Wall clock time and date at job start Sun Mar 7 2021 00:15:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34220 * 117.00104 * 2 1 4 4 O 1.20820 * 120.00538 * 0.02562 * 3 2 1 5 5 C 1.50709 * 119.99797 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.84844 * 25.33284 * 5 3 2 7 7 C 1.34780 * 120.00162 * 309.66783 * 6 5 3 8 8 O 1.21652 * 120.00004 * 0.02562 * 7 6 5 9 9 C 1.47043 * 119.99897 * 179.97438 * 7 6 5 10 10 C 1.36221 * 123.49003 * 180.02562 * 9 7 6 11 11 Cl 1.73597 * 124.60718 * 0.03911 * 10 9 7 12 12 S 1.70448 * 110.78865 * 180.02562 * 10 9 7 13 13 C 1.75489 * 92.46760 * 0.02562 * 12 10 9 14 14 C 1.50698 * 124.68833 * 179.97438 * 13 12 10 15 15 O 1.42893 * 109.47374 * 245.02604 * 14 13 12 16 16 Si 1.86299 * 109.47037 * 5.02677 * 14 13 12 17 17 C 1.32697 * 110.62817 * 359.97438 * 13 12 10 18 18 C 1.53776 * 113.61340 * 254.13756 * 5 3 2 19 19 C 1.54056 * 86.98453 * 219.97979 * 18 5 3 20 20 H 1.08998 * 113.69819 * 139.99444 * 19 18 5 21 21 O 1.42905 * 113.61104 * 270.88552 * 19 18 5 22 22 C 1.42898 * 113.99789 * 247.49151 * 21 19 18 23 23 C 1.53775 * 87.07577 * 25.43096 * 19 18 5 24 24 H 1.09002 * 109.46873 * 300.00337 * 1 2 3 25 25 H 1.08999 * 109.47108 * 59.99197 * 1 2 3 26 26 H 1.09000 * 109.47544 * 179.97438 * 1 2 3 27 27 H 0.97000 * 120.00088 * 129.66194 * 6 5 3 28 28 H 1.09005 * 109.47224 * 125.02016 * 14 13 12 29 29 H 0.96700 * 114.00167 * 60.00132 * 15 14 13 30 30 H 1.48496 * 110.00130 * 179.97438 * 16 14 13 31 31 H 1.48500 * 110.00102 * 301.32038 * 16 14 13 32 32 H 1.08000 * 123.44801 * 179.97438 * 17 13 12 33 33 H 1.09000 * 113.61833 * 334.48541 * 18 5 3 34 34 H 1.09001 * 113.61413 * 105.38961 * 18 5 3 35 35 H 1.09003 * 109.46921 * 300.00122 * 22 21 19 36 36 H 1.08998 * 109.47220 * 60.00201 * 22 21 19 37 37 H 1.09004 * 109.47071 * 180.02562 * 22 21 19 38 38 H 1.08999 * 113.61584 * 220.02077 * 23 19 18 39 39 H 1.09006 * 113.61574 * 89.12005 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2092 0.0005 5 6 3.5664 1.2747 -0.0006 6 7 4.1981 0.0860 -0.5787 7 6 3.8370 -1.1419 -0.1563 8 8 2.9863 -1.2632 0.7048 9 6 4.4706 -2.3350 -0.7370 10 6 4.1601 -3.6078 -0.3640 11 17 2.9810 -4.0223 0.8407 12 16 5.0864 -4.7383 -1.2412 13 6 5.9172 -3.4775 -2.1355 14 6 6.9723 -3.7222 -3.1833 15 8 8.2225 -3.1976 -2.7320 16 14 7.1387 -5.5537 -3.4811 17 6 5.4879 -2.2788 -1.7618 18 6 4.1620 1.6912 1.3546 19 6 5.1660 2.5465 0.5586 20 1 5.3699 3.5171 1.0108 21 8 6.3555 1.8428 0.1950 22 6 7.5336 2.3149 0.8516 23 6 4.1138 2.5977 -0.5617 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5140 -0.8899 26 1 -0.3634 -1.0276 -0.0005 27 1 4.8761 0.1826 -1.2656 28 1 6.6845 -3.2280 -4.1112 29 1 8.5408 -3.5927 -1.9088 30 1 8.1758 -5.8084 -4.5129 31 1 7.4996 -6.2432 -2.2164 32 1 5.8612 -1.3557 -2.1800 33 1 3.4797 2.2781 1.9696 34 1 4.6236 0.8682 1.9002 35 1 7.6921 3.3644 0.6033 36 1 7.4151 2.2106 1.9301 37 1 8.3924 1.7301 0.5218 38 1 4.5365 2.5060 -1.5622 39 1 3.4183 3.4320 -0.4698 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:15:55 Heat of formation + Delta-G solvation = -110.393419 kcal Electronic energy + Delta-G solvation = -29276.209158 eV Core-core repulsion = 24919.847066 eV Total energy + Delta-G solvation = -4356.362092 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.051 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.46932 -40.71269 -40.07308 -38.84287 -37.95653 -37.67195 -37.05982 -36.78837 -34.03414 -31.63168 -29.36631 -27.79206 -27.21928 -26.93313 -26.60496 -25.26727 -22.76913 -22.14957 -20.89022 -20.41989 -19.41965 -19.14838 -18.25736 -17.90777 -17.64751 -17.46931 -17.22339 -16.68337 -16.46816 -16.08467 -15.98839 -15.76216 -15.69696 -15.26921 -14.84959 -14.69999 -14.44555 -14.34956 -14.26923 -13.90938 -13.63086 -13.56137 -13.22118 -13.02818 -12.90558 -12.57273 -12.54414 -12.45251 -12.19578 -12.02851 -11.96712 -11.78731 -11.74615 -11.47506 -10.87831 -10.65397 -10.57990 -10.22345 -9.85637 -9.62887 -5.02011 -0.57770 -0.15090 0.51126 0.76974 0.96279 1.09333 1.20996 1.54660 1.73590 1.91535 1.97206 2.26139 2.60180 3.07755 3.26444 3.34831 3.49102 3.52569 3.72056 3.90216 3.94153 4.17669 4.21325 4.25199 4.39306 4.46105 4.50513 4.56108 4.58703 4.60196 4.63768 4.70198 4.75920 4.81746 4.83900 4.92895 5.00701 5.28681 5.34664 6.19005 6.43947 6.44291 6.63552 7.19893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.323 6.323 3 C 0.463 3.537 4 O -0.533 6.533 5 C 0.156 3.844 6 N -0.684 5.684 7 C 0.567 3.433 8 O -0.510 6.510 9 C -0.159 4.159 10 C -0.136 4.136 11 Cl 0.005 6.995 12 S 0.259 5.741 13 C -0.225 4.225 14 C -0.029 4.029 15 O -0.535 6.535 16 Si 0.702 3.298 17 C -0.068 4.068 18 C -0.149 4.149 19 C 0.078 3.922 20 H 0.110 0.890 21 O -0.377 6.377 22 C 0.026 3.974 23 C -0.114 4.114 24 H 0.056 0.944 25 H 0.061 0.939 26 H 0.112 0.888 27 H 0.420 0.580 28 H 0.149 0.851 29 H 0.389 0.611 30 H -0.269 1.269 31 H -0.257 1.257 32 H 0.176 0.824 33 H 0.106 0.894 34 H 0.078 0.922 35 H 0.057 0.943 36 H 0.043 0.957 37 H 0.095 0.905 38 H 0.110 0.890 39 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.523 -0.375 -3.499 5.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.237 6.237 3 C 0.306 3.694 4 O -0.424 6.424 5 C 0.066 3.934 6 N -0.340 5.340 7 C 0.353 3.647 8 O -0.385 6.385 9 C -0.179 4.179 10 C -0.283 4.283 11 Cl 0.034 6.966 12 S 0.524 5.476 13 C -0.342 4.342 14 C -0.141 4.141 15 O -0.343 6.343 16 Si 0.604 3.396 17 C -0.096 4.096 18 C -0.188 4.188 19 C 0.019 3.981 20 H 0.127 0.873 21 O -0.296 6.296 22 C -0.070 4.070 23 C -0.151 4.151 24 H 0.075 0.925 25 H 0.080 0.920 26 H 0.130 0.870 27 H 0.259 0.741 28 H 0.166 0.834 29 H 0.239 0.761 30 H -0.194 1.194 31 H -0.183 1.183 32 H 0.193 0.807 33 H 0.124 0.876 34 H 0.096 0.904 35 H 0.075 0.925 36 H 0.062 0.938 37 H 0.114 0.886 38 H 0.128 0.872 39 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 4.118 -2.324 -3.409 5.829 hybrid contribution 0.202 2.059 1.197 2.390 sum 4.319 -0.265 -2.212 4.860 Atomic orbital electron populations 1.23406 0.77076 1.04523 1.01957 1.87056 1.23044 1.31563 1.82038 1.24230 0.92139 0.81738 0.71290 1.90647 1.67063 1.37230 1.47414 1.21232 0.83809 0.88798 0.99514 1.45233 1.42997 1.02819 1.42926 1.17635 0.81799 0.82852 0.82425 1.90898 1.30685 1.86033 1.30916 1.20243 1.02886 0.92008 1.02737 1.25722 1.01750 0.99459 1.01361 1.98423 1.53857 1.92523 1.51806 1.83294 1.29243 1.05868 1.29189 1.24841 1.06540 0.96408 1.06424 1.24492 0.81122 1.11706 0.96785 1.86623 1.35812 1.65492 1.46382 0.94500 0.90393 0.73437 0.81247 1.21134 0.94038 0.99646 0.94809 1.23954 0.98933 1.01235 0.94696 1.22988 0.84833 0.95472 0.94775 0.87261 1.87829 1.15458 1.59277 1.66989 1.22980 0.86757 1.00330 0.96909 1.23597 0.96956 0.93346 1.01224 0.92502 0.91979 0.86950 0.74077 0.83382 0.76122 1.19412 1.18251 0.80694 0.87598 0.90354 0.92486 0.93786 0.88641 0.87183 0.85599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.15 10.56 113.37 1.20 1.35 16 2 O -0.32 -3.55 6.30 -43.33 -0.27 -3.83 16 3 C 0.46 4.41 7.07 71.24 0.50 4.91 16 4 O -0.53 -6.89 15.79 21.98 0.35 -6.54 16 5 C 0.16 0.49 1.11 3.38 0.00 0.49 16 6 N -0.68 -1.15 4.74 -427.50 -2.02 -3.17 16 7 C 0.57 3.64 7.14 86.55 0.62 4.26 16 8 O -0.51 -6.34 11.43 19.93 0.23 -6.12 16 9 C -0.16 -0.48 5.98 -19.84 -0.12 -0.60 16 10 C -0.14 -0.51 6.87 67.35 0.46 -0.05 16 11 Cl 0.00 0.04 27.20 -2.72 -0.07 -0.04 16 12 S 0.26 -0.56 20.19 -56.49 -1.14 -1.70 16 13 C -0.22 0.93 5.65 24.51 0.14 1.07 16 14 C -0.03 0.18 2.94 71.24 0.21 0.38 16 15 O -0.53 1.87 12.88 -148.98 -1.92 -0.05 16 16 Si 0.70 -3.81 30.92 68.60 2.12 -1.69 16 17 C -0.07 0.19 9.75 22.70 0.22 0.41 16 18 C -0.15 -0.25 7.27 31.21 0.23 -0.02 16 19 C 0.08 -0.24 4.38 31.21 0.14 -0.10 16 20 H 0.11 -0.73 7.87 -2.39 -0.02 -0.74 16 21 O -0.38 0.79 10.00 -148.98 -1.49 -0.70 16 22 C 0.03 -0.14 10.85 113.37 1.23 1.09 16 23 C -0.11 0.27 7.06 31.12 0.22 0.49 16 24 H 0.06 0.38 8.13 -2.39 -0.02 0.36 16 25 H 0.06 0.32 8.13 -2.39 -0.02 0.30 16 26 H 0.11 0.32 8.14 -2.39 -0.02 0.31 16 27 H 0.42 -1.31 7.01 -92.71 -0.65 -1.96 16 28 H 0.15 -1.35 7.96 -2.38 -0.02 -1.37 16 29 H 0.39 -3.29 8.70 -74.06 -0.64 -3.94 16 30 H -0.27 -0.32 7.11 99.48 0.71 0.39 16 31 H -0.26 0.50 7.11 99.48 0.71 1.20 16 32 H 0.18 -1.21 7.10 -2.91 -0.02 -1.23 16 33 H 0.11 0.16 8.09 -2.39 -0.02 0.14 16 34 H 0.08 0.37 8.14 -2.39 -0.02 0.35 16 35 H 0.06 -0.43 8.14 -2.39 -0.02 -0.45 16 36 H 0.04 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 38 H 0.11 -0.59 8.11 -2.39 -0.02 -0.61 16 39 H 0.13 -0.24 7.38 -2.38 -0.02 -0.26 16 Total: 0.00 -19.26 359.48 0.69 -18.57 By element: Atomic # 1 Polarization: -8.29 SS G_CDS: -0.13 Total: -8.42 kcal Atomic # 6 Polarization: 8.63 SS G_CDS: 5.05 Total: 13.68 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: -2.02 Total: -3.17 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: -3.11 Total: -17.23 kcal Atomic # 14 Polarization: -3.81 SS G_CDS: 2.12 Total: -1.69 kcal Atomic # 16 Polarization: -0.56 SS G_CDS: -1.14 Total: -1.70 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.07 Total: -0.04 kcal Total: -19.26 0.69 -18.57 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.822 kcal (2) G-P(sol) polarization free energy of solvation -19.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds