Wall clock time and date at job start Sun Mar 7 2021 00:15:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34234 * 117.00086 * 2 1 4 4 O 1.20825 * 119.99853 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00024 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.85031 * 25.33501 * 5 3 2 7 7 C 1.34777 * 119.99828 * 309.38649 * 6 5 3 8 8 O 1.21593 * 119.99949 * 0.28071 * 7 6 5 9 9 C 1.47533 * 119.99975 * 180.27938 * 7 6 5 10 10 C 1.40143 * 120.18891 * 179.72747 * 9 7 6 11 11 O 1.35654 * 120.15124 * 359.97438 * 10 9 7 12 12 C 1.38716 * 119.69328 * 179.76823 * 10 9 7 13 13 C 1.50704 * 119.95143 * 180.22546 * 12 10 9 14 14 O 1.42903 * 109.46910 * 75.28160 * 13 12 10 15 15 Si 1.86309 * 109.46847 * 195.27635 * 13 12 10 16 16 C 1.38045 * 120.08686 * 0.50605 * 12 10 9 17 17 C 1.38550 * 120.39263 * 359.74520 * 16 12 10 18 18 C 1.50701 * 119.84969 * 180.02562 * 17 16 12 19 19 C 1.37793 * 120.29778 * 359.97438 * 17 16 12 20 20 C 1.53784 * 113.61225 * 254.13490 * 5 3 2 21 21 C 1.54052 * 86.98274 * 219.98193 * 20 5 3 22 22 H 1.09001 * 113.69530 * 139.99579 * 21 20 5 23 23 O 1.42909 * 113.61311 * 270.88406 * 21 20 5 24 24 C 1.42899 * 113.99989 * 247.49229 * 23 21 20 25 25 C 1.53776 * 113.61169 * 156.52813 * 5 3 2 26 26 H 1.09004 * 109.46627 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.47096 * 300.00044 * 1 2 3 28 28 H 1.08999 * 109.46610 * 60.00154 * 1 2 3 29 29 H 0.97001 * 120.00384 * 129.67096 * 6 5 3 30 30 H 0.96704 * 113.98986 * 90.01030 * 11 10 9 31 31 H 1.08994 * 109.47458 * 315.27680 * 13 12 10 32 32 H 0.96700 * 114.00412 * 59.99825 * 14 13 12 33 33 H 1.48501 * 109.99837 * 180.02562 * 15 13 12 34 34 H 1.48497 * 109.99883 * 301.32438 * 15 13 12 35 35 H 1.08005 * 119.80319 * 179.76823 * 16 12 10 36 36 H 1.09001 * 109.46931 * 269.97166 * 18 17 16 37 37 H 1.09002 * 109.47418 * 29.97753 * 18 17 16 38 38 H 1.09005 * 109.46591 * 149.97591 * 18 17 16 39 39 H 1.08000 * 120.03989 * 179.97438 * 19 17 16 40 40 H 1.08994 * 113.61573 * 334.48433 * 20 5 3 41 41 H 1.09000 * 113.61330 * 105.39100 * 20 5 3 42 42 H 1.09000 * 109.47262 * 300.00264 * 24 23 21 43 43 H 1.09004 * 109.46859 * 60.00156 * 24 23 21 44 44 H 1.09000 * 109.47207 * 180.02562 * 24 23 21 45 45 H 1.08999 * 113.61811 * 254.61272 * 25 5 3 46 46 H 1.09005 * 113.61604 * 25.51728 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1986 0.0860 -0.5766 7 6 3.8413 -1.1415 -0.1499 8 8 2.9906 -1.2623 0.7104 9 6 4.4823 -2.3385 -0.7268 10 6 4.1179 -3.6166 -0.2820 11 8 3.1740 -3.7592 0.6818 12 6 4.7238 -4.7352 -0.8349 13 6 4.3327 -6.1125 -0.3646 14 8 3.0590 -6.4589 -0.9120 15 14 5.6082 -7.3472 -0.9300 16 6 5.6886 -4.5882 -1.8113 17 6 6.0554 -3.3262 -2.2499 18 6 7.1096 -3.1800 -3.3168 19 6 5.4598 -2.2043 -1.7158 20 6 4.1608 1.6921 1.3561 21 6 5.1654 2.5471 0.5605 22 1 5.3689 3.5178 1.0125 23 8 6.3552 1.8433 0.1982 24 6 7.5329 2.3158 0.8555 25 6 4.1141 2.5976 -0.5607 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 -0.3632 0.5138 -0.8900 29 1 4.8772 0.1824 -1.2629 30 1 2.2726 -3.8375 0.3407 31 1 4.2753 -6.1221 0.7238 32 1 3.0362 -6.4704 -1.8787 33 1 5.2338 -8.7097 -0.4731 34 1 5.7189 -7.3211 -2.4106 35 1 6.1601 -5.4622 -2.2359 36 1 8.0914 -3.1038 -2.8494 37 1 7.0860 -4.0502 -3.9728 38 1 6.9140 -2.2800 -3.8999 39 1 5.7492 -1.2226 -2.0606 40 1 3.4780 2.2791 1.9702 41 1 4.6220 0.8693 1.9024 42 1 7.6915 3.3652 0.6069 43 1 7.4135 2.2119 1.9340 44 1 8.3919 1.7310 0.5267 45 1 4.5376 2.5056 -1.5608 46 1 3.4184 3.4319 -0.4696 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:44 Heat of formation + Delta-G solvation = -157.985004 kcal Electronic energy + Delta-G solvation = -33400.789595 eV Core-core repulsion = 28838.791512 eV Total energy + Delta-G solvation = -4561.998083 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.39112 -41.38793 -40.24746 -39.39604 -37.95546 -37.70239 -37.50898 -36.69559 -34.24139 -33.08115 -32.45828 -29.14051 -27.86472 -27.64322 -27.15762 -26.77080 -26.46719 -24.82155 -22.61098 -22.07430 -21.48704 -20.34497 -19.52301 -18.97181 -18.49750 -18.04191 -17.61709 -17.40739 -17.27086 -17.09161 -16.73101 -16.62823 -16.16668 -15.97291 -15.67976 -15.62124 -15.30145 -14.85784 -14.79921 -14.75138 -14.59204 -14.23112 -14.19006 -13.66067 -13.60507 -13.59103 -13.33823 -13.21444 -13.06082 -12.84983 -12.59537 -12.57254 -12.19838 -12.17061 -12.03722 -11.74332 -11.63734 -11.51410 -11.32127 -10.75452 -10.68494 -10.41749 -10.12693 -10.01549 -9.48026 -5.00031 -0.26770 0.09480 1.18869 1.23932 1.51303 1.83178 1.89336 1.92650 1.99188 2.48387 2.65675 3.07476 3.26108 3.31183 3.36917 3.45680 3.49432 3.66374 3.68935 3.82834 4.07166 4.10454 4.15251 4.26978 4.32902 4.34910 4.35982 4.43316 4.46820 4.50588 4.54176 4.58268 4.59664 4.61338 4.70620 4.72651 4.77528 4.78289 4.83801 4.96688 4.99013 5.21587 5.35018 5.36078 5.57491 5.61672 6.04526 6.36554 6.50592 6.82896 6.89118 7.35446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.312 6.312 3 C 0.469 3.531 4 O -0.510 6.510 5 C 0.164 3.836 6 N -0.701 5.701 7 C 0.556 3.444 8 O -0.476 6.476 9 C -0.157 4.157 10 C 0.192 3.808 11 O -0.471 6.471 12 C -0.151 4.151 13 C -0.070 4.070 14 O -0.527 6.527 15 Si 0.692 3.308 16 C -0.083 4.083 17 C -0.097 4.097 18 C -0.116 4.116 19 C -0.066 4.066 20 C -0.148 4.148 21 C 0.068 3.932 22 H 0.091 0.909 23 O -0.367 6.367 24 C 0.031 3.969 25 C -0.123 4.123 26 H 0.099 0.901 27 H 0.061 0.939 28 H 0.057 0.943 29 H 0.408 0.592 30 H 0.398 0.602 31 H 0.123 0.877 32 H 0.374 0.626 33 H -0.255 1.255 34 H -0.259 1.259 35 H 0.135 0.865 36 H 0.077 0.923 37 H 0.069 0.931 38 H 0.070 0.930 39 H 0.131 0.869 40 H 0.106 0.894 41 H 0.093 0.907 42 H 0.045 0.955 43 H 0.044 0.956 44 H 0.090 0.910 45 H 0.094 0.906 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.184 1.276 -3.408 7.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.226 6.226 3 C 0.310 3.690 4 O -0.398 6.398 5 C 0.074 3.926 6 N -0.357 5.357 7 C 0.343 3.657 8 O -0.349 6.349 9 C -0.161 4.161 10 C 0.145 3.855 11 O -0.282 6.282 12 C -0.152 4.152 13 C -0.179 4.179 14 O -0.333 6.333 15 Si 0.593 3.407 16 C -0.101 4.101 17 C -0.097 4.097 18 C -0.173 4.173 19 C -0.085 4.085 20 C -0.187 4.187 21 C 0.010 3.990 22 H 0.109 0.891 23 O -0.285 6.285 24 C -0.066 4.066 25 C -0.161 4.161 26 H 0.117 0.883 27 H 0.080 0.920 28 H 0.076 0.924 29 H 0.246 0.754 30 H 0.257 0.743 31 H 0.141 0.859 32 H 0.221 0.779 33 H -0.180 1.180 34 H -0.184 1.184 35 H 0.152 0.848 36 H 0.095 0.905 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.149 0.851 40 H 0.125 0.875 41 H 0.112 0.888 42 H 0.064 0.936 43 H 0.063 0.937 44 H 0.108 0.892 45 H 0.113 0.887 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 5.769 0.563 -2.357 6.258 hybrid contribution -1.183 0.520 -1.155 1.733 sum 4.586 1.083 -3.511 5.877 Atomic orbital electron populations 1.23289 0.77727 1.03582 1.02023 1.87024 1.22133 1.31224 1.82248 1.23641 0.91030 0.82189 0.72105 1.90676 1.66281 1.36694 1.46154 1.20993 0.85410 0.87742 0.98419 1.45441 1.43407 1.03649 1.43180 1.17983 0.82460 0.82419 0.82861 1.90879 1.29317 1.85554 1.29133 1.20322 1.01834 0.93409 1.00487 1.18191 0.91127 0.89460 0.86760 1.84685 1.18511 1.94781 1.30239 1.20595 1.00010 0.95979 0.98587 1.24961 0.92923 0.96383 1.03662 1.86637 1.30216 1.90990 1.25459 0.94832 0.85941 0.78538 0.81391 1.21154 0.95680 0.97768 0.95518 1.19778 0.98773 0.92321 0.98871 1.20830 0.96977 1.03179 0.96312 1.21155 0.94129 0.98876 0.94304 1.23939 0.98360 1.01341 0.95054 1.23032 0.85229 0.95278 0.95505 0.89134 1.87841 1.15047 1.58812 1.66820 1.22865 0.87171 0.99508 0.97031 1.23605 0.97250 0.94959 1.00279 0.88286 0.92044 0.92407 0.75450 0.74316 0.85910 0.77922 1.17986 1.18404 0.84757 0.90455 0.91207 0.91112 0.85104 0.87526 0.88818 0.93595 0.93687 0.89196 0.88744 0.85609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.31 -1.44 6.32 -47.61 -0.30 -1.74 16 3 C 0.47 1.98 7.07 36.01 0.25 2.23 16 4 O -0.51 -2.99 15.79 -18.75 -0.30 -3.29 16 5 C 0.16 0.23 1.10 -132.16 -0.15 0.09 16 6 N -0.70 -0.54 4.71 -48.96 -0.23 -0.77 16 7 C 0.56 1.65 7.12 -12.47 -0.09 1.56 16 8 O -0.48 -2.75 11.70 -26.90 -0.31 -3.07 16 9 C -0.16 -0.26 5.89 -104.85 -0.62 -0.88 16 10 C 0.19 0.42 6.69 -38.69 -0.26 0.16 16 11 O -0.47 -1.55 10.90 -40.54 -0.44 -2.00 16 12 C -0.15 -0.07 5.27 -104.51 -0.55 -0.62 16 13 C -0.07 -0.01 2.38 36.01 0.09 0.07 16 14 O -0.53 -0.52 12.88 -35.23 -0.45 -0.97 16 15 Si 0.69 -0.78 30.24 -169.99 -5.14 -5.92 16 16 C -0.08 0.07 8.30 -39.54 -0.33 -0.26 16 17 C -0.10 0.12 5.87 -104.67 -0.61 -0.49 16 18 C -0.12 0.38 10.00 36.01 0.36 0.74 16 19 C -0.07 0.05 9.18 -39.20 -0.36 -0.31 16 20 C -0.15 -0.10 7.26 -25.77 -0.19 -0.29 16 21 C 0.07 -0.08 4.38 -25.78 -0.11 -0.19 16 22 H 0.09 -0.24 7.87 -51.93 -0.41 -0.65 16 23 O -0.37 0.27 10.00 -35.23 -0.35 -0.08 16 24 C 0.03 -0.08 10.85 101.05 1.10 1.02 16 25 C -0.12 0.12 7.06 -25.92 -0.18 -0.07 16 26 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.06 0.15 8.13 -51.93 -0.42 -0.27 16 28 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 29 H 0.41 -0.54 6.50 -40.82 -0.27 -0.81 16 30 H 0.40 0.38 9.06 45.56 0.41 0.80 16 31 H 0.12 0.10 7.82 -51.93 -0.41 -0.31 16 32 H 0.37 -0.77 8.70 45.56 0.40 -0.38 16 33 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 34 H -0.26 0.02 6.68 56.52 0.38 0.40 16 35 H 0.14 -0.31 4.83 -52.48 -0.25 -0.57 16 36 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 38 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 39 H 0.13 -0.38 6.40 -52.49 -0.34 -0.72 16 40 H 0.11 0.04 8.09 -51.93 -0.42 -0.38 16 41 H 0.09 0.19 8.14 -51.93 -0.42 -0.23 16 42 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 45 H 0.09 -0.20 8.11 -51.93 -0.42 -0.62 16 46 H 0.13 -0.10 7.38 -51.93 -0.38 -0.49 16 LS Contribution 381.36 15.07 5.75 5.75 Total: 0.00 -9.33 381.36 -7.90 -17.23 By element: Atomic # 1 Polarization: -3.50 SS G_CDS: -5.53 Total: -9.03 kcal Atomic # 6 Polarization: 4.47 SS G_CDS: -0.58 Total: 3.89 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.23 Total: -0.77 kcal Atomic # 8 Polarization: -8.99 SS G_CDS: -2.16 Total: -11.15 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.14 Total: -5.92 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.33 -7.90 -17.23 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.757 kcal (2) G-P(sol) polarization free energy of solvation -9.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.228 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds