Wall clock time and date at job start Sun Mar 7 2021 00:16:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34234 * 116.99531 * 2 1 4 4 O 1.20822 * 120.00278 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99456 * 179.97438 * 3 2 1 6 6 N 1.46503 * 112.85234 * 25.33624 * 5 3 2 7 7 C 1.34775 * 119.99690 * 309.66372 * 6 5 3 8 8 O 1.21625 * 120.00310 * 359.97438 * 7 6 5 9 9 C 1.47262 * 119.99872 * 179.97438 * 7 6 5 10 10 C 1.36336 * 126.97046 * 179.97438 * 9 7 6 11 11 C 1.50992 * 126.78980 * 0.02961 * 10 9 7 12 12 C 1.53397 * 108.25236 * 164.30176 * 11 10 9 13 13 C 1.53152 * 109.04478 * 48.46410 * 12 11 10 14 14 C 1.53128 * 109.52965 * 290.42921 * 13 12 11 15 15 N 1.35210 * 108.66227 * 180.02562 * 10 9 7 16 16 C 1.36422 * 109.89944 * 359.97404 * 15 10 9 17 17 C 1.50699 * 125.49589 * 180.02562 * 16 15 10 18 18 O 1.42903 * 109.47152 * 30.00173 * 17 16 15 19 19 Si 1.86305 * 109.47184 * 149.99645 * 17 16 15 20 20 C 1.34493 * 109.01403 * 0.28197 * 16 15 10 21 21 C 1.53779 * 113.61734 * 254.13550 * 5 3 2 22 22 C 1.54051 * 86.99172 * 219.98341 * 21 5 3 23 23 H 1.08997 * 113.61959 * 139.97378 * 22 21 5 24 24 O 1.42896 * 113.68796 * 270.87870 * 22 21 5 25 25 C 1.42904 * 113.99475 * 247.52414 * 24 22 21 26 26 C 1.53781 * 113.61297 * 156.53237 * 5 3 2 27 27 H 1.08999 * 109.46883 * 300.00336 * 1 2 3 28 28 H 1.08995 * 109.46883 * 59.99912 * 1 2 3 29 29 H 1.08997 * 109.46816 * 179.97438 * 1 2 3 30 30 H 0.97001 * 120.00071 * 129.66302 * 6 5 3 31 31 H 1.09002 * 109.71456 * 44.60981 * 11 10 9 32 32 H 1.09003 * 109.74129 * 284.00861 * 11 10 9 33 33 H 1.09004 * 109.53832 * 288.59917 * 12 11 10 34 34 H 1.09002 * 109.54311 * 168.34250 * 12 11 10 35 35 H 1.08995 * 109.46243 * 170.40849 * 13 12 11 36 36 H 1.09000 * 109.45878 * 50.44762 * 13 12 11 37 37 H 1.08999 * 109.56560 * 291.16037 * 14 13 12 38 38 H 1.08999 * 109.56482 * 170.81590 * 14 13 12 39 39 H 1.08997 * 109.47198 * 269.99851 * 17 16 15 40 40 H 0.96700 * 114.00311 * 180.02562 * 18 17 16 41 41 H 1.48497 * 110.00233 * 300.00062 * 19 17 16 42 42 H 1.48492 * 109.99800 * 61.32455 * 19 17 16 43 43 H 1.08003 * 126.82022 * 179.72991 * 20 16 15 44 44 H 1.08999 * 113.61219 * 334.48843 * 21 5 3 45 45 H 1.09002 * 113.61722 * 105.38429 * 21 5 3 46 46 H 1.09002 * 109.46970 * 180.02562 * 25 24 22 47 47 H 1.09002 * 109.46947 * 299.99949 * 25 24 22 48 48 H 1.08997 * 109.47039 * 59.99895 * 25 24 22 49 49 H 1.08999 * 113.61238 * 254.61441 * 26 5 3 50 50 H 1.09000 * 113.61551 * 25.51396 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1985 0.0861 -0.5766 7 6 3.8373 -1.1416 -0.1540 8 8 2.9867 -1.2626 0.7070 9 6 4.4724 -2.3367 -0.7346 10 6 4.2180 -3.6374 -0.4151 11 6 3.2262 -4.1404 0.6064 12 6 2.9935 -5.6355 0.3544 13 6 4.3483 -6.3347 0.2093 14 6 5.0111 -5.8999 -1.1008 15 7 5.0090 -4.4314 -1.1714 16 6 5.7864 -3.6667 -1.9911 17 6 6.7950 -4.1914 -2.9803 18 8 6.3766 -5.4735 -3.4527 19 14 6.9266 -3.0129 -4.4173 20 6 5.5117 -2.3688 -1.7702 21 6 4.1608 1.6921 1.3561 22 6 5.1654 2.5472 0.5605 23 1 5.3677 3.5177 1.0135 24 8 6.3559 1.8451 0.1975 25 6 7.5330 2.3182 0.8553 26 6 4.1140 2.5978 -0.5606 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 4.8771 0.1825 -1.2630 31 1 2.2856 -3.5995 0.5029 32 1 3.6255 -3.9946 1.6101 33 1 2.4163 -5.7654 -0.5611 34 1 2.4488 -6.0664 1.1945 35 1 4.2007 -7.4146 0.2007 36 1 4.9890 -6.0627 1.0482 37 1 4.4537 -6.3069 -1.9445 38 1 6.0377 -6.2650 -1.1293 39 1 7.7667 -4.2823 -2.4949 40 1 6.9801 -5.8726 -4.0942 41 1 5.6083 -2.8802 -5.0877 42 1 7.3918 -1.6846 -3.9438 43 1 5.9643 -1.5190 -2.2594 44 1 3.4780 2.2791 1.9702 45 1 4.6220 0.8693 1.9024 46 1 8.3927 1.7346 0.5259 47 1 7.6905 3.3680 0.6078 48 1 7.4137 2.2131 1.9336 49 1 4.5375 2.5057 -1.5607 50 1 3.4184 3.4320 -0.4695 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:14 Heat of formation + Delta-G solvation = -105.204296 kcal Electronic energy + Delta-G solvation = -35764.343590 eV Core-core repulsion = 31146.815293 eV Total energy + Delta-G solvation = -4617.528297 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.176 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.69354 -42.09163 -40.16524 -39.31803 -37.94360 -37.43244 -36.85591 -36.60916 -33.81083 -33.35322 -31.19423 -29.64741 -28.83203 -27.77988 -27.05509 -26.68862 -26.07108 -24.49136 -23.87013 -22.44724 -21.57809 -21.19142 -20.16851 -19.42198 -18.80214 -18.50757 -18.21604 -17.67809 -17.22411 -17.16567 -16.84776 -16.63479 -16.16176 -16.07816 -15.84769 -15.65255 -15.41674 -15.16536 -15.07126 -14.87254 -14.65775 -14.48028 -14.37850 -14.15871 -14.06329 -13.76342 -13.52470 -13.47744 -13.17903 -13.09448 -12.83868 -12.74682 -12.49349 -12.41161 -12.10938 -12.02463 -12.00584 -11.93275 -11.81258 -11.75605 -11.41840 -11.20985 -10.63306 -10.60056 -10.42952 -9.88919 -9.47313 -8.90255 -5.03913 0.95295 1.04425 1.32155 1.45235 1.66635 1.87811 2.00957 2.04789 2.32612 2.61138 2.81648 3.10017 3.19781 3.45352 3.53945 3.57446 3.62621 3.73612 3.84573 3.87468 3.92417 4.15434 4.24769 4.32762 4.35916 4.37770 4.41457 4.42489 4.43995 4.47481 4.51017 4.56571 4.58997 4.62111 4.67707 4.73269 4.78059 4.80864 4.82833 4.84858 4.88031 4.92349 4.95558 5.10066 5.22192 5.26699 5.57698 5.68260 5.81379 6.13300 6.17331 6.30080 6.44237 6.79603 7.00832 7.63997 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.308 6.308 3 C 0.469 3.531 4 O -0.513 6.513 5 C 0.165 3.835 6 N -0.700 5.700 7 C 0.593 3.407 8 O -0.508 6.508 9 C -0.226 4.226 10 C 0.119 3.881 11 C -0.054 4.054 12 C -0.129 4.129 13 C -0.140 4.140 14 C 0.115 3.885 15 N -0.422 5.422 16 C 0.036 3.964 17 C -0.047 4.047 18 O -0.552 6.552 19 Si 0.705 3.295 20 C -0.176 4.176 21 C -0.147 4.147 22 C 0.068 3.932 23 H 0.090 0.910 24 O -0.365 6.365 25 C 0.031 3.969 26 C -0.124 4.124 27 H 0.060 0.940 28 H 0.056 0.944 29 H 0.098 0.902 30 H 0.408 0.592 31 H 0.101 0.899 32 H 0.088 0.912 33 H 0.068 0.932 34 H 0.079 0.921 35 H 0.088 0.912 36 H 0.073 0.927 37 H 0.087 0.913 38 H 0.092 0.908 39 H 0.077 0.923 40 H 0.387 0.613 41 H -0.253 1.253 42 H -0.253 1.253 43 H 0.144 0.856 44 H 0.105 0.895 45 H 0.092 0.908 46 H 0.089 0.911 47 H 0.045 0.955 48 H 0.044 0.956 49 H 0.093 0.907 50 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.345 -3.379 -2.265 7.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.221 6.221 3 C 0.311 3.689 4 O -0.402 6.402 5 C 0.075 3.925 6 N -0.355 5.355 7 C 0.382 3.618 8 O -0.384 6.384 9 C -0.236 4.236 10 C 0.002 3.998 11 C -0.091 4.091 12 C -0.167 4.167 13 C -0.178 4.178 14 C -0.006 4.006 15 N -0.098 5.098 16 C -0.073 4.073 17 C -0.157 4.157 18 O -0.359 6.359 19 Si 0.604 3.396 20 C -0.200 4.200 21 C -0.186 4.186 22 C 0.010 3.990 23 H 0.107 0.893 24 O -0.283 6.283 25 C -0.065 4.065 26 C -0.162 4.162 27 H 0.079 0.921 28 H 0.075 0.925 29 H 0.116 0.884 30 H 0.245 0.755 31 H 0.120 0.880 32 H 0.106 0.894 33 H 0.087 0.913 34 H 0.098 0.902 35 H 0.106 0.894 36 H 0.092 0.908 37 H 0.106 0.894 38 H 0.110 0.890 39 H 0.095 0.905 40 H 0.235 0.765 41 H -0.177 1.177 42 H -0.177 1.177 43 H 0.162 0.838 44 H 0.123 0.877 45 H 0.111 0.889 46 H 0.107 0.893 47 H 0.064 0.936 48 H 0.062 0.938 49 H 0.111 0.889 50 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 4.752 -2.879 -1.740 5.822 hybrid contribution 0.116 0.187 0.360 0.422 sum 4.868 -2.692 -1.380 5.731 Atomic orbital electron populations 1.23273 0.78039 1.03465 1.01894 1.87078 1.21860 1.31073 1.82131 1.23678 0.91096 0.82163 0.71972 1.90662 1.66358 1.36748 1.46392 1.20952 0.85417 0.87912 0.98230 1.45314 1.43302 1.03499 1.43336 1.17224 0.81108 0.81770 0.81674 1.90798 1.30819 1.85900 1.30903 1.19696 1.05884 0.91823 1.06153 1.20362 0.94849 0.88950 0.95663 1.20506 0.97639 0.94966 0.96019 1.21725 0.96809 0.95064 1.03056 1.21961 0.97362 1.01637 0.96823 1.22049 1.03168 0.76212 0.99125 1.43830 1.29892 1.06846 1.29246 1.19617 0.99843 0.90275 0.97570 1.24428 0.96277 0.92909 1.02038 1.86424 1.52570 1.32401 1.64482 0.95625 0.85201 0.78638 0.80114 1.21632 1.01676 0.94581 1.02099 1.23925 0.98311 1.01255 0.95146 1.23018 0.85248 0.95198 0.95568 0.89258 1.87874 1.14969 1.58826 1.66670 1.22854 0.87310 0.99426 0.96960 1.23602 0.97239 0.95110 1.00266 0.92148 0.92495 0.88387 0.75530 0.88046 0.89411 0.91312 0.90237 0.89354 0.90803 0.89433 0.88951 0.90532 0.76508 1.17712 1.17738 0.83818 0.87653 0.88891 0.89298 0.93650 0.93752 0.88854 0.85703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.09 10.56 101.05 1.07 1.16 16 2 O -0.31 -1.87 6.30 -47.62 -0.30 -2.17 16 3 C 0.47 2.64 7.07 36.00 0.25 2.89 16 4 O -0.51 -3.62 15.79 -18.75 -0.30 -3.91 16 5 C 0.16 0.51 1.11 -132.16 -0.15 0.36 16 6 N -0.70 -2.26 4.76 -49.04 -0.23 -2.49 16 7 C 0.59 3.06 7.16 -12.59 -0.09 2.97 16 8 O -0.51 -3.54 11.86 -19.97 -0.24 -3.78 16 9 C -0.23 -1.05 6.28 -103.47 -0.65 -1.70 16 10 C 0.12 0.46 6.57 -81.65 -0.54 -0.08 16 11 C -0.05 -0.12 5.32 -27.53 -0.15 -0.26 16 12 C -0.13 0.01 5.98 -26.45 -0.16 -0.15 16 13 C -0.14 0.13 5.92 -26.59 -0.16 -0.03 16 14 C 0.11 0.03 5.32 -3.69 -0.02 0.01 16 15 N -0.42 -1.16 3.11 -107.37 -0.33 -1.50 16 16 C 0.04 0.10 6.18 -81.87 -0.51 -0.41 16 17 C -0.05 0.03 2.98 36.01 0.11 0.14 16 18 O -0.55 0.85 10.65 -35.23 -0.38 0.47 16 19 Si 0.71 -1.06 31.24 -169.99 -5.31 -6.37 16 20 C -0.18 -0.59 9.09 -37.47 -0.34 -0.93 16 21 C -0.15 -0.27 7.27 -25.78 -0.19 -0.46 16 22 C 0.07 0.01 4.38 -25.77 -0.11 -0.10 16 23 H 0.09 -0.14 7.87 -51.93 -0.41 -0.55 16 24 O -0.37 -0.34 10.01 -35.23 -0.35 -0.70 16 25 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 26 C -0.12 -0.08 7.06 -25.92 -0.18 -0.27 16 27 H 0.06 0.19 8.13 -51.93 -0.42 -0.23 16 28 H 0.06 0.17 8.13 -51.93 -0.42 -0.25 16 29 H 0.10 0.15 8.14 -51.93 -0.42 -0.28 16 30 H 0.41 0.76 7.60 -40.82 -0.31 0.45 16 31 H 0.10 0.34 7.40 -51.93 -0.38 -0.05 16 32 H 0.09 0.19 8.14 -51.93 -0.42 -0.23 16 33 H 0.07 0.02 8.12 -51.93 -0.42 -0.40 16 34 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.07 -0.04 8.11 -51.93 -0.42 -0.46 16 37 H 0.09 0.04 8.00 -51.93 -0.42 -0.38 16 38 H 0.09 -0.05 7.69 -51.93 -0.40 -0.45 16 39 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.39 -2.49 8.74 45.56 0.40 -2.09 16 41 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 42 H -0.25 -0.15 6.88 56.52 0.39 0.24 16 43 H 0.14 0.28 6.38 -52.48 -0.33 -0.06 16 44 H 0.11 0.14 8.09 -51.93 -0.42 -0.28 16 45 H 0.09 0.28 8.14 -51.93 -0.42 -0.14 16 46 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 47 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 48 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 49 H 0.09 -0.02 8.11 -51.93 -0.42 -0.44 16 50 H 0.12 0.07 7.38 -51.93 -0.38 -0.32 16 LS Contribution 399.65 15.07 6.02 6.02 Total: 0.00 -9.81 399.65 -9.90 -19.70 By element: Atomic # 1 Polarization: -1.73 SS G_CDS: -7.77 Total: -9.50 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: -0.71 Total: 4.21 kcal Atomic # 7 Polarization: -3.42 SS G_CDS: -0.57 Total: -3.99 kcal Atomic # 8 Polarization: -8.52 SS G_CDS: -1.56 Total: -10.08 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.31 Total: -6.37 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.81 -9.90 -19.70 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.502 kcal (2) G-P(sol) polarization free energy of solvation -9.805 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.307 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.703 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds