Wall clock time and date at job start Sun Mar 7 2021 00:16:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34230 * 116.99832 * 2 1 4 4 O 1.20823 * 120.00413 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99934 * 179.97438 * 3 2 1 6 6 N 1.46501 * 112.84885 * 324.06014 * 5 3 2 7 7 C 1.34772 * 120.00009 * 293.64333 * 6 5 3 8 8 O 1.21289 * 120.00327 * 354.98489 * 7 6 5 9 9 C 1.50701 * 120.00044 * 174.99045 * 7 6 5 10 10 C 1.53537 * 109.82684 * 79.99653 * 9 7 6 11 11 C 1.53039 * 108.56628 * 180.55087 * 10 9 7 12 12 C 1.50202 * 110.31585 * 310.42973 * 11 10 9 13 13 C 1.50701 * 118.54190 * 200.07296 * 12 11 10 14 14 O 1.42900 * 109.47181 * 299.97452 * 13 12 11 15 15 Si 1.86305 * 109.46819 * 179.97438 * 13 12 11 16 16 C 1.31115 * 122.90940 * 20.04808 * 12 11 10 17 17 N 1.38923 * 121.84353 * 359.85639 * 16 12 11 18 18 C 1.53780 * 113.61384 * 192.86407 * 5 3 2 19 19 C 1.53775 * 87.08181 * 270.80092 * 18 5 3 20 20 H 1.08999 * 113.61649 * 89.11842 * 19 18 5 21 21 O 1.42899 * 113.61395 * 220.02135 * 19 18 5 22 22 C 1.42900 * 113.99950 * 209.99662 * 21 19 18 23 23 C 1.53773 * 113.68955 * 95.32854 * 5 3 2 24 24 H 1.09000 * 109.46977 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.46760 * 299.99844 * 1 2 3 26 26 H 1.08997 * 109.46902 * 59.99952 * 1 2 3 27 27 H 0.96997 * 120.00144 * 113.64264 * 6 5 3 28 28 H 1.09000 * 109.81335 * 319.12916 * 9 7 6 29 29 H 1.09000 * 109.61894 * 60.82599 * 10 9 7 30 30 H 1.08998 * 109.62192 * 300.28044 * 10 9 7 31 31 H 1.08996 * 109.32757 * 190.16796 * 11 10 9 32 32 H 1.09006 * 109.18572 * 70.60302 * 11 10 9 33 33 H 1.08992 * 109.47229 * 59.98001 * 13 12 11 34 34 H 0.96695 * 113.99872 * 180.02562 * 14 13 12 35 35 H 1.48507 * 109.99901 * 298.67901 * 15 13 12 36 36 H 1.48498 * 110.00147 * 59.99691 * 15 13 12 37 37 H 1.07999 * 119.07703 * 179.56753 * 16 12 11 38 38 H 0.97006 * 120.55679 * 193.05872 * 17 16 12 39 39 H 1.08997 * 113.61387 * 25.35488 * 18 5 3 40 40 H 1.09003 * 113.61048 * 156.16930 * 18 5 3 41 41 H 1.09001 * 109.47126 * 180.02562 * 22 21 19 42 42 H 1.08995 * 109.47634 * 300.00053 * 22 21 19 43 43 H 1.09000 * 109.47109 * 60.00549 * 22 21 19 44 44 H 1.09003 * 113.61434 * 203.67508 * 23 5 3 45 45 H 1.09001 * 113.61678 * 334.57638 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1914 0.2133 0.7934 7 6 4.0226 0.1823 2.1302 8 8 3.4304 1.0821 2.6877 9 6 4.5697 -0.9702 2.9323 10 6 6.0735 -0.7716 3.1703 11 6 6.6011 -1.9625 3.9737 12 6 5.7297 -2.2106 5.1717 13 6 6.2948 -3.0044 6.3212 14 8 6.6645 -4.3070 5.8644 15 14 5.0096 -3.1578 7.6612 16 6 4.4993 -1.7666 5.2617 17 7 3.9113 -1.0252 4.2446 18 6 4.1095 2.6790 0.3142 19 6 4.0445 2.9560 -1.1970 20 1 3.0867 3.3589 -1.5263 21 8 5.1601 3.6997 -1.6912 22 6 4.8559 4.5241 -2.8180 23 6 4.1771 1.4376 -1.4013 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 4.7267 -0.4673 0.3563 28 1 4.4003 -1.9053 2.3984 29 1 6.2369 0.1491 3.7303 30 1 6.5916 -0.7176 2.2128 31 1 7.6181 -1.7523 4.3046 32 1 6.6040 -2.8493 3.3397 33 1 7.1734 -2.4953 6.7172 34 1 7.0365 -4.8745 6.5533 35 1 4.6400 -1.8113 8.1669 36 1 3.8063 -3.8502 7.1340 37 1 3.9253 -1.9874 6.1495 38 1 3.0808 -0.5482 4.3988 39 1 3.4242 3.2913 0.9003 40 1 5.1229 2.6755 0.7156 41 1 5.7544 5.0548 -3.1330 42 1 4.4961 3.9016 -3.6372 43 1 4.0854 5.2446 -2.5436 44 1 5.2095 1.0948 -1.4702 45 1 3.5464 1.0477 -2.2003 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:08 Heat of formation + Delta-G solvation = -128.577262 kcal Electronic energy + Delta-G solvation = -29350.402122 eV Core-core repulsion = 25143.850197 eV Total energy + Delta-G solvation = -4206.551925 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.161 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.61437 -41.14318 -40.16458 -39.29218 -37.77971 -37.38998 -37.06140 -34.58221 -33.31281 -32.95158 -29.42683 -28.14540 -27.56586 -27.15905 -25.92618 -25.26995 -23.83758 -23.10290 -21.79127 -20.78486 -19.57259 -19.18053 -18.88029 -18.21245 -18.06540 -17.78917 -17.46456 -17.23250 -17.07361 -16.48555 -16.16637 -15.84718 -15.56757 -15.39076 -15.17039 -14.99121 -14.61708 -14.50064 -14.40890 -14.13805 -13.80354 -13.63424 -13.61464 -13.57308 -13.36316 -13.09676 -12.90572 -12.64680 -12.35195 -12.31527 -12.05902 -11.94444 -11.87675 -11.74991 -11.66241 -11.34582 -10.90052 -10.65145 -10.45387 -10.09268 -8.48529 -4.90961 0.89465 1.20413 1.31234 1.43103 1.50824 1.66217 1.69518 2.01682 2.49232 2.72313 2.97671 3.12901 3.34041 3.43594 3.56136 3.60351 3.67803 3.86086 3.93295 3.97268 4.07876 4.17129 4.17735 4.28784 4.30311 4.32335 4.39270 4.46346 4.50989 4.56883 4.58917 4.60309 4.70145 4.71928 4.73543 4.89605 4.94928 5.04665 5.18952 5.24742 5.25296 5.51338 6.07059 6.08638 6.27910 6.57545 6.72996 6.80097 6.91448 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.479 3.521 4 O -0.489 6.489 5 C 0.156 3.844 6 N -0.704 5.704 7 C 0.517 3.483 8 O -0.518 6.518 9 C 0.140 3.860 10 C -0.129 4.129 11 C -0.050 4.050 12 C -0.230 4.230 13 C -0.045 4.045 14 O -0.550 6.550 15 Si 0.666 3.334 16 C 0.132 3.868 17 N -0.732 5.732 18 C -0.111 4.111 19 C 0.065 3.935 20 H 0.101 0.899 21 O -0.370 6.370 22 C 0.027 3.973 23 C -0.141 4.141 24 H 0.105 0.895 25 H 0.065 0.935 26 H 0.066 0.934 27 H 0.412 0.588 28 H 0.095 0.905 29 H 0.077 0.923 30 H 0.082 0.918 31 H 0.076 0.924 32 H 0.072 0.928 33 H 0.065 0.935 34 H 0.377 0.623 35 H -0.258 1.258 36 H -0.254 1.254 37 H 0.123 0.877 38 H 0.408 0.592 39 H 0.095 0.905 40 H 0.110 0.890 41 H 0.090 0.910 42 H 0.044 0.956 43 H 0.046 0.954 44 H 0.119 0.881 45 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.669 -3.744 -1.831 4.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.319 3.681 4 O -0.374 6.374 5 C 0.067 3.933 6 N -0.359 5.359 7 C 0.303 3.697 8 O -0.392 6.392 9 C 0.030 3.970 10 C -0.167 4.167 11 C -0.087 4.087 12 C -0.240 4.240 13 C -0.157 4.157 14 O -0.355 6.355 15 Si 0.568 3.432 16 C 0.013 3.987 17 N -0.365 5.365 18 C -0.149 4.149 19 C 0.006 3.994 20 H 0.119 0.881 21 O -0.288 6.288 22 C -0.069 4.069 23 C -0.179 4.179 24 H 0.123 0.877 25 H 0.084 0.916 26 H 0.085 0.915 27 H 0.249 0.751 28 H 0.112 0.888 29 H 0.096 0.904 30 H 0.101 0.899 31 H 0.094 0.906 32 H 0.091 0.909 33 H 0.083 0.917 34 H 0.223 0.777 35 H -0.183 1.183 36 H -0.179 1.179 37 H 0.140 0.860 38 H 0.245 0.755 39 H 0.114 0.886 40 H 0.128 0.872 41 H 0.108 0.892 42 H 0.062 0.938 43 H 0.064 0.936 44 H 0.137 0.863 45 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 1.161 -2.375 -1.765 3.179 hybrid contribution -0.504 0.140 -0.668 0.848 sum 0.658 -2.236 -2.433 3.369 Atomic orbital electron populations 1.23367 0.75573 1.04156 1.02876 1.86496 1.23908 1.32698 1.83590 1.23124 0.90589 0.81904 0.72520 1.90699 1.66051 1.36345 1.44281 1.21013 0.85851 0.90926 0.95528 1.45679 1.53386 1.30386 1.06497 1.20736 0.79291 0.87525 0.82186 1.90774 1.41038 1.37324 1.70113 1.20959 0.94211 0.96342 0.85446 1.21926 0.92370 1.00636 1.01813 1.19927 0.98217 0.96745 0.93825 1.20092 0.94592 1.09368 0.99941 1.24411 1.05423 0.85073 1.00801 1.86494 1.85067 1.24030 1.39919 0.95551 0.79995 0.83705 0.83915 1.20106 0.92742 0.94453 0.91447 1.44157 1.27704 1.55864 1.08760 1.23480 1.03325 0.91695 0.96379 1.23578 0.91049 0.90112 0.94654 0.88087 1.87945 1.33347 1.59679 1.47802 1.22877 1.02195 0.93913 0.87958 1.23864 1.03256 0.98072 0.92702 0.87681 0.91638 0.91538 0.75142 0.88754 0.90412 0.89937 0.90561 0.90922 0.91728 0.77670 1.18302 1.17876 0.85998 0.75513 0.88609 0.87158 0.89176 0.93756 0.93571 0.86254 0.89381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.77 10.42 -39.26 -0.41 -1.18 16 3 C 0.48 1.50 6.45 36.01 0.23 1.73 16 4 O -0.49 -2.71 15.12 -18.75 -0.28 -2.99 16 5 C 0.16 0.10 1.11 -132.16 -0.15 -0.05 16 6 N -0.70 0.63 5.13 -47.92 -0.25 0.38 16 7 C 0.52 0.78 6.75 -10.99 -0.07 0.71 16 8 O -0.52 -2.76 15.12 5.55 0.08 -2.67 16 9 C 0.14 0.05 3.35 -68.57 -0.23 -0.18 16 10 C -0.13 0.05 5.48 -26.43 -0.14 -0.09 16 11 C -0.05 -0.03 5.75 -28.10 -0.16 -0.19 16 12 C -0.23 -0.47 5.48 -101.34 -0.56 -1.03 16 13 C -0.04 -0.02 2.82 36.01 0.10 0.08 16 14 O -0.55 -0.28 12.76 -35.23 -0.45 -0.73 16 15 Si 0.67 -0.27 29.68 -169.99 -5.04 -5.31 16 16 C 0.13 0.33 9.63 -16.08 -0.15 0.18 16 17 N -0.73 -1.54 5.47 -55.41 -0.30 -1.85 16 18 C -0.11 -0.18 6.15 -25.92 -0.16 -0.34 16 19 C 0.06 0.04 3.92 -25.92 -0.10 -0.07 16 20 H 0.10 0.09 7.36 -51.93 -0.38 -0.30 16 21 O -0.37 -0.51 10.71 -35.23 -0.38 -0.89 16 22 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 23 C -0.14 0.21 7.21 -25.92 -0.19 0.02 16 24 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 25 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 26 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.41 -1.67 8.71 -40.82 -0.36 -2.02 16 28 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 30 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 31 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.06 -0.05 7.96 -51.93 -0.41 -0.46 16 34 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 35 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 36 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 37 H 0.12 0.28 4.37 -52.49 -0.23 0.05 16 38 H 0.41 0.98 8.09 -40.82 -0.33 0.65 16 39 H 0.10 0.36 7.64 -51.93 -0.40 -0.03 16 40 H 0.11 0.15 8.14 -51.93 -0.42 -0.28 16 41 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 42 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 LS Contribution 370.89 15.07 5.59 5.59 Total: 0.00 -9.79 370.89 -7.68 -17.47 By element: Atomic # 1 Polarization: -3.92 SS G_CDS: -6.82 Total: -10.75 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: 0.58 Total: 2.93 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: -0.55 Total: -1.46 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -1.44 Total: -8.46 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.04 Total: -5.31 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -9.79 -7.68 -17.47 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.109 kcal (2) G-P(sol) polarization free energy of solvation -9.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.577 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds