Wall clock time and date at job start Sun Mar 7 2021 00:16:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 117.00340 * 2 1 4 4 O 1.20819 * 120.00085 * 359.97438 * 3 2 1 5 5 C 1.50705 * 120.00323 * 179.97438 * 3 2 1 6 6 N 1.46505 * 112.84461 * 25.14378 * 5 3 2 7 7 C 1.34769 * 120.00019 * 65.92231 * 6 5 3 8 8 O 1.21279 * 120.00240 * 5.19353 * 7 6 5 9 9 C 1.50704 * 119.99807 * 185.19933 * 7 6 5 10 10 C 1.53043 * 109.33097 * 180.85864 * 9 7 6 11 11 C 1.53558 * 108.54814 * 190.15793 * 10 9 7 12 12 N 1.47028 * 107.64764 * 60.97498 * 11 10 9 13 13 C 1.38924 * 118.88504 * 316.32207 * 12 11 10 14 14 C 1.31116 * 121.84722 * 13.29270 * 13 12 11 15 15 C 1.50689 * 118.54498 * 179.61800 * 14 13 12 16 16 O 1.42898 * 109.47291 * 120.02396 * 15 14 13 17 17 Si 1.86298 * 109.47634 * 0.02562 * 15 14 13 18 18 C 1.53949 * 113.61456 * 253.87189 * 5 3 2 19 19 C 1.53782 * 87.01961 * 270.79977 * 18 5 3 20 20 H 1.08997 * 113.61077 * 89.23090 * 19 18 5 21 21 O 1.42904 * 113.61411 * 220.04838 * 19 18 5 22 22 C 1.42898 * 114.00128 * 249.14094 * 21 19 18 23 23 C 1.53774 * 113.61522 * 156.33503 * 5 3 2 24 24 H 1.08999 * 109.46925 * 300.00576 * 1 2 3 25 25 H 1.09006 * 109.46372 * 60.00248 * 1 2 3 26 26 H 1.08996 * 109.46989 * 180.02562 * 1 2 3 27 27 H 0.97004 * 119.99276 * 245.91461 * 6 5 3 28 28 H 1.09003 * 109.32671 * 300.34171 * 9 7 6 29 29 H 1.08999 * 109.62001 * 309.89221 * 10 9 7 30 30 H 1.08998 * 109.61815 * 70.44239 * 10 9 7 31 31 H 1.09003 * 109.83872 * 301.43151 * 11 10 9 32 32 H 1.09005 * 109.81583 * 180.50673 * 11 10 9 33 33 H 0.97004 * 120.55481 * 136.34572 * 12 11 10 34 34 H 1.08004 * 119.07368 * 193.31776 * 13 12 11 35 35 H 1.09008 * 109.47172 * 240.02102 * 15 14 13 36 36 H 0.96705 * 113.99913 * 299.99548 * 16 15 14 37 37 H 1.48498 * 109.99956 * 58.67740 * 17 15 14 38 38 H 1.48502 * 110.00485 * 180.02562 * 17 15 14 39 39 H 1.09007 * 113.61448 * 156.27522 * 18 5 3 40 40 H 1.08995 * 113.66679 * 25.33046 * 18 5 3 41 41 H 1.09002 * 109.47531 * 59.99435 * 22 21 19 42 42 H 1.08998 * 109.46987 * 180.02562 * 22 21 19 43 43 H 1.09000 * 109.46405 * 299.99870 * 22 21 19 44 44 H 1.09000 * 113.61567 * 334.65968 * 23 5 3 45 45 H 1.08997 * 113.69313 * 203.76078 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1986 0.0839 -0.5726 7 6 4.0367 -0.2020 -1.8796 8 8 3.4475 0.5741 -2.6017 9 6 4.5876 -1.4862 -2.4439 10 6 4.2864 -1.5512 -3.9430 11 6 4.6216 -2.9622 -4.4478 12 7 3.7648 -3.9108 -3.7212 13 6 3.5964 -3.7498 -2.3517 14 6 3.9586 -2.6512 -1.7344 15 6 3.7335 -2.5528 -0.2477 16 8 4.9860 -2.3580 0.4119 17 14 2.9463 -4.1256 0.3667 18 6 4.1612 1.6987 1.3558 19 6 4.0336 3.1510 0.8668 20 1 3.0733 3.6088 1.1041 21 8 5.1448 3.9753 1.2245 22 6 4.8376 4.9740 2.1993 23 6 4.1143 2.5956 -0.5650 24 1 -0.3633 0.5139 0.8899 25 1 -0.3632 0.5138 -0.8901 26 1 -0.3633 -1.0276 0.0005 27 1 4.7338 -0.4987 -0.0112 28 1 5.6670 -1.5124 -2.2939 29 1 3.2302 -1.3425 -4.1134 30 1 4.8969 -0.8188 -4.4711 31 1 5.6702 -3.1859 -4.2514 32 1 4.4227 -3.0289 -5.5174 33 1 3.3249 -4.6370 -4.1903 34 1 3.1551 -4.5524 -1.7792 35 1 3.0758 -1.7100 -0.0348 36 1 5.6224 -3.0715 0.2663 37 1 3.8185 -5.2860 0.0540 38 1 2.7184 -4.0410 1.8317 39 1 5.1922 1.3756 1.5004 40 1 3.5207 1.4665 2.2066 41 1 4.4857 4.4943 3.1127 42 1 5.7325 5.5572 2.4163 43 1 4.0601 5.6325 1.8121 44 1 3.4358 3.0867 -1.2626 45 1 5.1322 2.5197 -0.9471 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:10 Heat of formation + Delta-G solvation = -126.031588 kcal Electronic energy + Delta-G solvation = -30957.316884 eV Core-core repulsion = 26750.875348 eV Total energy + Delta-G solvation = -4206.441536 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.161 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.66590 -41.21621 -40.15806 -39.09488 -37.83390 -37.77623 -37.04751 -34.34959 -33.14903 -32.69702 -29.33389 -27.97453 -27.32248 -27.16964 -26.33302 -25.24161 -23.38036 -23.07010 -21.73245 -20.82898 -19.49859 -19.05234 -18.99476 -18.25367 -18.02026 -17.62111 -17.35719 -17.17662 -17.00354 -16.31657 -16.09806 -15.88281 -15.74215 -15.60458 -15.13470 -14.81113 -14.72045 -14.53864 -14.47724 -14.01174 -13.85698 -13.71714 -13.61273 -13.26354 -13.11911 -13.03052 -12.66699 -12.55626 -12.41557 -12.22950 -12.05544 -11.94909 -11.88454 -11.77084 -11.59924 -11.35951 -10.80042 -10.63970 -10.45090 -10.12779 -8.40645 -4.86791 0.83468 1.23730 1.37263 1.43634 1.61736 1.79636 2.00945 2.04614 2.69457 2.77366 3.04419 3.17721 3.41065 3.44353 3.53923 3.70833 3.88970 3.90574 4.04897 4.23335 4.24433 4.27648 4.36287 4.38295 4.40494 4.44105 4.50162 4.51400 4.63768 4.65426 4.67383 4.73015 4.75149 4.80019 4.83943 4.87734 4.88612 5.18668 5.23521 5.27396 5.33166 5.47418 6.11584 6.33365 6.43210 6.50954 6.75898 7.00305 7.23450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.349 6.349 3 C 0.479 3.521 4 O -0.524 6.524 5 C 0.148 3.852 6 N -0.696 5.696 7 C 0.527 3.473 8 O -0.575 6.575 9 C -0.030 4.030 10 C -0.119 4.119 11 C 0.123 3.877 12 N -0.745 5.745 13 C 0.165 3.835 14 C -0.295 4.295 15 C -0.073 4.073 16 O -0.550 6.550 17 Si 0.743 3.257 18 C -0.126 4.126 19 C 0.067 3.933 20 H 0.097 0.903 21 O -0.388 6.388 22 C 0.021 3.979 23 C -0.111 4.111 24 H 0.067 0.933 25 H 0.053 0.947 26 H 0.140 0.860 27 H 0.427 0.573 28 H 0.106 0.894 29 H 0.058 0.942 30 H 0.075 0.925 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.414 0.586 34 H 0.150 0.850 35 H 0.113 0.887 36 H 0.392 0.608 37 H -0.275 1.275 38 H -0.306 1.306 39 H 0.130 0.870 40 H 0.097 0.903 41 H 0.054 0.946 42 H 0.100 0.900 43 H 0.046 0.954 44 H 0.067 0.933 45 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.703 -7.090 0.365 7.134 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.264 6.264 3 C 0.321 3.679 4 O -0.412 6.412 5 C 0.058 3.942 6 N -0.357 5.357 7 C 0.316 3.684 8 O -0.454 6.454 9 C -0.051 4.051 10 C -0.158 4.158 11 C -0.001 4.001 12 N -0.375 5.375 13 C 0.042 3.958 14 C -0.306 4.306 15 C -0.183 4.183 16 O -0.359 6.359 17 Si 0.649 3.351 18 C -0.164 4.164 19 C 0.009 3.991 20 H 0.115 0.885 21 O -0.306 6.306 22 C -0.075 4.075 23 C -0.150 4.150 24 H 0.086 0.914 25 H 0.072 0.928 26 H 0.158 0.842 27 H 0.273 0.727 28 H 0.123 0.877 29 H 0.076 0.924 30 H 0.094 0.906 31 H 0.088 0.912 32 H 0.117 0.883 33 H 0.251 0.749 34 H 0.166 0.834 35 H 0.131 0.869 36 H 0.243 0.757 37 H -0.201 1.201 38 H -0.234 1.234 39 H 0.148 0.852 40 H 0.116 0.884 41 H 0.073 0.927 42 H 0.118 0.882 43 H 0.064 0.936 44 H 0.086 0.914 45 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 0.120 -6.386 0.439 6.402 hybrid contribution 0.575 0.039 0.255 0.631 sum 0.695 -6.346 0.694 6.422 Atomic orbital electron populations 1.23641 0.74510 1.06293 1.02334 1.86465 1.25028 1.31917 1.83029 1.23500 0.91273 0.81834 0.71281 1.90652 1.66884 1.37238 1.46459 1.20993 0.85256 0.88411 0.99523 1.46351 1.52693 1.26164 1.10529 1.21145 0.78133 0.87682 0.81457 1.90697 1.43759 1.51247 1.59652 1.19630 1.01004 0.89239 0.95222 1.21696 1.02365 0.98202 0.93537 1.21663 0.94577 0.86828 0.97043 1.44673 1.53711 1.33747 1.05356 1.20567 0.94298 0.95672 0.85267 1.20376 1.18531 0.95709 0.95959 1.25074 0.89762 1.12926 0.90566 1.86201 1.25533 1.50103 1.74113 0.94326 0.87843 0.73869 0.79033 1.23819 1.04033 0.95280 0.93231 1.23569 0.90747 0.90190 0.94639 0.88478 1.87906 1.34189 1.47614 1.60903 1.23022 1.02760 0.90615 0.91079 1.23394 1.02492 0.91987 0.97094 0.91440 0.92834 0.84183 0.72694 0.87654 0.92351 0.90611 0.91234 0.88343 0.74924 0.83388 0.86918 0.75712 1.20108 1.23441 0.85213 0.88448 0.92727 0.88151 0.93554 0.91386 0.87395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.35 -2.18 8.77 -51.39 -0.45 -2.63 16 3 C 0.48 4.74 6.50 71.24 0.46 5.20 16 4 O -0.52 -7.58 14.99 21.98 0.33 -7.25 16 5 C 0.15 0.93 1.13 3.44 0.00 0.93 16 6 N -0.70 -2.82 3.30 -423.66 -1.40 -4.22 16 7 C 0.53 3.70 6.44 87.66 0.56 4.27 16 8 O -0.57 -8.55 14.84 -3.03 -0.04 -8.60 16 9 C -0.03 -0.03 2.63 -12.42 -0.03 -0.06 16 10 C -0.12 -0.07 4.92 30.80 0.15 0.08 16 11 C 0.12 -0.67 7.16 86.47 0.62 -0.05 16 12 N -0.74 4.68 5.83 -345.86 -2.02 2.66 16 13 C 0.16 -0.80 9.63 83.41 0.80 0.00 16 14 C -0.29 0.61 5.11 -16.76 -0.09 0.52 16 15 C -0.07 0.15 1.70 71.23 0.12 0.27 16 16 O -0.55 1.83 10.40 -148.98 -1.55 0.28 16 17 Si 0.74 -2.69 29.68 68.60 2.04 -0.66 16 18 C -0.13 -0.23 7.23 31.18 0.23 0.00 16 19 C 0.07 0.37 3.89 31.12 0.12 0.49 16 20 H 0.10 0.63 7.06 -2.39 -0.02 0.61 16 21 O -0.39 -2.37 10.71 -148.98 -1.60 -3.96 16 22 C 0.02 0.02 10.85 113.37 1.23 1.25 16 23 C -0.11 -0.93 6.18 31.12 0.19 -0.73 16 24 H 0.07 0.02 8.13 -2.39 -0.02 0.00 16 25 H 0.05 0.18 8.13 -2.38 -0.02 0.17 16 26 H 0.14 -0.92 8.14 -2.39 -0.02 -0.93 16 27 H 0.43 0.46 5.05 -92.71 -0.47 0.00 16 28 H 0.11 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.06 0.33 7.75 -2.39 -0.02 0.31 16 30 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 32 H 0.10 -0.80 8.14 -2.38 -0.02 -0.82 16 33 H 0.41 -4.27 8.96 -92.71 -0.83 -5.10 16 34 H 0.15 -1.27 4.36 -2.91 -0.01 -1.29 16 35 H 0.11 0.14 4.66 -2.38 -0.01 0.13 16 36 H 0.39 -3.55 8.70 -74.05 -0.64 -4.20 16 37 H -0.27 0.39 7.10 99.48 0.71 1.10 16 38 H -0.31 -1.43 7.11 99.48 0.71 -0.72 16 39 H 0.13 -0.10 8.14 -2.38 -0.02 -0.12 16 40 H 0.10 -0.05 8.10 -2.39 -0.02 -0.07 16 41 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 42 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 43 H 0.05 0.02 8.14 -2.39 -0.02 0.00 16 44 H 0.07 0.88 7.85 -2.39 -0.02 0.86 16 45 H 0.11 0.84 8.14 -2.39 -0.02 0.82 16 Total: 0.00 -21.15 356.81 0.02 -21.12 By element: Atomic # 1 Polarization: -9.29 SS G_CDS: -0.86 Total: -10.15 kcal Atomic # 6 Polarization: 7.82 SS G_CDS: 5.57 Total: 13.39 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -3.41 Total: -1.55 kcal Atomic # 8 Polarization: -18.85 SS G_CDS: -3.31 Total: -22.16 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.04 Total: -0.66 kcal Total: -21.15 0.02 -21.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.908 kcal (2) G-P(sol) polarization free energy of solvation -21.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds