Wall clock time and date at job start Sun Mar 7 2021 00:15:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34225 * 116.99970 * 2 1 4 4 O 1.20827 * 120.00087 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00227 * 180.02562 * 3 2 1 6 6 N 1.46497 * 112.84403 * 324.06906 * 5 3 2 7 7 C 1.34776 * 120.00164 * 293.63768 * 6 5 3 8 8 O 1.21593 * 119.99835 * 354.97476 * 7 6 5 9 9 C 1.47522 * 120.00454 * 174.97140 * 7 6 5 10 10 C 1.39773 * 120.07047 * 180.02562 * 9 7 6 11 11 C 1.37636 * 119.92877 * 180.02562 * 10 9 7 12 12 C 1.50694 * 119.96239 * 179.97438 * 11 10 9 13 13 O 1.42906 * 109.47361 * 255.02338 * 12 11 10 14 14 Si 1.86296 * 109.47490 * 15.02836 * 12 11 10 15 15 C 1.39191 * 120.06687 * 0.02737 * 11 10 9 16 16 N 1.39048 * 119.92764 * 179.97438 * 15 11 10 17 17 C 1.46902 * 110.99984 * 239.99730 * 16 15 11 18 18 C 1.46899 * 111.00193 * 116.04388 * 16 15 11 19 19 C 1.39249 * 120.14459 * 0.24550 * 15 11 10 20 20 C 1.37581 * 120.06152 * 359.45216 * 19 15 11 21 21 C 1.53777 * 113.61685 * 192.87110 * 5 3 2 22 22 C 1.53775 * 87.08215 * 270.80057 * 21 5 3 23 23 H 1.08998 * 113.61706 * 89.11502 * 22 21 5 24 24 O 1.42901 * 113.61467 * 219.93756 * 22 21 5 25 25 C 1.42894 * 114.00032 * 209.99524 * 24 22 21 26 26 C 1.53782 * 113.69070 * 95.33130 * 5 3 2 27 27 H 1.09008 * 109.46620 * 299.99945 * 1 2 3 28 28 H 1.09001 * 109.47149 * 59.99819 * 1 2 3 29 29 H 1.08995 * 109.47186 * 180.02562 * 1 2 3 30 30 H 0.97003 * 120.00188 * 113.64348 * 6 5 3 31 31 H 1.07995 * 120.03741 * 0.02562 * 10 9 7 32 32 H 1.09003 * 109.47238 * 135.02396 * 12 11 10 33 33 H 0.96698 * 113.99544 * 300.00559 * 13 12 11 34 34 H 1.48501 * 110.00173 * 59.99168 * 14 12 11 35 35 H 1.48497 * 110.00367 * 181.31993 * 14 12 11 36 36 H 1.09000 * 109.47018 * 59.99837 * 17 16 15 37 37 H 1.09002 * 109.47062 * 299.99802 * 17 16 15 38 38 H 1.08994 * 109.46949 * 180.02562 * 17 16 15 39 39 H 1.08995 * 109.47608 * 183.95071 * 18 16 15 40 40 H 1.09005 * 109.46950 * 303.95543 * 18 16 15 41 41 H 1.09001 * 109.47090 * 63.95063 * 18 16 15 42 42 H 1.07990 * 119.96601 * 179.72904 * 19 15 11 43 43 H 1.08000 * 120.03420 * 180.27128 * 20 19 15 44 44 H 1.08999 * 113.61095 * 25.34830 * 21 5 3 45 45 H 1.09000 * 113.61134 * 156.24906 * 21 5 3 46 46 H 1.08996 * 109.47255 * 179.97438 * 25 24 22 47 47 H 1.09000 * 109.47721 * 299.99930 * 25 24 22 48 48 H 1.09002 * 109.46863 * 59.99959 * 25 24 22 49 49 H 1.08997 * 113.61062 * 203.67638 * 26 5 3 50 50 H 1.08998 * 113.61359 * 334.58643 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 7 4.1919 0.2129 0.7912 7 6 4.0242 0.1812 2.1281 8 8 3.4312 1.0831 2.6879 9 6 4.5600 -0.9477 2.9122 10 6 4.3864 -0.9822 4.2987 11 6 4.8879 -2.0366 5.0275 12 6 4.7017 -2.0743 6.5225 13 8 5.9358 -1.7477 7.1647 14 14 3.3981 -0.8388 7.0173 15 6 5.5678 -3.0674 4.3853 16 7 6.0738 -4.1309 5.1245 17 6 7.5314 -4.2317 4.9721 18 6 5.4171 -5.3909 4.7515 19 6 5.7474 -3.0332 3.0049 20 6 5.2430 -1.9851 2.2701 21 6 4.1098 2.6788 0.3133 22 6 4.0435 2.9566 -1.1977 23 1 3.0855 3.3596 -1.5260 24 8 5.1579 3.7021 -1.6920 25 6 4.8519 4.5267 -2.8182 26 6 4.1760 1.4382 -1.4029 27 1 -0.3633 0.5139 0.8901 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 4.7269 -0.4676 0.3533 31 1 3.8593 -0.1825 4.7976 32 1 4.3883 -3.0736 6.8245 33 1 6.6613 -2.3506 6.9521 34 1 2.1097 -1.1673 6.3560 35 1 3.2277 -0.8435 8.4925 36 1 7.9977 -3.3104 5.3210 37 1 7.7769 -4.3881 3.9217 38 1 7.9009 -5.0718 5.5601 39 1 5.7808 -6.1939 5.3925 40 1 4.3388 -5.2887 4.8736 41 1 5.6444 -5.6251 3.7115 42 1 6.2792 -3.8323 2.5101 43 1 5.3787 -1.9612 1.1989 44 1 3.4249 3.2908 0.9002 45 1 5.1240 2.6752 0.7126 46 1 5.7492 5.0596 -3.1328 47 1 4.4926 3.9042 -3.6376 48 1 4.0804 5.2459 -2.5429 49 1 5.2084 1.0955 -1.4728 50 1 3.5446 1.0489 -2.2015 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:47 Heat of formation + Delta-G solvation = -109.272291 kcal Electronic energy + Delta-G solvation = -34501.782731 eV Core-core repulsion = 29884.078033 eV Total energy + Delta-G solvation = -4617.704698 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.176 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.67305 -41.59665 -40.54698 -39.83965 -37.85651 -37.70710 -37.38109 -37.14230 -34.58947 -32.71947 -31.32582 -29.36948 -28.57450 -27.91687 -27.12448 -26.93712 -26.66597 -25.47519 -23.70446 -23.04807 -22.75644 -21.20598 -20.84224 -19.55179 -19.03476 -18.22909 -17.95722 -17.83542 -17.59266 -17.34574 -17.23239 -16.79957 -16.43277 -16.10267 -16.05800 -15.88517 -15.69839 -15.29031 -15.16841 -15.11502 -14.89752 -14.54666 -14.46707 -14.20682 -13.96041 -13.73812 -13.60806 -13.51906 -13.36040 -13.12835 -13.05889 -12.98052 -12.72399 -12.63201 -12.57241 -12.35508 -12.23325 -12.04074 -11.97446 -11.81672 -11.41914 -11.30626 -11.06614 -10.60305 -10.50351 -10.09859 -9.84020 -9.61137 -4.94644 -0.43756 0.15057 0.78521 1.30608 1.35972 1.51956 1.62811 1.77058 1.83696 2.58760 2.72704 2.78700 3.02458 3.16709 3.39771 3.47401 3.52582 3.63541 3.71077 3.90223 3.97089 4.02826 4.11857 4.15300 4.18361 4.19296 4.36462 4.39576 4.41464 4.44974 4.47327 4.54334 4.56603 4.58157 4.59526 4.65651 4.67027 4.72939 4.76032 4.81553 4.88263 4.94379 4.99269 5.02022 5.07635 5.11590 5.17800 5.21227 5.52083 5.77231 6.14837 6.19962 6.27638 6.45661 6.64506 6.97295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.353 6.353 3 C 0.475 3.525 4 O -0.521 6.521 5 C 0.154 3.846 6 N -0.688 5.688 7 C 0.562 3.438 8 O -0.562 6.562 9 C -0.144 4.144 10 C -0.058 4.058 11 C -0.113 4.113 12 C -0.055 4.055 13 O -0.544 6.544 14 Si 0.767 3.233 15 C 0.128 3.872 16 N -0.529 5.529 17 C 0.022 3.978 18 C 0.026 3.974 19 C -0.150 4.150 20 C -0.054 4.054 21 C -0.116 4.116 22 C 0.064 3.936 23 H 0.093 0.907 24 O -0.385 6.385 25 C 0.021 3.979 26 C -0.121 4.121 27 H 0.052 0.948 28 H 0.071 0.929 29 H 0.132 0.868 30 H 0.426 0.574 31 H 0.135 0.865 32 H 0.081 0.919 33 H 0.375 0.625 34 H -0.276 1.276 35 H -0.286 1.286 36 H 0.073 0.927 37 H 0.045 0.955 38 H 0.087 0.913 39 H 0.086 0.914 40 H 0.061 0.939 41 H 0.046 0.954 42 H 0.154 0.846 43 H 0.165 0.835 44 H 0.068 0.932 45 H 0.113 0.887 46 H 0.099 0.901 47 H 0.056 0.944 48 H 0.044 0.956 49 H 0.142 0.858 50 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.530 -6.826 -7.414 11.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.269 6.269 3 C 0.316 3.684 4 O -0.408 6.408 5 C 0.065 3.935 6 N -0.344 5.344 7 C 0.351 3.649 8 O -0.441 6.441 9 C -0.147 4.147 10 C -0.077 4.077 11 C -0.115 4.115 12 C -0.165 4.165 13 O -0.351 6.351 14 Si 0.671 3.329 15 C 0.034 3.966 16 N -0.251 5.251 17 C -0.123 4.123 18 C -0.120 4.120 19 C -0.170 4.170 20 C -0.073 4.073 21 C -0.154 4.154 22 C 0.005 3.995 23 H 0.111 0.889 24 O -0.304 6.304 25 C -0.075 4.075 26 C -0.158 4.158 27 H 0.071 0.929 28 H 0.089 0.911 29 H 0.150 0.850 30 H 0.267 0.733 31 H 0.152 0.848 32 H 0.098 0.902 33 H 0.224 0.776 34 H -0.201 1.201 35 H -0.213 1.213 36 H 0.092 0.908 37 H 0.064 0.936 38 H 0.105 0.895 39 H 0.105 0.895 40 H 0.080 0.920 41 H 0.065 0.935 42 H 0.172 0.828 43 H 0.182 0.818 44 H 0.087 0.913 45 H 0.131 0.869 46 H 0.117 0.883 47 H 0.075 0.925 48 H 0.062 0.938 49 H 0.160 0.840 50 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 2.824 -5.266 -5.829 8.347 hybrid contribution -0.038 -1.677 -0.879 1.894 sum 2.786 -6.943 -6.708 10.048 Atomic orbital electron populations 1.23578 0.74702 1.05818 1.02505 1.86486 1.24895 1.32250 1.83224 1.23626 0.91552 0.81674 0.71520 1.90678 1.66948 1.37323 1.45864 1.20975 0.84676 0.90716 0.97095 1.45469 1.52892 1.30267 1.05760 1.18506 0.78554 0.85530 0.82276 1.90838 1.43189 1.38915 1.71144 1.19731 1.04768 0.96599 0.93635 1.21047 0.96697 0.96712 0.93221 1.20158 1.00297 0.94491 0.96504 1.25077 0.94598 1.07132 0.89662 1.86695 1.20030 1.57296 1.71054 0.92280 0.74074 0.88897 0.77670 1.18977 0.94899 0.91850 0.90903 1.59448 1.06710 1.03488 1.55425 1.22595 0.84358 1.03871 1.01516 1.22508 0.99339 0.89680 1.00465 1.21838 1.01494 1.00023 0.93664 1.21485 0.93211 0.91255 1.01362 1.23474 1.02794 0.92161 0.96988 1.23542 0.90642 0.91541 0.93791 0.88867 1.87910 1.33756 1.60032 1.48654 1.23017 1.02708 0.94010 0.87745 1.23843 1.04548 0.96110 0.91348 0.92925 0.91059 0.84992 0.73319 0.84823 0.90190 0.77604 1.20144 1.21267 0.90819 0.93630 0.89465 0.89524 0.91997 0.93518 0.82804 0.81762 0.91327 0.86858 0.88269 0.92530 0.93776 0.84003 0.87781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.35 -1.69 10.42 -51.37 -0.54 -2.23 16 3 C 0.47 3.48 6.45 71.24 0.46 3.94 16 4 O -0.52 -6.80 15.11 21.96 0.33 -6.47 16 5 C 0.15 0.25 1.11 3.38 0.00 0.26 16 6 N -0.69 1.10 5.07 -427.06 -2.17 -1.07 16 7 C 0.56 2.78 7.41 86.69 0.64 3.42 16 8 O -0.56 -7.65 15.38 -4.01 -0.06 -7.71 16 9 C -0.14 -0.24 5.88 -20.07 -0.12 -0.35 16 10 C -0.06 -0.26 8.19 22.50 0.18 -0.08 16 11 C -0.11 -0.32 5.28 -19.78 -0.10 -0.43 16 12 C -0.05 -0.23 2.29 71.23 0.16 -0.07 16 13 O -0.54 -2.73 12.65 -148.98 -1.89 -4.62 16 14 Si 0.77 4.69 30.17 68.60 2.07 6.76 16 15 C 0.13 -0.15 4.65 38.47 0.18 0.03 16 16 N -0.53 1.75 3.67 -745.10 -2.73 -0.98 16 17 C 0.02 -0.15 9.20 127.69 1.17 1.02 16 18 C 0.03 -0.14 9.32 127.69 1.19 1.05 16 19 C -0.15 0.76 8.58 22.36 0.19 0.95 16 20 C -0.05 0.28 9.52 22.50 0.21 0.50 16 21 C -0.12 -0.53 6.15 31.12 0.19 -0.34 16 22 C 0.06 0.08 3.92 31.12 0.12 0.20 16 23 H 0.09 0.25 7.35 -2.39 -0.02 0.23 16 24 O -0.39 -0.95 10.72 -148.98 -1.60 -2.55 16 25 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 26 C -0.12 0.54 7.22 31.12 0.22 0.77 16 27 H 0.05 0.19 8.14 -2.38 -0.02 0.18 16 28 H 0.07 -0.02 8.13 -2.39 -0.02 -0.04 16 29 H 0.13 -0.69 8.14 -2.39 -0.02 -0.71 16 30 H 0.43 -4.10 6.74 -92.71 -0.62 -4.72 16 31 H 0.13 0.81 4.70 -2.91 -0.01 0.80 16 32 H 0.08 0.32 7.78 -2.39 -0.02 0.30 16 33 H 0.37 0.15 8.05 -74.06 -0.60 -0.45 16 34 H -0.28 -2.69 7.11 99.48 0.71 -1.99 16 35 H -0.29 -3.28 7.11 99.48 0.71 -2.57 16 36 H 0.07 -0.47 7.84 -2.39 -0.02 -0.48 16 37 H 0.05 -0.38 7.08 -2.39 -0.02 -0.40 16 38 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 39 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 40 H 0.06 -0.20 8.12 -2.38 -0.02 -0.22 16 41 H 0.05 -0.34 7.46 -2.39 -0.02 -0.36 16 42 H 0.15 -1.48 7.01 -2.92 -0.02 -1.50 16 43 H 0.17 -2.12 6.40 -2.91 -0.02 -2.13 16 44 H 0.07 0.71 7.64 -2.39 -0.02 0.70 16 45 H 0.11 0.41 8.14 -2.39 -0.02 0.39 16 46 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 47 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 48 H 0.04 -0.08 8.14 -2.39 -0.02 -0.10 16 49 H 0.14 -1.28 8.14 -2.39 -0.02 -1.30 16 50 H 0.10 -0.74 8.10 -2.39 -0.02 -0.76 16 Total: 0.00 -23.14 409.63 0.37 -22.77 By element: Atomic # 1 Polarization: -16.99 SS G_CDS: -0.20 Total: -17.19 kcal Atomic # 6 Polarization: 6.14 SS G_CDS: 7.15 Total: 13.28 kcal Atomic # 7 Polarization: 2.85 SS G_CDS: -4.90 Total: -2.05 kcal Atomic # 8 Polarization: -19.83 SS G_CDS: -3.75 Total: -23.57 kcal Atomic # 14 Polarization: 4.69 SS G_CDS: 2.07 Total: 6.76 kcal Total: -23.14 0.37 -22.77 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.500 kcal (2) G-P(sol) polarization free energy of solvation -23.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds