Wall clock time and date at job start Sun Mar 7 2021 00:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34232 * 116.99962 * 2 1 4 4 O 1.20821 * 119.99883 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99612 * 179.97438 * 3 2 1 6 6 N 1.46494 * 112.85494 * 324.06829 * 5 3 2 7 7 C 1.34779 * 119.99871 * 293.64493 * 6 5 3 8 8 O 1.21582 * 119.99987 * 354.96789 * 7 6 5 9 9 C 1.47536 * 120.00090 * 174.96507 * 7 6 5 10 10 C 1.40139 * 120.19297 * 179.72305 * 9 7 6 11 11 O 1.35646 * 120.14898 * 359.97438 * 10 9 7 12 12 C 1.38715 * 119.69599 * 179.69676 * 10 9 7 13 13 C 1.38049 * 120.08554 * 0.58254 * 12 10 9 14 14 C 1.50701 * 119.80168 * 179.73815 * 13 12 10 15 15 O 1.42901 * 109.47200 * 299.97669 * 14 13 12 16 16 Si 1.86306 * 109.46765 * 179.97438 * 14 13 12 17 17 C 1.38549 * 120.39069 * 359.71955 * 13 12 10 18 18 C 1.37782 * 120.30068 * 359.97149 * 17 13 12 19 19 C 1.53784 * 113.61198 * 192.87193 * 5 3 2 20 20 C 1.53780 * 87.08164 * 270.80029 * 19 5 3 21 21 H 1.09007 * 113.61735 * 89.11409 * 20 19 5 22 22 O 1.42899 * 113.61486 * 220.01972 * 20 19 5 23 23 C 1.42907 * 113.99996 * 210.00050 * 22 20 19 24 24 C 1.53785 * 113.69065 * 95.33724 * 5 3 2 25 25 H 1.09007 * 109.47400 * 300.00020 * 1 2 3 26 26 H 1.08999 * 109.47204 * 59.99722 * 1 2 3 27 27 H 1.08999 * 109.47493 * 180.02562 * 1 2 3 28 28 H 0.97003 * 120.00161 * 113.64352 * 6 5 3 29 29 H 0.96704 * 113.99918 * 89.99897 * 11 10 9 30 30 H 1.08002 * 119.95123 * 180.29885 * 12 10 9 31 31 H 1.08994 * 109.47421 * 59.98141 * 14 13 12 32 32 H 0.96698 * 113.99905 * 300.00350 * 15 14 13 33 33 H 1.48499 * 110.00119 * 58.68029 * 16 14 13 34 34 H 1.48506 * 109.99570 * 180.02562 * 16 14 13 35 35 H 1.08002 * 119.84842 * 180.02562 * 17 13 12 36 36 H 1.08003 * 120.04755 * 180.02562 * 18 17 13 37 37 H 1.08991 * 113.61492 * 25.34991 * 19 5 3 38 38 H 1.09002 * 113.61573 * 156.17161 * 19 5 3 39 39 H 1.09003 * 109.46598 * 299.99985 * 23 22 20 40 40 H 1.08996 * 109.47214 * 59.99815 * 23 22 20 41 41 H 1.08997 * 109.47070 * 179.97438 * 23 22 20 42 42 H 1.08997 * 113.61350 * 203.66948 * 24 5 3 43 43 H 1.09000 * 113.61178 * 334.58110 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1913 0.2131 0.7932 7 6 4.0225 0.1820 2.1300 8 8 3.4291 1.0840 2.6890 9 6 4.5577 -0.9467 2.9151 10 6 4.3896 -0.9803 4.3059 11 8 3.7341 0.0255 4.9374 12 6 4.8915 -2.0496 5.0332 13 6 5.5638 -3.0693 4.3898 14 6 6.1116 -4.2250 5.1869 15 8 7.0532 -3.7387 6.1455 16 14 6.9568 -5.4253 4.0397 17 6 5.7376 -3.0366 3.0156 18 6 5.2402 -1.9854 2.2768 19 6 4.1094 2.6789 0.3144 20 6 4.0444 2.9560 -1.1968 21 1 3.0866 3.3590 -1.5261 22 8 5.1601 3.6998 -1.6909 23 6 4.8559 4.5245 -2.8176 24 6 4.1770 1.4376 -1.4014 25 1 -0.3634 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 4.7266 -0.4675 0.3560 29 1 2.7808 -0.1158 5.0178 30 1 4.7600 -2.0821 6.1047 31 1 5.2951 -4.7297 5.7032 32 1 7.8084 -3.2774 5.7559 33 1 8.0518 -4.7413 3.3060 34 1 7.5008 -6.5701 4.8136 35 1 6.2647 -3.8393 2.5212 36 1 5.3776 -1.9643 1.2058 37 1 3.4242 3.2912 0.9005 38 1 5.1229 2.6753 0.7158 39 1 4.4961 3.9019 -3.6368 40 1 4.0853 5.2448 -2.5431 41 1 5.7541 5.0559 -3.1320 42 1 5.2094 1.0949 -1.4703 43 1 3.5462 1.0480 -2.2003 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:41 Heat of formation + Delta-G solvation = -160.202546 kcal Electronic energy + Delta-G solvation = -30238.571854 eV Core-core repulsion = 25832.015230 eV Total energy + Delta-G solvation = -4406.556624 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.134 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.55324 -41.43888 -40.25777 -39.52969 -38.47365 -37.69087 -37.26036 -36.99738 -34.48503 -32.60985 -31.15617 -29.34481 -28.06373 -27.55037 -27.10142 -25.89669 -23.99548 -23.77660 -22.91750 -21.61759 -20.72617 -19.71251 -18.98149 -18.77715 -18.30415 -18.00949 -17.58543 -17.27120 -17.12606 -16.74527 -16.43770 -16.35890 -16.19240 -16.00499 -15.73430 -15.38072 -15.12241 -14.95114 -14.88583 -14.44257 -14.30077 -13.77147 -13.75469 -13.53760 -13.40221 -13.29386 -13.05135 -12.92310 -12.59571 -12.43035 -12.26020 -12.14480 -11.99317 -11.82320 -11.70770 -11.64315 -10.91798 -10.70036 -10.60531 -10.36506 -10.12403 -9.84780 -5.07339 -0.46342 0.06819 0.97163 1.13633 1.45933 1.49110 1.72463 1.82217 1.87155 2.51158 2.76991 3.02817 3.06423 3.20166 3.24136 3.37572 3.49237 3.53381 3.60530 3.71407 3.92645 4.00673 4.11893 4.16444 4.21067 4.32742 4.33710 4.34415 4.42621 4.50663 4.52441 4.55035 4.63604 4.65265 4.76355 4.78360 4.91810 4.97670 5.06362 5.15385 5.15639 5.30769 5.48689 6.12980 6.26760 6.27357 6.63834 6.67225 7.08428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.480 3.520 4 O -0.489 6.489 5 C 0.158 3.842 6 N -0.708 5.708 7 C 0.563 3.437 8 O -0.506 6.506 9 C -0.163 4.163 10 C 0.175 3.825 11 O -0.476 6.476 12 C -0.129 4.129 13 C -0.073 4.073 14 C -0.081 4.081 15 O -0.526 6.526 16 Si 0.688 3.312 17 C -0.135 4.135 18 C -0.062 4.062 19 C -0.111 4.111 20 C 0.065 3.935 21 H 0.101 0.899 22 O -0.370 6.370 23 C 0.027 3.973 24 C -0.142 4.142 25 H 0.065 0.935 26 H 0.065 0.935 27 H 0.104 0.896 28 H 0.407 0.593 29 H 0.398 0.602 30 H 0.141 0.859 31 H 0.123 0.877 32 H 0.378 0.622 33 H -0.258 1.258 34 H -0.255 1.255 35 H 0.137 0.863 36 H 0.135 0.865 37 H 0.096 0.904 38 H 0.110 0.890 39 H 0.044 0.956 40 H 0.046 0.954 41 H 0.089 0.911 42 H 0.118 0.882 43 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.533 -5.489 -5.532 7.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.320 3.680 4 O -0.374 6.374 5 C 0.069 3.931 6 N -0.364 5.364 7 C 0.351 3.649 8 O -0.380 6.380 9 C -0.167 4.167 10 C 0.128 3.872 11 O -0.287 6.287 12 C -0.148 4.148 13 C -0.074 4.074 14 C -0.191 4.191 15 O -0.333 6.333 16 Si 0.589 3.411 17 C -0.153 4.153 18 C -0.081 4.081 19 C -0.149 4.149 20 C 0.006 3.994 21 H 0.119 0.881 22 O -0.288 6.288 23 C -0.069 4.069 24 C -0.180 4.180 25 H 0.084 0.916 26 H 0.084 0.916 27 H 0.123 0.877 28 H 0.245 0.755 29 H 0.257 0.743 30 H 0.159 0.841 31 H 0.141 0.859 32 H 0.226 0.774 33 H -0.182 1.182 34 H -0.180 1.180 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.115 0.885 38 H 0.128 0.872 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.108 0.892 42 H 0.136 0.864 43 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -0.186 -4.952 -4.790 6.892 hybrid contribution -0.048 0.364 0.091 0.378 sum -0.234 -4.588 -4.699 6.572 Atomic orbital electron populations 1.23357 0.75680 1.04091 1.02855 1.86496 1.23809 1.32722 1.83617 1.23125 0.90579 0.81875 0.72456 1.90696 1.66051 1.36359 1.44313 1.20968 0.85824 0.90940 0.95374 1.45660 1.53730 1.30352 1.06618 1.18121 0.79607 0.85753 0.81469 1.90871 1.40516 1.36682 1.69941 1.20318 1.05640 0.96993 0.93708 1.18505 0.93724 0.86693 0.88278 1.84769 1.24927 1.41250 1.77765 1.21351 0.99660 0.92483 1.01291 1.20410 0.96631 0.96416 0.93933 1.25162 0.96751 0.98945 0.98193 1.86629 1.36326 1.76444 1.33869 0.95012 0.85066 0.79495 0.81535 1.20945 1.02013 0.99024 0.93288 1.21150 0.94816 0.92200 0.99945 1.23483 1.03397 0.91762 0.96237 1.23593 0.91002 0.90068 0.94766 0.88075 1.87949 1.33399 1.59669 1.47787 1.22873 1.02163 0.93913 0.87984 1.23863 1.03184 0.98121 0.92792 0.91633 0.91620 0.87716 0.75543 0.74341 0.84117 0.85892 0.77410 1.18226 1.18012 0.84570 0.84707 0.88524 0.87193 0.93778 0.93575 0.89234 0.86376 0.89400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.64 10.42 -39.26 -0.41 -1.05 16 3 C 0.48 1.45 6.44 36.00 0.23 1.68 16 4 O -0.49 -2.65 15.12 -18.75 -0.28 -2.94 16 5 C 0.16 0.13 1.11 -132.16 -0.15 -0.01 16 6 N -0.71 0.28 5.07 -48.96 -0.25 0.03 16 7 C 0.56 1.31 7.41 -12.47 -0.09 1.21 16 8 O -0.51 -3.01 14.20 -16.58 -0.24 -3.25 16 9 C -0.16 -0.12 5.89 -104.84 -0.62 -0.74 16 10 C 0.17 0.27 6.72 -38.69 -0.26 0.01 16 11 O -0.48 -1.27 11.58 -40.51 -0.47 -1.74 16 12 C -0.13 -0.03 9.53 -39.47 -0.38 -0.41 16 13 C -0.07 0.09 5.39 -104.58 -0.56 -0.48 16 14 C -0.08 0.13 2.81 36.01 0.10 0.23 16 15 O -0.53 -0.15 12.76 -35.23 -0.45 -0.60 16 16 Si 0.69 -1.71 29.77 -169.99 -5.06 -6.77 16 17 C -0.14 0.32 8.64 -39.63 -0.34 -0.02 16 18 C -0.06 0.13 9.53 -39.20 -0.37 -0.24 16 19 C -0.11 -0.23 6.15 -25.92 -0.16 -0.39 16 20 C 0.06 0.05 3.92 -25.92 -0.10 -0.05 16 21 H 0.10 0.09 7.36 -51.93 -0.38 -0.29 16 22 O -0.37 -0.59 10.71 -35.23 -0.38 -0.97 16 23 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 24 C -0.14 0.20 7.21 -25.91 -0.19 0.01 16 25 H 0.06 0.03 8.13 -51.93 -0.42 -0.39 16 26 H 0.07 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 28 H 0.41 -1.49 6.75 -40.82 -0.28 -1.76 16 29 H 0.40 -0.37 9.06 45.56 0.41 0.04 16 30 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 31 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 32 H 0.38 -0.92 8.70 45.56 0.40 -0.52 16 33 H -0.26 0.18 7.11 56.52 0.40 0.58 16 34 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 35 H 0.14 -0.61 4.85 -52.49 -0.25 -0.87 16 36 H 0.14 -0.71 6.42 -52.48 -0.34 -1.04 16 37 H 0.10 0.40 7.63 -51.93 -0.40 0.00 16 38 H 0.11 0.22 8.14 -51.93 -0.42 -0.20 16 39 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.12 -0.34 8.14 -51.93 -0.42 -0.76 16 43 H 0.09 -0.22 8.10 -51.93 -0.42 -0.64 16 LS Contribution 366.02 15.07 5.52 5.52 Total: 0.00 -11.03 366.02 -7.41 -18.44 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -4.67 Total: -9.62 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -0.72 Total: 2.94 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.25 Total: 0.03 kcal Atomic # 8 Polarization: -8.32 SS G_CDS: -2.22 Total: -10.55 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.06 Total: -6.77 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -11.03 -7.41 -18.44 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.759 kcal (2) G-P(sol) polarization free energy of solvation -11.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.203 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds