.47493 * 270.25962 * 12 11 10 32 32 H 1.09000 * 109.47410 * 30.26257 * 12 11 10 33 33 H 1.09008 * 109.46796 * 150.26310 * 12 11 10 34 34 H 0.96703 * 114.00478 * 270.02494 * 14 13 11 35 35 H 1.08991 * 109.47310 * 315.01956 * 16 15 13 36 36 H 0.96694 * 114.00103 * 300.00193 * 17 16 15 37 37 H 1.48495 * 109.99982 * 60.00198 * 18 16 15 38 38 H 1.48497 * 109.99846 * 181.32015 * 18 16 15 39 39 H 1.08002 * 120.04678 * 179.97438 * 19 15 13 40 40 H 1.09002 * 113.53386 * 156.28899 * 20 5 3 41 41 H 1.09000 * 113.73818 * 25.43078 * 20 5 3 42 42 H 1.09000 * 109.46739 * 179.97438 * 24 23 21 43 43 H 1.08992 * 109.47379 * 299.99663 * 24 23 21 44 44 H 1.09004 * 109.47146 * 60.00003 * 24 23 21 45 45 H 1.08998 * 113.61700 * 139.97867 * 25 21 20 46 46 H 1.09002 * 113.62017 * 270.80410 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1997 0.0830 -0.5705 7 6 4.1911 -0.1122 -1.9041 8 8 3.7416 0.7442 -2.6409 9 6 4.7275 -1.3654 -2.4701 10 6 5.2498 -2.3482 -1.6254 11 6 5.7444 -3.5184 -2.1570 12 6 6.3027 -4.5816 -1.2465 13 6 5.7343 -3.7179 -3.5324 14 8 6.2274 -4.8702 -4.0526 15 6 5.2208 -2.7400 -4.3765 16 6 5.2129 -2.9613 -5.8671 17 8 4.1786 -3.8875 -6.2057 18 14 4.9039 -1.3413 -6.7338 19 6 4.7196 -1.5697 -3.8525 20 6 4.1619 1.7038 1.3528 21 6 4.0339 3.1551 0.8610 22 1 3.0739 3.6144 1.0969 23 8 5.1457 3.9799 1.2155 24 6 4.8313 5.0042 2.1610 25 6 4.1139 2.5947 -0.5688 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 4.6250 -0.5656 0.0118 30 1 5.2622 -2.1920 -0.5569 31 1 7.3684 -4.4083 -1.0961 32 1 5.7893 -4.5435 -0.2857 33 1 6.1544 -5.5621 -1.6991 34 1 7.1708 -4.8350 -4.2626 35 1 6.1767 -3.3627 -6.1800 36 1 4.2753 -4.7547 -5.7890 37 1 5.9727 -0.3695 -6.3899 38 1 4.8620 -1.5513 -8.2032 39 1 4.3212 -0.8102 -4.5090 40 1 5.1930 1.3807 1.4965 41 1 3.5236 1.4738 2.2058 42 1 5.7274 5.5856 2.3781 43 1 4.0648 5.6587 1.7462 44 1 4.4622 4.5493 3.0803 45 1 3.4356 3.0837 -1.2680 46 1 5.1317 2.5167 -0.9510 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:23 Heat of formation + Delta-G solvation = -171.880670 kcal Electronic energy + Delta-G solvation = -32428.461655 eV Core-core repulsion = 27865.861011 eV Total energy + Delta-G solvation = -4562.600644 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.56300 -41.61506 -40.44922 -39.74145 -37.83395 -37.68956 -37.56768 -37.01740 -34.52204 -34.02896 -31.77647 -29.28044 -28.17249 -27.93543 -27.13163 -26.91525 -26.21767 -24.60909 -22.99809 -22.25115 -21.47798 -20.71410 -19.67270 -19.33830 -18.83382 -18.07240 -17.91781 -17.56270 -17.45521 -17.25331 -16.86804 -16.82697 -16.15115 -16.00622 -15.85651 -15.54327 -15.29268 -15.05607 -14.87050 -14.64295 -14.47952 -14.39581 -14.05543 -13.80707 -13.73968 -13.55244 -13.47997 -13.24159 -13.10284 -13.05378 -12.88863 -12.57487 -12.29019 -12.26873 -12.01878 -11.94792 -11.81248 -11.67949 -11.26099 -11.19030 -10.94054 -10.59503 -10.39094 -10.02246 -9.76874 -4.81613 -0.47922 0.02112 0.98019 1.37909 1.42989 1.64076 1.70035 1.76829 2.00675 2.51764 2.77503 2.90254 3.03213 3.19858 3.34783 3.42305 3.50927 3.52646 3.66424 3.84739 3.91749 4.01976 4.04150 4.14695 4.21328 4.24426 4.29526 4.33705 4.35485 4.43903 4.46159 4.51527 4.53602 4.56878 4.58241 4.64431 4.77065 4.77972 4.91514 4.96069 5.01717 5.03289 5.12452 5.17665 5.31773 5.43967 6.14519 6.23444 6.36361 6.56649 6.62945 7.02383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.349 6.349 3 C 0.478 3.522 4 O -0.492 6.492 5 C 0.154 3.846 6 N -0.706 5.706 7 C 0.566 3.434 8 O -0.518 6.518 9 C -0.132 4.132 10 C -0.066 4.066 11 C -0.112 4.112 12 C -0.115 4.115 13 C 0.144 3.856 14 O -0.492 6.492 15 C -0.143 4.143 16 C -0.069 4.069 17 O -0.533 6.533 18 Si 0.736 3.264 19 C -0.039 4.039 20 C -0.140 4.140 21 C 0.064 3.936 22 H 0.105 0.895 23 O -0.371 6.371 24 C 0.027 3.973 25 C -0.104 4.104 26 H 0.065 0.935 27 H 0.066 0.934 28 H 0.105 0.895 29 H 0.408 0.592 30 H 0.134 0.866 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.077 0.923 34 H 0.396 0.604 35 H 0.072 0.928 36 H 0.369 0.631 37 H -0.248 1.248 38 H -0.251 1.251 39 H 0.147 0.853 40 H 0.118 0.882 41 H 0.087 0.913 42 H 0.089 0.911 43 H 0.046 0.954 44 H 0.043 0.957 45 H 0.095 0.905 46 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.614 -2.950 5.519 6.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.318 3.682 4 O -0.378 6.378 5 C 0.065 3.935 6 N -0.360 5.360 7 C 0.354 3.646 8 O -0.393 6.393 9 C -0.136 4.136 10 C -0.085 4.085 11 C -0.113 4.113 12 C -0.171 4.171 13 C 0.098 3.902 14 O -0.303 6.303 15 C -0.144 4.144 16 C -0.178 4.178 17 O -0.338 6.338 18 Si 0.634 3.366 19 C -0.057 4.057 20 C -0.178 4.178 21 C 0.005 3.995 22 H 0.123 0.877 23 O -0.289 6.289 24 C -0.069 4.069 25 C -0.142 4.142 26 H 0.084 0.916 27 H 0.085 0.915 28 H 0.123 0.877 29 H 0.245 0.755 30 H 0.152 0.848 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.096 0.904 34 H 0.254 0.746 35 H 0.090 0.910 36 H 0.218 0.782 37 H -0.172 1.172 38 H -0.176 1.176 39 H 0.164 0.836 40 H 0.136 0.864 41 H 0.105 0.895 42 H 0.107 0.893 43 H 0.065 0.935 44 H 0.062 0.938 45 H 0.114 0.886 46 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 1.737 -1.183 4.057 4.569 hybrid contribution 1.147 -1.619 0.919 2.187 sum 2.884 -2.803 4.977 6.398 Atomic orbital electron populations 1.23370 0.75584 1.04170 1.02863 1.86503 1.23883 1.32640 1.83444 1.23197 0.90626 0.81926 0.72403 1.90695 1.66032 1.36342 1.44705 1.21061 0.85645 0.87904 0.98883 1.45598 1.58684 1.24491 1.07266 1.18174 0.78240 0.86361 0.81782 1.90842 1.45547 1.44032 1.58919 1.19742 1.04618 0.95124 0.94074 1.21106 0.95804 0.92063 0.99525 1.20167 1.01153 0.96322 0.93622 1.20745 1.00937 0.97180 0.98277 1.18335 0.96446 0.85255 0.90143 1.84708 1.29888 1.31987 1.83747 1.20628 1.02410 0.94214 0.97116 1.25300 0.93929 1.04924 0.93645 1.86750 1.48382 1.25887 1.72796 0.92554 0.89866 0.75043 0.79107 1.20924 0.94931 0.95886 0.93963 1.23878 1.03193 0.97032 0.93689 1.23646 0.91208 0.89361 0.95288 0.87718 1.87942 1.33382 1.45437 1.62131 1.22867 1.02066 0.90329 0.91644 1.23418 1.03428 0.90488 0.96885 0.91629 0.91510 0.87709 0.75511 0.84840 0.90827 0.90911 0.90401 0.74625 0.91027 0.78240 1.17247 1.17576 0.83619 0.86414 0.89478 0.89279 0.93548 0.93806 0.88600 0.87134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.71 10.29 -39.24 -0.40 -1.11 16 3 C 0.48 1.35 7.00 36.00 0.25 1.60 16 4 O -0.49 -2.43 14.99 -18.75 -0.28 -2.71 16 5 C 0.15 0.10 1.16 -132.06 -0.15 -0.05 16 6 N -0.71 0.41 4.93 -48.84 -0.24 0.17 16 7 C 0.57 1.09 7.48 -12.44 -0.09 0.99 16 8 O -0.52 -2.68 15.27 5.29 0.08 -2.59 16 9 C -0.13 -0.09 5.88 -104.96 -0.62 -0.71 16 10 C -0.07 0.10 9.18 -39.22 -0.36 -0.26 16 11 C -0.11 0.13 5.89 -104.54 -0.62 -0.48 16 12 C -0.11 0.34 9.78 36.01 0.35 0.69 16 13 C 0.14 -0.06 6.62 -39.02 -0.26 -0.31 16 14 O -0.49 0.91 11.41 -18.82 -0.21 0.69 16 15 C -0.14 -0.10 5.27 -104.54 -0.55 -0.65 16 16 C -0.07 -0.05 2.33 36.00 0.08 0.03 16 17 O -0.53 -1.03 12.65 -35.23 -0.45 -1.48 16 18 Si 0.74 0.87 30.17 -169.99 -5.13 -4.26 16 19 C -0.04 -0.05 8.20 -39.22 -0.32 -0.38 16 20 C -0.14 0.20 7.25 -25.83 -0.19 0.01 16 21 C 0.06 0.04 3.90 -25.92 -0.10 -0.06 16 22 H 0.11 0.10 7.05 -51.93 -0.37 -0.27 16 23 O -0.37 -0.55 10.71 -35.23 -0.38 -0.92 16 24 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 25 C -0.10 -0.17 5.59 -25.92 -0.14 -0.32 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 28 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.41 -1.49 6.80 -40.82 -0.28 -1.77 16 30 H 0.13 -0.59 6.41 -52.49 -0.34 -0.92 16 31 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 32 H 0.07 -0.27 8.08 -51.93 -0.42 -0.69 16 33 H 0.08 -0.18 7.52 -51.92 -0.39 -0.57 16 34 H 0.40 -2.25 9.06 45.56 0.41 -1.84 16 35 H 0.07 -0.03 7.82 -51.93 -0.41 -0.44 16 36 H 0.37 -0.04 8.60 45.56 0.39 0.35 16 37 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 38 H -0.25 -0.91 7.11 56.52 0.40 -0.51 16 39 H 0.15 0.19 4.70 -52.49 -0.25 -0.05 16 40 H 0.12 -0.33 8.14 -51.93 -0.42 -0.76 16 41 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 42 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 43 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.10 0.33 7.85 -51.93 -0.41 -0.08 16 46 H 0.11 0.18 8.14 -51.93 -0.42 -0.24 16 LS Contribution 386.81 15.07 5.83 5.83 Total: 0.00 -9.35 386.81 -7.20 -16.55 By element: Atomic # 1 Polarization: -6.94 SS G_CDS: -5.47 Total: -12.41 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -0.55 Total: 2.24 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.24 Total: 0.17 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.64 Total: -8.12 kcal Atomic # 14 Polarization: 0.87 SS G_CDS: -5.13 Total: -4.26 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.35 -7.20 -16.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.332 kcal (2) G-P(sol) polarization free energy of solvation -9.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.679 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.549 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds