Wall clock time and date at job start Sun Mar 7 2021 00:16:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34235 * 116.99486 * 2 1 4 4 O 1.20823 * 120.00076 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99620 * 180.02562 * 3 2 1 6 6 N 1.46502 * 112.84992 * 335.55618 * 5 3 2 7 7 C 1.34768 * 119.99826 * 293.58557 * 6 5 3 8 8 O 1.21696 * 120.00453 * 5.00837 * 7 6 5 9 9 C 1.46681 * 119.99915 * 185.01264 * 7 6 5 10 10 C 1.37875 * 126.23237 * 180.02562 * 9 7 6 11 11 C 1.50698 * 126.45883 * 359.97438 * 10 9 7 12 12 C 1.39837 * 107.08248 * 179.97438 * 10 9 7 13 13 C 1.35449 * 107.86298 * 0.02562 * 12 10 9 14 14 C 1.50707 * 125.56199 * 179.97438 * 13 12 10 15 15 O 1.42898 * 109.46994 * 245.02360 * 14 13 12 16 16 Si 1.86300 * 109.46969 * 5.02150 * 14 13 12 17 17 N 1.35531 * 108.87755 * 359.76193 * 13 12 10 18 18 C 1.53782 * 113.61153 * 204.35631 * 5 3 2 19 19 C 1.53780 * 87.08154 * 220.01677 * 18 5 3 20 20 H 1.09003 * 113.60924 * 139.98372 * 19 18 5 21 21 O 1.42888 * 113.61708 * 270.80321 * 19 18 5 22 22 C 1.42905 * 113.99973 * 208.47236 * 21 19 18 23 23 C 1.53780 * 87.17216 * 25.39667 * 19 18 5 24 24 H 1.08999 * 109.46761 * 299.99449 * 1 2 3 25 25 H 1.08999 * 109.47188 * 59.99960 * 1 2 3 26 26 H 1.08998 * 109.46621 * 179.97438 * 1 2 3 27 27 H 0.96995 * 119.99823 * 113.58916 * 6 5 3 28 28 H 1.08999 * 109.46943 * 90.00072 * 11 10 9 29 29 H 1.09003 * 109.46964 * 210.00536 * 11 10 9 30 30 H 1.09002 * 109.46872 * 330.00019 * 11 10 9 31 31 H 1.07994 * 126.06468 * 179.97438 * 12 10 9 32 32 H 1.08994 * 109.47057 * 125.02074 * 14 13 12 33 33 H 0.96704 * 113.99902 * 179.97438 * 15 14 13 34 34 H 1.48504 * 110.00193 * 299.99922 * 16 14 13 35 35 H 1.48496 * 110.00262 * 61.32107 * 16 14 13 36 36 H 0.97001 * 125.68235 * 180.26208 * 17 13 12 37 37 H 1.09004 * 113.60902 * 105.46821 * 18 5 3 38 38 H 1.08997 * 113.61721 * 334.57643 * 18 5 3 39 39 H 1.09003 * 109.47294 * 180.02562 * 22 21 19 40 40 H 1.09004 * 109.47130 * 299.99774 * 22 21 19 41 41 H 1.09000 * 109.47217 * 59.99948 * 22 21 19 42 42 H 1.09003 * 113.61885 * 89.15374 * 23 19 18 43 43 H 1.09005 * 113.61306 * 220.06187 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1990 0.0773 0.5576 7 6 4.0461 -0.2191 1.8633 8 8 3.3096 0.4557 2.5584 9 6 4.7676 -1.3551 2.4468 10 6 4.7066 -1.7718 3.7597 11 6 3.8889 -1.1467 4.8605 12 6 5.5464 -2.8837 3.8773 13 6 6.0940 -3.1212 2.6614 14 6 7.0626 -4.2294 2.3376 15 8 8.3245 -3.6674 1.9721 16 14 7.2785 -5.3215 3.8315 17 7 5.6251 -2.2024 1.7823 18 6 4.1144 2.5890 0.5806 19 6 5.1635 2.5569 -0.5434 20 1 5.3644 3.5348 -0.9811 21 8 6.3551 1.8499 -0.1942 22 6 7.5249 2.3116 -0.8727 23 6 4.1616 1.7147 -1.3507 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 -0.0005 27 1 4.7279 -0.5022 -0.0127 28 1 2.9051 -1.6149 4.8929 29 1 4.3930 -1.2937 5.8157 30 1 3.7774 -0.0795 4.6690 31 1 5.7270 -3.4516 4.7779 32 1 6.6742 -4.8207 1.5084 33 1 8.9984 -4.3247 1.7505 34 1 7.8075 -4.5272 4.9692 35 1 5.9791 -5.9372 4.2026 36 1 5.8565 -2.1496 0.8417 37 1 4.5400 2.4812 1.5783 38 1 3.4182 3.4242 0.5044 39 1 8.3859 1.7243 -0.5535 40 1 7.3886 2.2006 -1.9485 41 1 7.6926 3.3619 -0.6342 42 1 3.4782 2.3104 -1.9559 43 1 4.6252 0.9020 -1.9098 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:02 Heat of formation + Delta-G solvation = -107.730086 kcal Electronic energy + Delta-G solvation = -29328.456431 eV Core-core repulsion = 25150.119986 eV Total energy + Delta-G solvation = -4178.336445 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.69107 -42.11862 -40.42541 -39.48289 -37.77012 -37.59441 -36.91250 -34.42276 -33.31133 -31.66954 -29.32690 -28.13931 -27.93555 -27.21299 -27.11217 -25.95630 -22.99509 -22.45999 -21.54609 -20.44534 -20.32500 -19.40366 -19.07577 -18.58902 -18.06874 -17.39230 -17.31047 -16.94153 -16.72178 -16.21656 -16.12202 -15.92527 -15.52374 -15.10003 -14.99153 -14.92426 -14.54963 -14.33249 -14.25857 -13.88195 -13.76248 -13.48677 -13.40906 -13.31301 -13.16841 -13.00481 -12.97858 -12.61945 -12.41932 -12.22162 -12.09446 -11.97229 -11.68184 -11.51718 -10.92937 -10.76574 -10.55006 -10.22065 -9.77151 -9.10005 -5.04799 0.40445 1.12161 1.13953 1.51771 1.68216 1.73821 1.84065 1.98810 2.13947 2.42289 2.46688 3.12584 3.15844 3.21960 3.43670 3.68714 3.75171 3.85557 4.06988 4.09674 4.16824 4.22889 4.24224 4.30863 4.32894 4.35248 4.40210 4.43491 4.56330 4.66019 4.66509 4.68519 4.75769 4.86146 4.91436 5.05740 5.20123 5.27169 5.44312 5.47052 5.69067 5.93039 6.04144 6.27044 6.41542 6.46774 6.77548 7.15656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.351 6.351 3 C 0.475 3.525 4 O -0.499 6.499 5 C 0.165 3.835 6 N -0.697 5.697 7 C 0.602 3.398 8 O -0.516 6.516 9 C -0.048 4.048 10 C -0.062 4.062 11 C -0.093 4.093 12 C -0.207 4.207 13 C 0.073 3.927 14 C -0.059 4.059 15 O -0.548 6.548 16 Si 0.715 3.285 17 N -0.519 5.519 18 C -0.122 4.122 19 C 0.068 3.932 20 H 0.092 0.908 21 O -0.364 6.364 22 C 0.028 3.972 23 C -0.144 4.144 24 H 0.065 0.935 25 H 0.063 0.937 26 H 0.101 0.899 27 H 0.402 0.598 28 H 0.069 0.931 29 H 0.064 0.936 30 H 0.083 0.917 31 H 0.142 0.858 32 H 0.075 0.925 33 H 0.386 0.614 34 H -0.247 1.247 35 H -0.252 1.252 36 H 0.417 0.583 37 H 0.096 0.904 38 H 0.121 0.879 39 H 0.089 0.911 40 H 0.044 0.956 41 H 0.046 0.954 42 H 0.116 0.884 43 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.061 -4.820 -5.241 8.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.267 6.267 3 C 0.316 3.684 4 O -0.385 6.385 5 C 0.076 3.924 6 N -0.350 5.350 7 C 0.391 3.609 8 O -0.391 6.391 9 C -0.161 4.161 10 C -0.070 4.070 11 C -0.150 4.150 12 C -0.231 4.231 13 C -0.045 4.045 14 C -0.169 4.169 15 O -0.355 6.355 16 Si 0.614 3.386 17 N -0.116 5.116 18 C -0.160 4.160 19 C 0.009 3.991 20 H 0.110 0.890 21 O -0.282 6.282 22 C -0.068 4.068 23 C -0.181 4.181 24 H 0.084 0.916 25 H 0.082 0.918 26 H 0.120 0.880 27 H 0.238 0.762 28 H 0.088 0.912 29 H 0.082 0.918 30 H 0.101 0.899 31 H 0.160 0.840 32 H 0.093 0.907 33 H 0.234 0.766 34 H -0.172 1.172 35 H -0.177 1.177 36 H 0.255 0.745 37 H 0.115 0.885 38 H 0.139 0.861 39 H 0.108 0.892 40 H 0.063 0.937 41 H 0.065 0.935 42 H 0.134 0.866 43 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 3.746 -3.713 -3.826 6.516 hybrid contribution -0.132 0.235 -1.409 1.435 sum 3.614 -3.478 -5.235 7.251 Atomic orbital electron populations 1.23308 0.76070 1.03858 1.02669 1.86519 1.23585 1.33120 1.83432 1.23640 0.91164 0.81745 0.71892 1.90676 1.66149 1.36407 1.45305 1.21095 0.84730 0.88233 0.98389 1.45258 1.53951 1.25918 1.09843 1.16918 0.80416 0.82574 0.81035 1.90849 1.37135 1.50877 1.60203 1.20037 1.04247 0.98391 0.93432 1.19871 0.98820 0.95617 0.92724 1.20389 0.98092 1.01845 0.94626 1.20455 1.04727 1.01541 0.96410 1.19868 1.00079 0.94368 0.90195 1.24507 0.84435 0.97236 1.10677 1.86497 1.20742 1.37342 1.90920 0.95246 0.85193 0.82194 0.75979 1.41809 1.35096 1.23471 1.11197 1.23591 0.96714 0.95056 1.00634 1.22991 0.85296 0.95183 0.95608 0.89029 1.87930 1.15319 1.58815 1.66126 1.22887 0.87554 0.99891 0.96462 1.23866 0.98829 1.01572 0.93882 0.91644 0.91814 0.88041 0.76226 0.91212 0.91751 0.89864 0.84030 0.90676 0.76558 1.17155 1.17653 0.74500 0.88513 0.86083 0.89247 0.93705 0.93520 0.86606 0.88730 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.12 16 2 O -0.35 -1.41 10.25 -39.27 -0.40 -1.81 16 3 C 0.47 2.10 6.38 36.01 0.23 2.33 16 4 O -0.50 -3.23 15.80 -18.75 -0.30 -3.52 16 5 C 0.16 0.30 1.01 -132.06 -0.13 0.17 16 6 N -0.70 -1.03 4.43 -49.12 -0.22 -1.25 16 7 C 0.60 2.61 7.24 -12.86 -0.09 2.52 16 8 O -0.52 -3.74 13.54 5.19 0.07 -3.67 16 9 C -0.05 -0.18 7.05 -81.98 -0.58 -0.76 16 10 C -0.06 -0.28 6.21 -104.16 -0.65 -0.93 16 11 C -0.09 -0.35 9.83 36.00 0.35 0.00 16 12 C -0.21 -0.75 9.27 -39.98 -0.37 -1.12 16 13 C 0.07 0.16 6.50 -81.95 -0.53 -0.38 16 14 C -0.06 0.07 3.07 36.01 0.11 0.18 16 15 O -0.55 0.63 12.86 -35.23 -0.45 0.17 16 16 Si 0.72 -1.34 30.56 -169.99 -5.19 -6.53 16 17 N -0.52 -0.75 5.99 -5.69 -0.03 -0.79 16 18 C -0.12 -0.22 6.73 -25.92 -0.17 -0.39 16 19 C 0.07 -0.04 4.36 -25.92 -0.11 -0.16 16 20 H 0.09 -0.21 7.88 -51.93 -0.41 -0.62 16 21 O -0.36 -0.11 10.14 -35.23 -0.36 -0.47 16 22 C 0.03 -0.05 10.85 101.05 1.10 1.04 16 23 C -0.14 0.18 7.21 -25.82 -0.19 0.00 16 24 H 0.06 0.16 8.13 -51.93 -0.42 -0.26 16 25 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 26 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.40 -0.41 7.81 -40.82 -0.32 -0.73 16 28 H 0.07 0.23 8.14 -51.93 -0.42 -0.19 16 29 H 0.06 0.16 8.14 -51.93 -0.42 -0.27 16 30 H 0.08 0.43 6.48 -51.93 -0.34 0.09 16 31 H 0.14 0.39 6.19 -52.49 -0.32 0.06 16 32 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 33 H 0.39 -2.41 8.74 45.56 0.40 -2.01 16 34 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 35 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 36 H 0.42 -0.55 8.20 -40.82 -0.33 -0.89 16 37 H 0.10 0.36 7.46 -51.93 -0.39 -0.03 16 38 H 0.12 0.21 7.38 -51.93 -0.38 -0.18 16 39 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.04 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.12 -0.23 8.10 -51.93 -0.42 -0.65 16 43 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 LS Contribution 363.47 15.07 5.48 5.48 Total: 0.00 -10.86 363.47 -7.31 -18.17 By element: Atomic # 1 Polarization: -3.46 SS G_CDS: -5.93 Total: -9.39 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 0.03 Total: 3.62 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.25 Total: -2.04 kcal Atomic # 8 Polarization: -7.87 SS G_CDS: -1.44 Total: -9.31 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.19 Total: -6.53 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.86 -7.31 -18.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.559 kcal (2) G-P(sol) polarization free energy of solvation -10.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds