Wall clock time and date at job start Sun Mar 7 2021 00:15:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34235 * 117.00346 * 2 1 4 4 O 1.20828 * 119.99353 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00272 * 180.02562 * 3 2 1 6 6 N 1.46493 * 112.84731 * 25.02763 * 5 3 2 7 7 C 1.34772 * 120.00356 * 74.82236 * 6 5 3 8 8 O 1.21593 * 119.99821 * 5.13986 * 7 6 5 9 9 C 1.47559 * 120.00230 * 185.14069 * 7 6 5 10 10 C 1.39839 * 119.99992 * 359.72136 * 9 7 6 11 11 C 1.36564 * 119.99652 * 179.74113 * 10 9 7 12 12 C 1.39824 * 120.00319 * 0.55872 * 11 10 9 13 13 C 1.47552 * 120.00053 * 179.71944 * 12 11 10 14 14 C 1.34979 * 125.27673 * 359.97438 * 13 12 11 15 15 C 1.37806 * 114.70342 * 179.97438 * 14 13 12 16 16 C 1.33740 * 115.07950 * 359.97438 * 15 14 13 17 17 C 1.50690 * 125.12015 * 180.02562 * 16 15 14 18 18 O 1.42897 * 109.47305 * 299.99894 * 17 16 15 19 19 Si 1.86302 * 109.47378 * 179.97438 * 17 16 15 20 20 S 1.75859 * 109.76206 * 359.77230 * 16 15 14 21 21 C 1.39828 * 119.99910 * 359.69428 * 12 11 10 22 22 C 1.36562 * 120.00158 * 0.02562 * 21 12 11 23 23 C 1.54053 * 113.61029 * 253.71287 * 5 3 2 24 24 C 1.53786 * 86.98428 * 270.88522 * 23 5 3 25 25 H 1.08994 * 113.60981 * 89.16402 * 24 23 5 26 26 O 1.42900 * 113.61049 * 219.98099 * 24 23 5 27 27 C 1.42893 * 113.99887 * 249.13454 * 26 24 23 28 28 C 1.53778 * 113.61085 * 156.22141 * 5 3 2 29 29 H 1.09000 * 109.47402 * 59.99722 * 1 2 3 30 30 H 1.09002 * 109.47282 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.46727 * 299.99494 * 1 2 3 32 32 H 0.97005 * 119.99454 * 254.81471 * 6 5 3 33 33 H 1.07998 * 119.99683 * 0.02562 * 10 9 7 34 34 H 1.08001 * 120.00020 * 180.27849 * 11 10 9 35 35 H 1.08006 * 122.64980 * 359.93923 * 14 13 12 36 36 H 1.07993 * 122.45813 * 179.97438 * 15 14 13 37 37 H 1.09001 * 109.47484 * 59.99909 * 17 16 15 38 38 H 0.96698 * 113.99999 * 299.99588 * 18 17 16 39 39 H 1.48499 * 110.00161 * 179.97438 * 19 17 16 40 40 H 1.48494 * 110.00185 * 301.31989 * 19 17 16 41 41 H 1.07994 * 119.99644 * 180.02562 * 21 12 11 42 42 H 1.07998 * 119.99833 * 180.02562 * 22 21 12 43 43 H 1.09001 * 113.60876 * 156.38423 * 23 5 3 44 44 H 1.08998 * 113.69719 * 25.39979 * 23 5 3 45 45 H 1.08998 * 109.47263 * 60.00834 * 27 26 24 46 46 H 1.09009 * 109.47268 * 180.02562 * 27 26 24 47 47 H 1.08998 * 109.47778 * 300.00679 * 27 26 24 48 48 H 1.08993 * 113.61719 * 334.56928 * 28 5 3 49 49 H 1.08999 * 113.61544 * 203.66405 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 7 4.1982 0.0832 -0.5722 7 6 4.1879 -0.1110 -1.9058 8 8 3.7378 0.7461 -2.6415 9 6 4.7227 -1.3638 -2.4731 10 6 5.2456 -2.3471 -1.6274 11 6 5.7357 -3.5088 -2.1522 12 6 5.7254 -3.7101 -3.5358 13 6 6.2606 -4.9626 -4.1031 14 6 6.7840 -5.9810 -3.3884 15 6 7.2197 -7.0493 -4.1420 16 6 7.0576 -6.9150 -5.4627 17 6 7.4522 -7.9411 -6.4933 18 8 8.8580 -8.1837 -6.4101 19 14 7.0304 -7.3075 -8.1938 20 16 6.3080 -5.3637 -5.8151 21 6 5.2074 -2.7246 -4.3818 22 6 4.7120 -1.5654 -3.8568 23 6 4.1623 1.7022 1.3542 24 6 4.0319 3.1533 0.8619 25 1 3.0707 3.6097 1.0981 26 8 5.1415 3.9804 1.2179 27 6 4.8322 4.9807 2.1903 28 6 4.1137 2.5949 -0.5687 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 4.6240 -0.5661 0.0093 33 1 5.2575 -2.1898 -0.5591 34 1 6.1354 -4.2701 -1.4987 35 1 6.8562 -5.9600 -2.3109 36 1 7.6597 -7.9303 -3.6986 37 1 6.9118 -8.8693 -6.3075 38 1 9.4023 -7.3996 -6.5652 39 1 7.4153 -8.3101 -9.2193 40 1 5.5760 -7.0216 -8.2830 41 1 5.1991 -2.8803 -5.4505 42 1 4.3116 -0.8044 -4.5103 43 1 5.1940 1.3810 1.4981 44 1 3.5232 1.4712 2.2064 45 1 4.4813 4.5024 3.1047 46 1 5.7260 5.5662 2.4062 47 1 4.0535 5.6369 1.8017 48 1 3.4355 3.0840 -1.2677 49 1 5.1321 2.5174 -0.9495 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:38 Heat of formation + Delta-G solvation = -89.513694 kcal Electronic energy + Delta-G solvation = -34865.314235 eV Core-core repulsion = 30045.677548 eV Total energy + Delta-G solvation = -4819.636687 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.122 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.54172 -41.12842 -40.20570 -39.62119 -38.97917 -37.71125 -37.42518 -37.01672 -34.60278 -33.33914 -32.27489 -30.54758 -29.29469 -27.98360 -27.35110 -27.10104 -25.99138 -24.69691 -24.02722 -23.50661 -22.96132 -21.67727 -20.71621 -20.30533 -19.61302 -18.92179 -18.66061 -17.98439 -17.63103 -17.54541 -17.27192 -16.97215 -16.69977 -16.39203 -16.26875 -16.13546 -16.08108 -15.87763 -15.52990 -15.23368 -15.06807 -14.89862 -14.55146 -14.48546 -14.40015 -14.24980 -13.94152 -13.74450 -13.65743 -13.54067 -13.38196 -13.24016 -13.11801 -13.04854 -12.61296 -12.57179 -12.29781 -12.25723 -12.13811 -11.99875 -11.82692 -11.68188 -11.61456 -10.97630 -10.83563 -10.59727 -10.56609 -10.35239 -10.24438 -9.59561 -9.07563 -5.20817 -0.92793 0.21557 0.29014 0.33825 0.71126 0.97573 1.17096 1.43065 1.52997 1.59739 1.77317 1.84731 1.98619 2.75856 2.82241 3.03561 3.20853 3.29837 3.36492 3.50880 3.53791 3.59043 3.66082 3.72439 3.76197 4.02923 4.11936 4.12554 4.22097 4.23943 4.29847 4.33954 4.36111 4.39420 4.44469 4.47593 4.52193 4.55321 4.56119 4.64912 4.77803 4.79191 4.83833 4.93528 4.96140 5.04612 5.13107 5.18736 5.22902 5.24974 5.30980 5.41446 5.67128 6.15195 6.27134 6.41283 6.62179 7.05969 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.349 6.349 3 C 0.478 3.522 4 O -0.493 6.493 5 C 0.154 3.846 6 N -0.706 5.706 7 C 0.565 3.435 8 O -0.522 6.522 9 C -0.135 4.135 10 C -0.075 4.075 11 C -0.110 4.110 12 C 0.015 3.985 13 C -0.148 4.148 14 C -0.119 4.119 15 C -0.104 4.104 16 C -0.219 4.219 17 C -0.026 4.026 18 O -0.534 6.534 19 Si 0.651 3.349 20 S 0.133 5.867 21 C -0.120 4.120 22 C -0.047 4.047 23 C -0.140 4.140 24 C 0.064 3.936 25 H 0.104 0.896 26 O -0.371 6.371 27 C 0.027 3.973 28 C -0.103 4.103 29 H 0.065 0.935 30 H 0.104 0.896 31 H 0.065 0.935 32 H 0.408 0.592 33 H 0.131 0.869 34 H 0.135 0.865 35 H 0.145 0.855 36 H 0.146 0.854 37 H 0.124 0.876 38 H 0.381 0.619 39 H -0.232 1.232 40 H -0.237 1.237 41 H 0.131 0.869 42 H 0.142 0.858 43 H 0.118 0.882 44 H 0.086 0.914 45 H 0.043 0.957 46 H 0.089 0.911 47 H 0.046 0.954 48 H 0.094 0.906 49 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.117 -1.802 3.434 4.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.318 3.682 4 O -0.378 6.378 5 C 0.065 3.935 6 N -0.361 5.361 7 C 0.354 3.646 8 O -0.398 6.398 9 C -0.138 4.138 10 C -0.094 4.094 11 C -0.130 4.130 12 C 0.013 3.987 13 C -0.265 4.265 14 C -0.149 4.149 15 C -0.134 4.134 16 C -0.336 4.336 17 C -0.139 4.139 18 O -0.340 6.340 19 Si 0.551 3.449 20 S 0.400 5.600 21 C -0.139 4.139 22 C -0.066 4.066 23 C -0.178 4.178 24 C 0.005 3.995 25 H 0.122 0.878 26 O -0.289 6.289 27 C -0.069 4.069 28 C -0.141 4.141 29 H 0.084 0.916 30 H 0.123 0.877 31 H 0.084 0.916 32 H 0.245 0.755 33 H 0.149 0.851 34 H 0.152 0.848 35 H 0.163 0.837 36 H 0.163 0.837 37 H 0.141 0.859 38 H 0.229 0.771 39 H -0.155 1.155 40 H -0.161 1.161 41 H 0.149 0.851 42 H 0.160 0.840 43 H 0.136 0.864 44 H 0.105 0.895 45 H 0.062 0.938 46 H 0.108 0.892 47 H 0.064 0.936 48 H 0.113 0.887 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 0.586 -0.941 0.826 1.383 hybrid contribution -0.087 -1.397 2.325 2.714 sum 0.499 -2.338 3.151 3.955 Atomic orbital electron populations 1.23361 0.75659 1.04128 1.02840 1.86504 1.23821 1.32681 1.83468 1.23237 0.90681 0.81894 0.72356 1.90694 1.66058 1.36352 1.44732 1.21077 0.85577 0.87991 0.98858 1.45615 1.58703 1.24411 1.07351 1.18266 0.78131 0.86546 0.81692 1.90835 1.45731 1.44179 1.59065 1.19899 1.04429 0.94883 0.94595 1.20966 0.96045 0.92873 0.99526 1.20870 1.00489 0.97874 0.93718 1.18302 0.96181 0.90996 0.93266 1.23078 1.08245 0.98499 0.96688 1.20396 1.00451 0.92696 1.01389 1.20003 1.01113 1.00170 0.92085 1.25092 1.09371 1.00050 0.99137 1.24406 0.85701 0.98846 1.04992 1.86525 1.14485 1.38308 1.94641 0.94994 0.84244 0.88850 0.76847 1.84163 1.59217 1.11632 1.05003 1.20970 0.99618 0.93436 0.99880 1.20937 0.94995 0.96834 0.93823 1.23909 1.03210 0.97071 0.93646 1.23657 0.91246 0.89313 0.95314 0.87779 1.87942 1.33829 1.46779 1.60327 1.22865 1.02090 0.90805 0.91149 1.23397 1.03412 0.90491 0.96788 0.91593 0.87737 0.91606 0.75469 0.85112 0.84755 0.83724 0.83652 0.85901 0.77104 1.15526 1.16133 0.85122 0.84039 0.86352 0.89500 0.93806 0.89250 0.93581 0.88695 0.87108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.78 10.28 -39.27 -0.40 -1.19 16 3 C 0.48 1.48 6.99 36.01 0.25 1.73 16 4 O -0.49 -2.57 14.98 -18.75 -0.28 -2.85 16 5 C 0.15 0.14 1.16 -132.02 -0.15 -0.01 16 6 N -0.71 0.25 4.93 -48.82 -0.24 0.01 16 7 C 0.57 1.20 7.48 -12.46 -0.09 1.11 16 8 O -0.52 -2.95 15.25 5.28 0.08 -2.86 16 9 C -0.13 -0.09 5.88 -104.90 -0.62 -0.70 16 10 C -0.08 0.12 9.48 -39.59 -0.38 -0.25 16 11 C -0.11 0.15 9.48 -39.59 -0.38 -0.22 16 12 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 13 C -0.15 -0.01 6.37 -36.94 -0.24 -0.24 16 14 C -0.12 0.08 9.64 -40.90 -0.39 -0.32 16 15 C -0.10 0.03 10.00 -41.32 -0.41 -0.38 16 16 C -0.22 0.07 5.73 -35.89 -0.21 -0.13 16 17 C -0.03 0.02 2.96 36.00 0.11 0.13 16 18 O -0.53 0.22 12.86 -35.23 -0.45 -0.23 16 19 Si 0.65 -0.73 30.96 -169.99 -5.26 -5.99 16 20 S 0.13 -0.05 19.46 -107.50 -2.09 -2.14 16 21 C -0.12 -0.02 9.54 -39.59 -0.38 -0.40 16 22 C -0.05 -0.04 9.53 -39.59 -0.38 -0.42 16 23 C -0.14 0.17 7.27 -25.77 -0.19 -0.02 16 24 C 0.06 0.06 3.88 -25.92 -0.10 -0.05 16 25 H 0.10 0.13 7.05 -51.93 -0.37 -0.24 16 26 O -0.37 -0.62 10.71 -35.23 -0.38 -1.00 16 27 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 28 C -0.10 -0.20 5.60 -25.92 -0.15 -0.35 16 29 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 30 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 32 H 0.41 -1.41 6.79 -40.82 -0.28 -1.69 16 33 H 0.13 -0.60 6.39 -52.49 -0.34 -0.94 16 34 H 0.13 -0.46 6.74 -52.49 -0.35 -0.82 16 35 H 0.15 -0.38 6.88 -52.48 -0.36 -0.74 16 36 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 37 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 38 H 0.38 -1.56 8.70 45.56 0.40 -1.17 16 39 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 40 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 41 H 0.13 -0.13 7.26 -52.49 -0.38 -0.51 16 42 H 0.14 0.15 7.64 -52.49 -0.40 -0.25 16 43 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 44 H 0.09 -0.19 8.10 -51.93 -0.42 -0.61 16 45 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 46 H 0.09 -0.15 8.14 -51.92 -0.42 -0.57 16 47 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 48 H 0.09 0.36 7.85 -51.93 -0.41 -0.04 16 49 H 0.11 0.22 8.14 -51.93 -0.42 -0.21 16 LS Contribution 426.46 15.07 6.43 6.43 Total: 0.00 -9.59 426.46 -11.07 -20.66 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -6.32 Total: -11.82 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -2.14 Total: 1.00 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.24 Total: 0.01 kcal Atomic # 8 Polarization: -6.70 SS G_CDS: -1.43 Total: -8.14 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.26 Total: -5.99 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.09 Total: -2.14 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -9.59 -11.07 -20.66 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.856 kcal (2) G-P(sol) polarization free energy of solvation -9.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.444 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds