Wall clock time and date at job start Sun Mar 7 2021 00:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34233 * 116.99809 * 2 1 4 4 O 1.20830 * 119.99633 * 0.02562 * 3 2 1 5 5 C 1.50694 * 119.99987 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.85144 * 334.67017 * 5 3 2 7 7 C 1.34777 * 119.99665 * 50.61032 * 6 5 3 8 8 O 1.21283 * 119.99990 * 359.71991 * 7 6 5 9 9 C 1.50698 * 119.99538 * 179.72653 * 7 6 5 10 10 C 1.50698 * 109.46944 * 179.97438 * 9 7 6 11 11 C 1.34855 * 125.89349 * 85.02145 * 10 9 7 12 12 C 1.40889 * 107.41925 * 180.02562 * 11 10 9 13 13 C 1.34856 * 107.41706 * 359.97438 * 12 11 10 14 14 C 1.50700 * 125.88937 * 180.02562 * 13 12 11 15 15 O 1.42893 * 109.46944 * 119.97630 * 14 13 12 16 16 Si 1.86299 * 109.47225 * 359.97438 * 14 13 12 17 17 N 1.36336 * 108.21682 * 359.73815 * 13 12 11 18 18 C 1.53778 * 113.61426 * 203.46978 * 5 3 2 19 19 C 1.53779 * 87.08708 * 270.80274 * 18 5 3 20 20 H 1.09000 * 113.61076 * 89.19743 * 19 18 5 21 21 O 1.42896 * 113.61640 * 220.02042 * 19 18 5 22 22 C 1.42898 * 114.00121 * 209.99762 * 21 19 18 23 23 C 1.53780 * 113.61316 * 105.86857 * 5 3 2 24 24 H 1.09002 * 109.46855 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.46961 * 299.99209 * 1 2 3 26 26 H 1.08998 * 109.47385 * 60.00205 * 1 2 3 27 27 H 0.97001 * 119.99790 * 230.32745 * 6 5 3 28 28 H 1.09003 * 109.47112 * 299.99065 * 9 7 6 29 29 H 1.08993 * 109.47916 * 59.99687 * 9 7 6 30 30 H 1.08001 * 126.29250 * 0.02562 * 11 10 9 31 31 H 1.07998 * 126.29172 * 180.02562 * 12 11 10 32 32 H 1.08994 * 109.46822 * 239.97485 * 14 13 12 33 33 H 0.96702 * 114.00714 * 299.99747 * 15 14 13 34 34 H 1.48506 * 110.00058 * 58.68231 * 16 14 13 35 35 H 1.48494 * 110.00003 * 179.97438 * 16 14 13 36 36 H 0.97002 * 125.63825 * 180.26426 * 17 13 12 37 37 H 1.09002 * 113.61630 * 25.35628 * 18 5 3 38 38 H 1.09005 * 113.61602 * 156.25217 * 18 5 3 39 39 H 1.09007 * 109.47037 * 59.99743 * 22 21 19 40 40 H 1.09000 * 109.47662 * 179.97438 * 22 21 19 41 41 H 1.09004 * 109.47618 * 300.00363 * 22 21 19 42 42 H 1.08998 * 113.61710 * 203.74749 * 23 5 3 43 43 H 1.09007 * 113.61355 * 334.65222 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1985 0.0861 0.5765 7 6 3.8412 -1.1414 0.1497 8 8 2.9927 -1.2619 -0.7084 9 6 4.4961 -2.3641 0.7390 10 6 3.9226 -3.6003 0.0957 11 6 4.3354 -4.1524 -1.0633 12 6 3.5348 -5.2877 -1.2984 13 6 2.6636 -5.3865 -0.2737 14 6 1.6137 -6.4545 -0.1066 15 8 1.8485 -7.1671 1.1095 16 14 1.6955 -7.6362 -1.5446 17 7 2.9010 -4.3571 0.5882 18 6 4.1139 2.5978 0.5606 19 6 4.0334 3.1485 -0.8729 20 1 3.0731 3.6054 -1.1118 21 8 5.1446 3.9715 -1.2332 22 6 4.8294 4.9892 -2.1856 23 6 4.1607 1.6922 -1.3561 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 4.8772 0.1825 1.2628 28 1 5.5701 -2.3244 0.5570 29 1 4.3103 -2.3942 1.8126 30 1 5.1330 -3.7908 -1.6953 31 1 3.6063 -5.9565 -2.1433 32 1 0.6273 -5.9920 -0.0721 33 1 2.7097 -7.6051 1.1488 34 1 3.0457 -8.2496 -1.6217 35 1 0.6653 -8.6946 -1.3914 36 1 2.4204 -4.1891 1.4139 37 1 3.4354 3.0910 1.2566 38 1 5.1320 2.5218 0.9426 39 1 4.0623 5.6460 -1.7751 40 1 5.7247 5.5704 -2.4062 41 1 4.4604 4.5280 -3.1017 42 1 5.1915 1.3682 -1.4992 43 1 3.5197 1.4555 -2.2054 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:05 Heat of formation + Delta-G solvation = -102.533272 kcal Electronic energy + Delta-G solvation = -28671.765785 eV Core-core repulsion = 24493.654691 eV Total energy + Delta-G solvation = -4178.111094 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.52013 -42.16503 -40.25616 -39.75280 -37.80586 -37.65962 -36.87793 -34.28736 -32.95239 -31.83745 -29.67069 -28.90064 -27.85787 -27.17020 -26.03272 -24.98150 -23.26714 -21.82802 -21.26825 -20.91479 -20.64690 -19.28314 -18.81594 -18.30354 -17.70958 -17.55811 -17.21249 -16.98606 -16.77012 -16.34341 -16.19979 -15.97446 -15.47759 -15.11254 -15.06928 -14.75371 -14.50548 -14.41336 -14.06431 -14.00008 -13.76841 -13.71254 -13.63223 -13.53815 -13.19570 -12.96066 -12.83767 -12.53480 -12.24296 -12.13327 -12.06154 -11.74839 -11.64482 -11.48714 -10.79148 -10.70226 -10.59186 -10.22067 -9.69855 -8.88739 -4.86206 1.01521 1.17447 1.29885 1.64094 1.70188 1.73090 1.86464 1.95512 2.19189 2.50261 2.80148 2.99184 3.23680 3.36949 3.49868 3.65815 3.67515 3.84379 3.93551 4.02769 4.07555 4.24435 4.33488 4.34995 4.36245 4.43395 4.47377 4.48796 4.49750 4.61117 4.64144 4.68741 4.72291 4.77133 4.81091 4.84022 5.20304 5.33677 5.37245 5.44784 6.05637 6.13008 6.21036 6.34559 6.39362 6.67624 6.75053 7.23621 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.310 6.310 3 C 0.477 3.523 4 O -0.505 6.505 5 C 0.156 3.844 6 N -0.719 5.719 7 C 0.506 3.494 8 O -0.478 6.478 9 C -0.069 4.069 10 C 0.039 3.961 11 C -0.173 4.173 12 C -0.186 4.186 13 C -0.009 4.009 14 C -0.055 4.055 15 O -0.538 6.538 16 Si 0.715 3.285 17 N -0.535 5.535 18 C -0.118 4.118 19 C 0.066 3.934 20 H 0.104 0.896 21 O -0.372 6.372 22 C 0.028 3.972 23 C -0.142 4.142 24 H 0.099 0.901 25 H 0.058 0.942 26 H 0.062 0.938 27 H 0.408 0.592 28 H 0.117 0.883 29 H 0.098 0.902 30 H 0.136 0.864 31 H 0.141 0.859 32 H 0.114 0.886 33 H 0.378 0.622 34 H -0.257 1.257 35 H -0.258 1.258 36 H 0.412 0.588 37 H 0.093 0.907 38 H 0.114 0.886 39 H 0.045 0.955 40 H 0.089 0.911 41 H 0.044 0.956 42 H 0.113 0.887 43 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.850 1.071 0.839 3.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.224 6.224 3 C 0.318 3.682 4 O -0.393 6.393 5 C 0.067 3.933 6 N -0.376 5.376 7 C 0.291 3.709 8 O -0.349 6.349 9 C -0.110 4.110 10 C -0.074 4.074 11 C -0.198 4.198 12 C -0.211 4.211 13 C -0.122 4.122 14 C -0.165 4.165 15 O -0.344 6.344 16 Si 0.614 3.386 17 N -0.129 5.129 18 C -0.156 4.156 19 C 0.007 3.993 20 H 0.122 0.878 21 O -0.290 6.290 22 C -0.068 4.068 23 C -0.181 4.181 24 H 0.118 0.882 25 H 0.077 0.923 26 H 0.081 0.919 27 H 0.244 0.756 28 H 0.135 0.865 29 H 0.117 0.883 30 H 0.154 0.846 31 H 0.158 0.842 32 H 0.132 0.868 33 H 0.226 0.774 34 H -0.181 1.181 35 H -0.184 1.184 36 H 0.249 0.751 37 H 0.112 0.888 38 H 0.132 0.868 39 H 0.064 0.936 40 H 0.108 0.892 41 H 0.063 0.937 42 H 0.131 0.869 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.601 0.617 0.294 1.741 hybrid contribution 0.289 0.116 1.599 1.629 sum 1.889 0.733 1.892 2.773 Atomic orbital electron populations 1.23310 0.77340 1.03688 1.02165 1.86999 1.22355 1.30792 1.82250 1.23094 0.90384 0.82324 0.72380 1.90691 1.66174 1.36665 1.45805 1.20941 0.86562 0.86967 0.98806 1.45867 1.43716 1.04295 1.43689 1.20631 0.83012 0.83895 0.83395 1.90812 1.29239 1.85508 1.29308 1.20088 1.01655 0.88506 1.00704 1.19444 0.94710 0.95619 0.97677 1.20577 1.03744 0.98244 0.97198 1.20641 0.99199 1.01472 0.99798 1.20745 1.02831 0.94383 0.94243 1.24772 0.98662 0.95976 0.97062 1.86572 1.41208 1.69627 1.37000 0.94243 0.80996 0.79363 0.83991 1.41774 1.28531 1.21847 1.20763 1.23499 1.03183 0.90908 0.97976 1.23595 0.91171 0.90007 0.94479 0.87850 1.87912 1.33468 1.45980 1.61680 1.22863 1.02013 0.90363 0.91608 1.23944 1.03119 0.95776 0.95268 0.88221 0.92280 0.91898 0.75591 0.86495 0.88340 0.84613 0.84182 0.86796 0.77432 1.18099 1.18351 0.75141 0.88802 0.86758 0.93614 0.89241 0.93736 0.86901 0.89922 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.11 16 2 O -0.31 -1.08 6.33 -47.61 -0.30 -1.38 16 3 C 0.48 1.49 6.98 36.00 0.25 1.74 16 4 O -0.51 -2.49 14.99 -18.75 -0.28 -2.77 16 5 C 0.16 0.03 1.22 -132.16 -0.16 -0.13 16 6 N -0.72 1.34 5.32 -47.93 -0.25 1.09 16 7 C 0.51 0.03 7.18 -10.99 -0.08 -0.05 16 8 O -0.48 -1.89 12.58 -19.65 -0.25 -2.14 16 9 C -0.07 0.16 6.24 -29.04 -0.18 -0.02 16 10 C 0.04 0.03 5.66 -81.79 -0.46 -0.44 16 11 C -0.17 -0.29 10.76 -39.78 -0.43 -0.72 16 12 C -0.19 -0.29 9.37 -39.78 -0.37 -0.66 16 13 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 14 C -0.06 -0.01 3.08 36.01 0.11 0.10 16 15 O -0.54 -0.63 12.88 -35.23 -0.45 -1.08 16 16 Si 0.71 -0.39 30.59 -169.99 -5.20 -5.59 16 17 N -0.53 -0.34 6.07 -5.44 -0.03 -0.37 16 18 C -0.12 0.12 6.96 -25.92 -0.18 -0.06 16 19 C 0.07 0.03 3.90 -25.83 -0.10 -0.07 16 20 H 0.10 0.12 7.06 -51.93 -0.37 -0.24 16 21 O -0.37 -0.45 10.72 -35.23 -0.38 -0.83 16 22 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 23 C -0.14 -0.04 7.29 -25.83 -0.19 -0.23 16 24 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 25 H 0.06 0.06 8.13 -51.93 -0.42 -0.37 16 26 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 27 H 0.41 -2.07 8.64 -40.82 -0.35 -2.42 16 28 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 29 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 30 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 31 H 0.14 0.00 6.22 -52.49 -0.33 -0.33 16 32 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 33 H 0.38 -0.54 8.70 45.56 0.40 -0.14 16 34 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 35 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 36 H 0.41 -0.33 8.96 -40.82 -0.37 -0.69 16 37 H 0.09 -0.06 7.85 -51.93 -0.41 -0.46 16 38 H 0.11 -0.33 8.13 -51.93 -0.42 -0.75 16 39 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 40 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.11 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.08 0.12 8.09 -51.92 -0.42 -0.30 16 LS Contribution 363.14 15.07 5.47 5.47 Total: 0.00 -9.79 363.14 -7.94 -17.73 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -6.10 Total: -11.24 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: -0.16 Total: 1.10 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.29 Total: 0.72 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -1.66 Total: -8.20 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: -5.20 Total: -5.59 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.79 -7.94 -17.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.802 kcal (2) G-P(sol) polarization free energy of solvation -9.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds