Wall clock time and date at job start Sun Mar 7 2021 00:15:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34220 * 117.00104 * 2 1 4 4 O 1.20820 * 120.00538 * 0.02562 * 3 2 1 5 5 C 1.50709 * 119.99797 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.84844 * 25.33284 * 5 3 2 7 7 C 1.34780 * 120.00162 * 309.66783 * 6 5 3 8 8 O 1.21652 * 120.00004 * 0.02562 * 7 6 5 9 9 C 1.47043 * 119.99897 * 179.97438 * 7 6 5 10 10 C 1.36221 * 123.49003 * 180.02562 * 9 7 6 11 11 Cl 1.73597 * 124.60718 * 0.03911 * 10 9 7 12 12 S 1.70448 * 110.78865 * 180.02562 * 10 9 7 13 13 C 1.75489 * 92.46760 * 0.02562 * 12 10 9 14 14 C 1.50698 * 124.68833 * 179.97438 * 13 12 10 15 15 O 1.42893 * 109.47374 * 245.02604 * 14 13 12 16 16 Si 1.86299 * 109.47037 * 5.02677 * 14 13 12 17 17 C 1.32697 * 110.62817 * 359.97438 * 13 12 10 18 18 C 1.53776 * 113.61340 * 254.13756 * 5 3 2 19 19 C 1.54056 * 86.98453 * 219.97979 * 18 5 3 20 20 H 1.08998 * 113.69819 * 139.99444 * 19 18 5 21 21 O 1.42905 * 113.61104 * 270.88552 * 19 18 5 22 22 C 1.42898 * 113.99789 * 247.49151 * 21 19 18 23 23 C 1.53775 * 87.07577 * 25.43096 * 19 18 5 24 24 H 1.09002 * 109.46873 * 300.00337 * 1 2 3 25 25 H 1.08999 * 109.47108 * 59.99197 * 1 2 3 26 26 H 1.09000 * 109.47544 * 179.97438 * 1 2 3 27 27 H 0.97000 * 120.00088 * 129.66194 * 6 5 3 28 28 H 1.09005 * 109.47224 * 125.02016 * 14 13 12 29 29 H 0.96700 * 114.00167 * 60.00132 * 15 14 13 30 30 H 1.48496 * 110.00130 * 179.97438 * 16 14 13 31 31 H 1.48500 * 110.00102 * 301.32038 * 16 14 13 32 32 H 1.08000 * 123.44801 * 179.97438 * 17 13 12 33 33 H 1.09000 * 113.61833 * 334.48541 * 18 5 3 34 34 H 1.09001 * 113.61413 * 105.38961 * 18 5 3 35 35 H 1.09003 * 109.46921 * 300.00122 * 22 21 19 36 36 H 1.08998 * 109.47220 * 60.00201 * 22 21 19 37 37 H 1.09004 * 109.47071 * 180.02562 * 22 21 19 38 38 H 1.08999 * 113.61584 * 220.02077 * 23 19 18 39 39 H 1.09006 * 113.61574 * 89.12005 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2092 0.0005 5 6 3.5664 1.2747 -0.0006 6 7 4.1981 0.0860 -0.5787 7 6 3.8370 -1.1419 -0.1563 8 8 2.9863 -1.2632 0.7048 9 6 4.4706 -2.3350 -0.7370 10 6 4.1601 -3.6078 -0.3640 11 17 2.9810 -4.0223 0.8407 12 16 5.0864 -4.7383 -1.2412 13 6 5.9172 -3.4775 -2.1355 14 6 6.9723 -3.7222 -3.1833 15 8 8.2225 -3.1976 -2.7320 16 14 7.1387 -5.5537 -3.4811 17 6 5.4879 -2.2788 -1.7618 18 6 4.1620 1.6912 1.3546 19 6 5.1660 2.5465 0.5586 20 1 5.3699 3.5171 1.0108 21 8 6.3555 1.8428 0.1950 22 6 7.5336 2.3149 0.8516 23 6 4.1138 2.5977 -0.5617 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5140 -0.8899 26 1 -0.3634 -1.0276 -0.0005 27 1 4.8761 0.1826 -1.2656 28 1 6.6845 -3.2280 -4.1112 29 1 8.5408 -3.5927 -1.9088 30 1 8.1758 -5.8084 -4.5129 31 1 7.4996 -6.2432 -2.2164 32 1 5.8612 -1.3557 -2.1800 33 1 3.4797 2.2781 1.9696 34 1 4.6236 0.8682 1.9002 35 1 7.6921 3.3644 0.6033 36 1 7.4151 2.2106 1.9301 37 1 8.3924 1.7301 0.5218 38 1 4.5365 2.5060 -1.5622 39 1 3.4183 3.4320 -0.4698 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:56 Heat of formation + Delta-G solvation = -111.865546 kcal Electronic energy + Delta-G solvation = -29276.272995 eV Core-core repulsion = 24919.847066 eV Total energy + Delta-G solvation = -4356.425928 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.051 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.33257 -40.51953 -40.03081 -38.87833 -37.88438 -37.51200 -37.04254 -36.66332 -33.94614 -31.66670 -29.20027 -27.86407 -27.20791 -26.98838 -26.63774 -25.19501 -22.66881 -22.16516 -20.88109 -20.28538 -19.41372 -18.96445 -18.18759 -17.97769 -17.49825 -17.27780 -17.25184 -16.64468 -16.56149 -16.15916 -15.99198 -15.75365 -15.61601 -15.26986 -14.74096 -14.69913 -14.35269 -14.31153 -14.09577 -13.94847 -13.61958 -13.56463 -13.20747 -12.99853 -12.81526 -12.57044 -12.56073 -12.42714 -12.19165 -12.03337 -11.91499 -11.83794 -11.48545 -11.30282 -10.92659 -10.67923 -10.53753 -10.08825 -9.85998 -9.65482 -5.18852 -0.54280 -0.16136 0.46950 0.75775 1.05977 1.13379 1.23365 1.41881 1.78742 1.90743 2.03852 2.38886 2.50364 3.08815 3.11581 3.33062 3.40627 3.47522 3.84094 3.89911 3.93115 4.11602 4.27273 4.31847 4.36195 4.38339 4.40792 4.46320 4.49821 4.53510 4.60369 4.70593 4.73707 4.75298 4.81183 4.83325 4.94428 5.35861 5.60581 6.05603 6.18086 6.49036 6.91591 7.31563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.310 6.310 3 C 0.468 3.532 4 O -0.510 6.510 5 C 0.164 3.836 6 N -0.696 5.696 7 C 0.572 3.428 8 O -0.477 6.477 9 C -0.151 4.151 10 C -0.115 4.115 11 Cl 0.026 6.974 12 S 0.232 5.768 13 C -0.234 4.234 14 C -0.031 4.031 15 O -0.521 6.521 16 Si 0.644 3.356 17 C -0.068 4.068 18 C -0.148 4.148 19 C 0.068 3.932 20 H 0.090 0.910 21 O -0.366 6.366 22 C 0.031 3.969 23 C -0.123 4.123 24 H 0.060 0.940 25 H 0.058 0.942 26 H 0.099 0.901 27 H 0.410 0.590 28 H 0.131 0.869 29 H 0.379 0.621 30 H -0.230 1.230 31 H -0.236 1.236 32 H 0.157 0.843 33 H 0.107 0.893 34 H 0.093 0.907 35 H 0.046 0.954 36 H 0.044 0.956 37 H 0.089 0.911 38 H 0.095 0.905 39 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.297 -0.834 -2.442 4.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.224 6.224 3 C 0.310 3.690 4 O -0.398 6.398 5 C 0.075 3.925 6 N -0.351 5.351 7 C 0.357 3.643 8 O -0.351 6.351 9 C -0.170 4.170 10 C -0.261 4.261 11 Cl 0.055 6.945 12 S 0.497 5.503 13 C -0.351 4.351 14 C -0.143 4.143 15 O -0.328 6.328 16 Si 0.543 3.457 17 C -0.098 4.098 18 C -0.187 4.187 19 C 0.009 3.991 20 H 0.108 0.892 21 O -0.284 6.284 22 C -0.066 4.066 23 C -0.161 4.161 24 H 0.079 0.921 25 H 0.076 0.924 26 H 0.117 0.883 27 H 0.247 0.753 28 H 0.149 0.851 29 H 0.227 0.773 30 H -0.153 1.153 31 H -0.160 1.160 32 H 0.175 0.825 33 H 0.125 0.875 34 H 0.111 0.889 35 H 0.064 0.936 36 H 0.063 0.937 37 H 0.108 0.892 38 H 0.113 0.887 39 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.875 -2.782 -2.343 4.636 hybrid contribution 0.523 2.267 0.888 2.491 sum 3.399 -0.515 -1.454 3.733 Atomic orbital electron populations 1.23283 0.77733 1.03580 1.01964 1.87041 1.22127 1.31063 1.82165 1.23623 0.90994 0.82243 0.72152 1.90674 1.66270 1.36713 1.46175 1.20998 0.85462 0.87674 0.98378 1.45334 1.43246 1.03447 1.43116 1.17345 0.82119 0.82037 0.82753 1.90918 1.29198 1.85530 1.29438 1.20160 1.02190 0.92619 1.02001 1.25478 1.01300 0.98395 1.00977 1.98437 1.52868 1.92387 1.50802 1.83379 1.30271 1.06549 1.30130 1.24718 1.06882 0.96757 1.06782 1.24381 0.81725 1.11683 0.96532 1.86641 1.35501 1.65069 1.45564 0.95204 0.91836 0.74434 0.84249 1.21039 0.94666 0.98645 0.95402 1.23936 0.98358 1.01320 0.95044 1.23035 0.85260 0.95267 0.95523 0.89168 1.87851 1.15007 1.58787 1.66791 1.22861 0.87197 0.99537 0.96961 1.23603 0.97213 0.94923 1.00331 0.92124 0.92376 0.88301 0.75315 0.85103 0.77307 1.15326 1.15990 0.82510 0.87516 0.88875 0.93585 0.93746 0.89228 0.88689 0.85592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.14 16 2 O -0.31 -1.47 6.30 -47.58 -0.30 -1.77 16 3 C 0.47 1.96 7.07 36.01 0.25 2.21 16 4 O -0.51 -2.98 15.79 -18.75 -0.30 -3.28 16 5 C 0.16 0.22 1.11 -132.16 -0.15 0.08 16 6 N -0.70 -0.54 4.74 -49.10 -0.23 -0.77 16 7 C 0.57 1.62 7.14 -12.69 -0.09 1.53 16 8 O -0.48 -2.59 11.43 -20.00 -0.23 -2.81 16 9 C -0.15 -0.22 5.98 -104.59 -0.63 -0.84 16 10 C -0.11 -0.19 6.87 30.01 0.21 0.02 16 11 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 12 S 0.23 -0.20 20.19 -107.50 -2.17 -2.38 16 13 C -0.23 0.34 5.65 -36.20 -0.20 0.14 16 14 C -0.03 0.07 2.94 36.00 0.11 0.18 16 15 O -0.52 0.52 12.88 -35.23 -0.45 0.06 16 16 Si 0.64 -1.53 30.92 -169.99 -5.26 -6.79 16 17 C -0.07 0.06 9.75 -39.00 -0.38 -0.32 16 18 C -0.15 -0.08 7.27 -25.78 -0.19 -0.27 16 19 C 0.07 -0.08 4.38 -25.78 -0.11 -0.19 16 20 H 0.09 -0.23 7.87 -51.93 -0.41 -0.64 16 21 O -0.37 0.18 10.00 -35.23 -0.35 -0.17 16 22 C 0.03 -0.07 10.85 101.05 1.10 1.03 16 23 C -0.12 0.11 7.06 -25.92 -0.18 -0.08 16 24 H 0.06 0.15 8.13 -51.93 -0.42 -0.27 16 25 H 0.06 0.11 8.13 -51.93 -0.42 -0.31 16 26 H 0.10 0.09 8.14 -51.93 -0.42 -0.34 16 27 H 0.41 -0.49 7.01 -40.82 -0.29 -0.78 16 28 H 0.13 -0.44 7.96 -51.93 -0.41 -0.86 16 29 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 30 H -0.23 -0.10 7.11 56.52 0.40 0.31 16 31 H -0.24 0.18 7.11 56.52 0.40 0.58 16 32 H 0.16 -0.39 7.10 -52.49 -0.37 -0.77 16 33 H 0.11 0.02 8.09 -51.93 -0.42 -0.40 16 34 H 0.09 0.16 8.14 -51.93 -0.42 -0.26 16 35 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 36 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.09 -0.18 8.11 -51.93 -0.42 -0.61 16 39 H 0.13 -0.10 7.38 -51.93 -0.38 -0.48 16 LS Contribution 359.48 15.07 5.42 5.42 Total: 0.00 -7.80 359.48 -8.95 -16.75 By element: Atomic # 1 Polarization: -3.07 SS G_CDS: -4.47 Total: -7.54 kcal Atomic # 6 Polarization: 3.82 SS G_CDS: 0.80 Total: 4.61 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.23 Total: -0.77 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -1.63 Total: -7.97 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.26 Total: -6.79 kcal Atomic # 16 Polarization: -0.20 SS G_CDS: -2.17 Total: -2.38 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -7.80 -8.95 -16.75 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.117 kcal (2) G-P(sol) polarization free energy of solvation -7.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds