Wall clock time and date at job start Sun Mar 7 2021 00:15:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34223 * 116.99962 * 2 1 4 4 O 1.20823 * 120.00157 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99835 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.91285 * 24.96011 * 5 3 2 7 7 C 1.34780 * 119.99821 * 74.87191 * 6 5 3 8 8 O 1.21587 * 119.99905 * 5.14765 * 7 6 5 9 9 C 1.47602 * 120.00238 * 185.14899 * 7 6 5 10 10 C 1.39720 * 120.08367 * 359.72200 * 9 7 6 11 11 C 1.37721 * 119.90543 * 179.74042 * 10 9 7 12 12 C 1.50700 * 119.95179 * 180.25593 * 11 10 9 13 13 C 1.38979 * 120.09090 * 0.51899 * 11 10 9 14 14 O 1.35705 * 119.91135 * 179.73884 * 13 11 10 15 15 C 1.39017 * 120.17528 * 359.76314 * 13 11 10 16 16 C 1.50696 * 119.95323 * 179.97438 * 15 13 11 17 17 O 1.42907 * 109.47206 * 75.02049 * 16 15 13 18 18 Si 1.86304 * 109.46822 * 195.01751 * 16 15 13 19 19 C 1.37678 * 120.08769 * 359.97272 * 15 13 11 20 20 C 1.53959 * 113.61463 * 253.63221 * 5 3 2 21 21 C 1.53772 * 87.11300 * 270.84522 * 20 5 3 22 22 H 1.09001 * 113.69481 * 89.19647 * 21 20 5 23 23 O 1.42907 * 113.61497 * 220.09035 * 21 20 5 24 24 C 1.42899 * 113.99685 * 247.49785 * 23 21 20 25 25 C 1.53778 * 87.08278 * 334.63495 * 21 20 5 26 26 H 1.08994 * 109.46910 * 299.99787 * 1 2 3 27 27 H 1.08998 * 109.46855 * 60.00524 * 1 2 3 28 28 H 1.09004 * 109.47043 * 179.97438 * 1 2 3 29 29 H 0.96992 * 120.00058 * 254.88507 * 6 5 3 30 30 H 1.07994 * 120.04683 * 359.97438 * 10 9 7 31 31 H 1.09003 * 109.47493 * 270.25962 * 12 11 10 32 32 H 1.09000 * 109.47410 * 30.26257 * 12 11 10 33 33 H 1.09008 * 109.46796 * 150.26310 * 12 11 10 34 34 H 0.96703 * 114.00478 * 270.02494 * 14 13 11 35 35 H 1.08991 * 109.47310 * 315.01956 * 16 15 13 36 36 H 0.96694 * 114.00103 * 300.00193 * 17 16 15 37 37 H 1.48495 * 109.99982 * 60.00198 * 18 16 15 38 38 H 1.48497 * 109.99846 * 181.32015 * 18 16 15 39 39 H 1.08002 * 120.04678 * 179.97438 * 19 15 13 40 40 H 1.09002 * 113.53386 * 156.28899 * 20 5 3 41 41 H 1.09000 * 113.73818 * 25.43078 * 20 5 3 42 42 H 1.09000 * 109.46739 * 179.97438 * 24 23 21 43 43 H 1.08992 * 109.47379 * 299.99663 * 24 23 21 44 44 H 1.09004 * 109.47146 * 60.00003 * 24 23 21 45 45 H 1.08998 * 113.61700 * 139.97867 * 25 21 20 46 46 H 1.09002 * 113.62017 * 270.80410 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1997 0.0830 -0.5705 7 6 4.1911 -0.1122 -1.9041 8 8 3.7416 0.7442 -2.6409 9 6 4.7275 -1.3654 -2.4701 10 6 5.2498 -2.3482 -1.6254 11 6 5.7444 -3.5184 -2.1570 12 6 6.3027 -4.5816 -1.2465 13 6 5.7343 -3.7179 -3.5324 14 8 6.2274 -4.8702 -4.0526 15 6 5.2208 -2.7400 -4.3765 16 6 5.2129 -2.9613 -5.8671 17 8 4.1786 -3.8875 -6.2057 18 14 4.9039 -1.3413 -6.7338 19 6 4.7196 -1.5697 -3.8525 20 6 4.1619 1.7038 1.3528 21 6 4.0339 3.1551 0.8610 22 1 3.0739 3.6144 1.0969 23 8 5.1457 3.9799 1.2155 24 6 4.8313 5.0042 2.1610 25 6 4.1139 2.5947 -0.5688 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 4.6250 -0.5656 0.0118 30 1 5.2622 -2.1920 -0.5569 31 1 7.3684 -4.4083 -1.0961 32 1 5.7893 -4.5435 -0.2857 33 1 6.1544 -5.5621 -1.6991 34 1 7.1708 -4.8350 -4.2626 35 1 6.1767 -3.3627 -6.1800 36 1 4.2753 -4.7547 -5.7890 37 1 5.9727 -0.3695 -6.3899 38 1 4.8620 -1.5513 -8.2032 39 1 4.3212 -0.8102 -4.5090 40 1 5.1930 1.3807 1.4965 41 1 3.5236 1.4738 2.2058 42 1 5.7274 5.5856 2.3781 43 1 4.0648 5.6587 1.7462 44 1 4.4622 4.5493 3.0803 45 1 3.4356 3.0837 -1.2680 46 1 5.1317 2.5167 -0.9510 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:22 Heat of formation + Delta-G solvation = -175.098443 kcal Electronic energy + Delta-G solvation = -32428.601189 eV Core-core repulsion = 27865.861011 eV Total energy + Delta-G solvation = -4562.740178 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.66692 -41.59323 -40.54534 -39.80299 -37.84844 -37.74649 -37.59402 -37.14810 -34.58211 -33.95604 -31.74078 -29.33036 -28.00326 -27.89535 -27.14445 -26.92607 -26.23126 -24.65583 -23.06722 -22.18807 -21.50547 -20.82116 -19.58708 -19.36889 -18.88683 -18.19889 -18.00352 -17.61748 -17.44980 -17.36364 -16.84550 -16.76172 -16.19938 -16.06001 -15.92688 -15.61243 -15.29579 -15.11026 -14.85766 -14.64032 -14.49191 -14.28641 -14.12930 -13.74425 -13.73001 -13.59165 -13.37339 -13.26126 -13.07247 -12.92354 -12.82412 -12.55875 -12.38958 -12.28392 -12.15055 -12.04419 -11.94173 -11.79332 -11.35157 -11.20526 -11.03531 -10.60516 -10.48936 -9.95817 -9.69428 -4.95304 -0.44148 0.07922 0.80483 1.26702 1.36086 1.51299 1.61643 1.74303 1.81328 2.53457 2.77816 3.02366 3.05749 3.16767 3.38294 3.41781 3.47359 3.60279 3.64835 3.85328 3.99327 4.01848 4.06305 4.19212 4.23914 4.31066 4.40763 4.41450 4.47126 4.53973 4.55086 4.61726 4.62536 4.67294 4.70857 4.75737 4.79632 4.84019 4.87419 5.02027 5.07792 5.09077 5.19537 5.22438 5.31199 5.58941 6.15078 6.28288 6.46530 6.57632 6.65246 6.98245 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.352 6.352 3 C 0.474 3.526 4 O -0.521 6.521 5 C 0.153 3.847 6 N -0.689 5.689 7 C 0.565 3.435 8 O -0.560 6.560 9 C -0.146 4.146 10 C -0.054 4.054 11 C -0.115 4.115 12 C -0.112 4.112 13 C 0.148 3.852 14 O -0.496 6.496 15 C -0.154 4.154 16 C -0.065 4.065 17 O -0.547 6.547 18 Si 0.769 3.231 19 C -0.057 4.057 20 C -0.120 4.120 21 C 0.063 3.937 22 H 0.097 0.903 23 O -0.387 6.387 24 C 0.022 3.978 25 C -0.109 4.109 26 H 0.070 0.930 27 H 0.054 0.946 28 H 0.131 0.869 29 H 0.425 0.575 30 H 0.166 0.834 31 H 0.086 0.914 32 H 0.085 0.915 33 H 0.071 0.929 34 H 0.414 0.586 35 H 0.087 0.913 36 H 0.378 0.622 37 H -0.269 1.269 38 H -0.286 1.286 39 H 0.136 0.864 40 H 0.139 0.861 41 H 0.104 0.896 42 H 0.098 0.902 43 H 0.044 0.956 44 H 0.056 0.944 45 H 0.068 0.932 46 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.656 -4.841 7.837 9.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.267 6.267 3 C 0.316 3.684 4 O -0.409 6.409 5 C 0.064 3.936 6 N -0.344 5.344 7 C 0.354 3.646 8 O -0.439 6.439 9 C -0.149 4.149 10 C -0.072 4.072 11 C -0.116 4.116 12 C -0.168 4.168 13 C 0.103 3.897 14 O -0.310 6.310 15 C -0.155 4.155 16 C -0.174 4.174 17 O -0.354 6.354 18 Si 0.672 3.328 19 C -0.075 4.075 20 C -0.157 4.157 21 C 0.004 3.996 22 H 0.115 0.885 23 O -0.306 6.306 24 C -0.074 4.074 25 C -0.148 4.148 26 H 0.089 0.911 27 H 0.073 0.927 28 H 0.150 0.850 29 H 0.266 0.734 30 H 0.184 0.816 31 H 0.104 0.896 32 H 0.104 0.896 33 H 0.090 0.910 34 H 0.275 0.725 35 H 0.104 0.896 36 H 0.228 0.772 37 H -0.194 1.194 38 H -0.213 1.213 39 H 0.153 0.847 40 H 0.157 0.843 41 H 0.122 0.878 42 H 0.117 0.883 43 H 0.063 0.937 44 H 0.075 0.925 45 H 0.086 0.914 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 2.801 -3.108 6.414 7.657 hybrid contribution 0.820 -1.038 0.148 1.331 sum 3.622 -4.145 6.561 8.564 Atomic orbital electron populations 1.23588 0.74591 1.05856 1.02571 1.86496 1.24969 1.32173 1.83089 1.23639 0.91468 0.81747 0.71539 1.90678 1.66846 1.37243 1.46136 1.21019 0.84634 0.87741 1.00207 1.45430 1.57878 1.24394 1.06720 1.18444 0.77622 0.86327 0.82229 1.90826 1.47572 1.45467 1.60052 1.19696 1.05871 0.95271 0.94060 1.21409 0.93985 0.91043 1.00808 1.20428 1.00794 0.96825 0.93527 1.20778 1.01754 0.96012 0.98267 1.18410 0.95789 0.85019 0.90520 1.84664 1.31473 1.31175 1.83699 1.20561 1.03436 0.94578 0.96934 1.25162 0.94240 1.04066 0.93981 1.86714 1.48932 1.26600 1.73193 0.91958 0.89261 0.75045 0.76562 1.20978 0.95783 0.96195 0.94569 1.23849 1.04511 0.94653 0.92716 1.23607 0.90769 0.90601 0.94634 0.88516 1.87909 1.33756 1.46053 1.62843 1.23013 1.02624 0.90097 0.91709 1.23384 1.02637 0.91529 0.97223 0.91100 0.92690 0.85043 0.73449 0.81642 0.89565 0.89602 0.90975 0.72545 0.89572 0.77209 1.19446 1.21324 0.84682 0.84252 0.87775 0.88327 0.93735 0.92533 0.91369 0.87314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.20 16 2 O -0.35 -1.45 10.29 -51.35 -0.53 -1.98 16 3 C 0.47 3.06 7.00 71.24 0.50 3.56 16 4 O -0.52 -6.05 14.99 21.97 0.33 -5.72 16 5 C 0.15 0.23 1.16 3.44 0.00 0.23 16 6 N -0.69 1.18 4.93 -426.69 -2.11 -0.92 16 7 C 0.56 2.55 7.48 86.71 0.65 3.20 16 8 O -0.56 -7.09 15.27 -3.99 -0.06 -7.15 16 9 C -0.15 -0.21 5.88 -20.08 -0.12 -0.33 16 10 C -0.05 0.26 9.18 22.51 0.21 0.46 16 11 C -0.12 0.50 5.89 -19.81 -0.12 0.38 16 12 C -0.11 0.96 9.78 71.24 0.70 1.66 16 13 C 0.15 -0.27 6.62 22.63 0.15 -0.12 16 14 O -0.50 2.54 11.41 -90.25 -1.03 1.51 16 15 C -0.15 -0.25 5.27 -19.81 -0.10 -0.35 16 16 C -0.06 -0.14 2.33 71.23 0.17 0.03 16 17 O -0.55 -2.34 12.65 -148.98 -1.89 -4.22 16 18 Si 0.77 3.47 30.17 68.60 2.07 5.54 16 19 C -0.06 -0.22 8.20 22.50 0.18 -0.03 16 20 C -0.12 0.49 7.25 31.18 0.23 0.72 16 21 C 0.06 0.11 3.90 31.12 0.12 0.23 16 22 H 0.10 0.30 7.05 -2.39 -0.02 0.29 16 23 O -0.39 -1.18 10.71 -148.98 -1.60 -2.78 16 24 C 0.02 -0.03 10.85 113.37 1.23 1.20 16 25 C -0.11 -0.54 5.59 31.12 0.17 -0.37 16 26 H 0.07 -0.07 8.13 -2.39 -0.02 -0.09 16 27 H 0.05 0.13 8.13 -2.39 -0.02 0.11 16 28 H 0.13 -0.76 8.14 -2.38 -0.02 -0.78 16 29 H 0.42 -4.01 6.80 -92.71 -0.63 -4.64 16 30 H 0.17 -2.01 6.41 -2.91 -0.02 -2.02 16 31 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 32 H 0.09 -0.93 8.08 -2.39 -0.02 -0.95 16 33 H 0.07 -0.49 7.52 -2.38 -0.02 -0.51 16 34 H 0.41 -5.40 9.06 -74.06 -0.67 -6.07 16 35 H 0.09 -0.08 7.82 -2.39 -0.02 -0.10 16 36 H 0.38 -0.12 8.60 -74.06 -0.64 -0.76 16 37 H -0.27 -2.04 7.11 99.48 0.71 -1.33 16 38 H -0.29 -2.89 7.11 99.48 0.71 -2.19 16 39 H 0.14 0.69 4.70 -2.91 -0.01 0.68 16 40 H 0.14 -1.15 8.14 -2.39 -0.02 -1.17 16 41 H 0.10 -0.72 8.10 -2.39 -0.02 -0.74 16 42 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 43 H 0.04 -0.06 8.14 -2.39 -0.02 -0.08 16 44 H 0.06 -0.24 8.14 -2.38 -0.02 -0.26 16 45 H 0.07 0.70 7.85 -2.39 -0.02 0.68 16 46 H 0.11 0.53 8.14 -2.39 -0.02 0.51 16 Total: 0.00 -24.34 386.81 -0.49 -24.82 By element: Atomic # 1 Polarization: -19.91 SS G_CDS: -0.84 Total: -20.75 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: 5.16 Total: 11.66 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -2.11 Total: -0.92 kcal Atomic # 8 Polarization: -15.57 SS G_CDS: -4.77 Total: -20.34 kcal Atomic # 14 Polarization: 3.47 SS G_CDS: 2.07 Total: 5.54 kcal Total: -24.34 -0.49 -24.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.278 kcal (2) G-P(sol) polarization free energy of solvation -24.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.821 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds