Wall clock time and date at job start Sun Mar 7 2021 00:16:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 N 1.46503 * 112.85041 * 23.80295 * 5 3 2 7 7 C 1.34779 * 119.99789 * 309.66797 * 6 5 3 8 8 O 1.21284 * 120.00213 * 0.02562 * 7 6 5 9 9 C 1.50699 * 119.99962 * 179.97438 * 7 6 5 10 10 O 1.42895 * 109.47498 * 180.02562 * 9 7 6 11 11 C 1.35902 * 117.00041 * 180.02562 * 10 9 7 12 12 C 1.38727 * 120.05873 * 359.72295 * 11 10 9 13 13 C 1.38142 * 119.94309 * 179.74632 * 12 11 10 14 14 C 1.38263 * 120.05718 * 0.50726 * 13 12 11 15 15 C 1.50706 * 119.94513 * 179.74551 * 14 13 12 16 16 O 1.42901 * 109.47219 * 120.02402 * 15 14 13 17 17 Si 1.86300 * 109.47064 * 0.02562 * 15 14 13 18 18 C 1.38268 * 120.10949 * 359.76955 * 14 13 12 19 19 C 1.38134 * 120.05554 * 359.97438 * 18 14 13 20 20 C 1.53784 * 113.61378 * 252.49997 * 5 3 2 21 21 C 1.53774 * 87.07946 * 220.01668 * 20 5 3 22 22 H 1.09000 * 113.61523 * 139.98145 * 21 20 5 23 23 O 1.42900 * 113.69511 * 270.87191 * 21 20 5 24 24 C 1.42901 * 114.00194 * 247.53971 * 23 21 20 25 25 C 1.53775 * 113.61501 * 155.00045 * 5 3 2 26 26 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 27 27 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 29 29 H 0.96996 * 120.00095 * 129.66719 * 6 5 3 30 30 H 1.08999 * 109.47591 * 300.00532 * 9 7 6 31 31 H 1.09003 * 109.47175 * 60.00075 * 9 7 6 32 32 H 1.08005 * 120.02570 * 359.97438 * 12 11 10 33 33 H 1.08005 * 119.97314 * 180.27716 * 13 12 11 34 34 H 1.08997 * 109.46913 * 240.02569 * 15 14 13 35 35 H 0.96696 * 113.99900 * 180.02562 * 16 15 14 36 36 H 1.48503 * 109.99736 * 60.00185 * 17 15 14 37 37 H 1.48494 * 110.00028 * 181.31674 * 17 15 14 38 38 H 1.08001 * 119.96949 * 179.97438 * 18 14 13 39 39 H 1.08001 * 120.02809 * 179.97438 * 19 18 14 40 40 H 1.09001 * 113.61326 * 334.56841 * 20 5 3 41 41 H 1.09001 * 113.61595 * 105.46840 * 20 5 3 42 42 H 1.08997 * 109.47232 * 59.99645 * 24 23 21 43 43 H 1.09000 * 109.47336 * 179.97438 * 24 23 21 44 44 H 1.09002 * 109.47181 * 299.99596 * 24 23 21 45 45 H 1.08996 * 113.61430 * 254.52730 * 25 5 3 46 46 H 1.08999 * 113.61356 * 25.34717 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1993 0.0711 -0.5438 7 6 3.8374 -1.1449 -0.0890 8 8 2.9873 -1.2426 0.7705 9 6 4.4881 -2.3833 -0.6494 10 8 3.9398 -3.5392 -0.0128 11 6 4.4223 -4.7473 -0.4059 12 6 5.3992 -4.8192 -1.3883 13 6 5.8918 -6.0482 -1.7823 14 6 5.4044 -7.2066 -1.2060 15 6 5.9395 -8.5464 -1.6419 16 8 6.5216 -9.2145 -0.5208 17 14 7.2342 -8.2995 -2.9585 18 6 4.4266 -7.1380 -0.2308 19 6 3.9346 -5.9112 0.1705 20 6 4.1587 1.7306 1.3446 21 6 5.1632 2.5627 0.5301 22 1 5.3639 3.5453 0.9570 23 8 6.3551 1.8518 0.1895 24 6 7.5302 2.3432 0.8373 25 6 4.1148 2.5823 -0.5949 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 4.8789 0.1492 -1.2315 30 1 4.3028 -2.4375 -1.7221 31 1 5.5621 -2.3432 -0.4678 32 1 5.7770 -3.9147 -1.8419 33 1 6.6556 -6.1044 -2.5439 34 1 5.1250 -9.1502 -2.0420 35 1 6.8875 -10.0851 -0.7284 36 1 8.3503 -7.4777 -2.4254 37 1 7.7471 -9.6146 -3.4194 38 1 4.0473 -8.0444 0.2175 39 1 3.1706 -5.8582 0.9319 40 1 3.4745 2.3337 1.9413 41 1 4.6204 0.9240 1.9142 42 1 7.4081 2.2673 1.9178 43 1 8.3909 1.7509 0.5268 44 1 7.6879 3.3859 0.5618 45 1 4.5411 2.4633 -1.5910 46 1 3.4180 3.4179 -0.5297 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:21 Heat of formation + Delta-G solvation = -146.143421 kcal Electronic energy + Delta-G solvation = -31759.862265 eV Core-core repulsion = 27198.377672 eV Total energy + Delta-G solvation = -4561.484594 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.40952 -41.31227 -40.35991 -39.86227 -38.78578 -37.58678 -37.27952 -36.75587 -34.18420 -32.37389 -31.76650 -29.98766 -28.80640 -27.88077 -27.19459 -26.39452 -25.97785 -24.00173 -22.76631 -22.26933 -21.65400 -20.42293 -19.45789 -18.96169 -18.61776 -18.45191 -17.76140 -17.43676 -17.36133 -17.19527 -16.86354 -16.80848 -16.66468 -16.20730 -15.77261 -15.62623 -15.40152 -15.06541 -14.89189 -14.78383 -14.40743 -14.23939 -14.06907 -13.90607 -13.72303 -13.65559 -13.47458 -13.37444 -13.20731 -12.86005 -12.62643 -12.45280 -12.23388 -12.14468 -12.08114 -11.86320 -11.69138 -11.55023 -11.36474 -10.74908 -10.67630 -10.48206 -10.18916 -9.96780 -9.13244 -4.97989 0.35448 0.37602 1.10279 1.28566 1.45046 1.58417 1.62763 1.86656 1.94966 2.36451 2.57045 2.68278 3.02768 3.24707 3.35869 3.40593 3.58290 3.77720 3.79090 3.84790 3.91349 3.98048 3.98976 4.08009 4.23266 4.30969 4.31881 4.35293 4.40660 4.41514 4.43550 4.45789 4.52032 4.55085 4.66609 4.67793 4.70746 4.76610 4.79548 5.01401 5.21822 5.24505 5.31756 5.55230 5.57852 5.73680 5.99320 6.27447 6.41728 6.45776 6.85234 7.19705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.315 6.315 3 C 0.468 3.532 4 O -0.508 6.508 5 C 0.164 3.836 6 N -0.700 5.700 7 C 0.512 3.488 8 O -0.473 6.473 9 C 0.045 3.955 10 O -0.287 6.287 11 C 0.135 3.865 12 C -0.206 4.206 13 C -0.073 4.073 14 C -0.111 4.111 15 C -0.071 4.071 16 O -0.537 6.537 17 Si 0.679 3.321 18 C -0.050 4.050 19 C -0.146 4.146 20 C -0.148 4.148 21 C 0.068 3.932 22 H 0.091 0.909 23 O -0.368 6.368 24 C 0.030 3.970 25 C -0.122 4.122 26 H 0.058 0.942 27 H 0.100 0.900 28 H 0.061 0.939 29 H 0.412 0.588 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.133 0.867 33 H 0.130 0.870 34 H 0.076 0.924 35 H 0.379 0.621 36 H -0.255 1.255 37 H -0.262 1.262 38 H 0.133 0.867 39 H 0.136 0.864 40 H 0.108 0.892 41 H 0.093 0.907 42 H 0.044 0.956 43 H 0.090 0.910 44 H 0.046 0.954 45 H 0.096 0.904 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.529 1.331 -4.584 5.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.229 6.229 3 C 0.309 3.691 4 O -0.396 6.396 5 C 0.075 3.925 6 N -0.357 5.357 7 C 0.297 3.703 8 O -0.343 6.343 9 C -0.034 4.034 10 O -0.199 6.199 11 C 0.089 3.911 12 C -0.224 4.224 13 C -0.091 4.091 14 C -0.112 4.112 15 C -0.181 4.181 16 O -0.344 6.344 17 Si 0.580 3.420 18 C -0.068 4.068 19 C -0.164 4.164 20 C -0.187 4.187 21 C 0.009 3.991 22 H 0.109 0.891 23 O -0.286 6.286 24 C -0.066 4.066 25 C -0.160 4.160 26 H 0.077 0.923 27 H 0.119 0.881 28 H 0.080 0.920 29 H 0.249 0.751 30 H 0.112 0.888 31 H 0.113 0.887 32 H 0.151 0.849 33 H 0.147 0.853 34 H 0.094 0.906 35 H 0.227 0.773 36 H -0.180 1.180 37 H -0.187 1.187 38 H 0.150 0.850 39 H 0.153 0.847 40 H 0.126 0.874 41 H 0.111 0.889 42 H 0.063 0.937 43 H 0.108 0.892 44 H 0.065 0.935 45 H 0.114 0.886 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 3.150 1.814 -3.853 5.296 hybrid contribution 0.522 -0.681 0.439 0.964 sum 3.671 1.133 -3.413 5.139 Atomic orbital electron populations 1.23300 0.77390 1.03747 1.02046 1.86990 1.22447 1.31223 1.82221 1.23601 0.90991 0.82248 0.72227 1.90680 1.66223 1.36672 1.46069 1.21020 0.85433 0.87223 0.98834 1.45310 1.43459 1.03410 1.43524 1.19979 0.83089 0.83774 0.83487 1.90822 1.28830 1.85708 1.28953 1.22386 0.98845 0.83975 0.98201 1.86161 1.61209 1.11427 1.61094 1.19053 0.93182 0.85061 0.93757 1.21146 1.01085 0.98934 1.01263 1.20708 0.98315 0.91464 0.98590 1.19158 0.99016 0.93008 0.99985 1.24731 1.03842 0.93499 0.95998 1.86595 1.78699 1.35480 1.33604 0.95189 0.80281 0.82949 0.83547 1.20819 0.94439 0.97053 0.94525 1.20498 1.03317 0.89597 1.03017 1.23904 0.98422 1.01259 0.95141 1.22978 0.85185 0.95382 0.95511 0.89090 1.87829 1.15082 1.57335 1.68340 1.22871 0.87191 0.99467 0.97075 1.23608 0.97240 0.94972 1.00153 0.92293 0.88148 0.92023 0.75138 0.88761 0.88714 0.84928 0.85285 0.90647 0.77315 1.18007 1.18716 0.84957 0.84652 0.87375 0.88855 0.93685 0.89187 0.93523 0.88579 0.85548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 101.05 1.07 1.13 16 2 O -0.31 -1.43 6.35 -47.60 -0.30 -1.74 16 3 C 0.47 1.77 7.04 36.01 0.25 2.02 16 4 O -0.51 -2.79 15.81 -18.75 -0.30 -3.09 16 5 C 0.16 0.10 1.11 -132.16 -0.15 -0.04 16 6 N -0.70 0.45 4.77 -47.92 -0.23 0.22 16 7 C 0.51 0.85 7.23 -10.98 -0.08 0.77 16 8 O -0.47 -2.74 13.08 -26.06 -0.34 -3.08 16 9 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 10 O -0.29 -0.84 9.67 -39.34 -0.38 -1.22 16 11 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 12 C -0.21 -0.06 9.04 -39.44 -0.36 -0.41 16 13 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 14 C -0.11 -0.16 5.42 -104.60 -0.57 -0.72 16 15 C -0.07 0.00 2.81 36.01 0.10 0.10 16 16 O -0.54 -0.72 12.74 -35.23 -0.45 -1.17 16 17 Si 0.68 -0.65 29.78 -169.99 -5.06 -5.71 16 18 C -0.05 -0.09 9.60 -39.61 -0.38 -0.47 16 19 C -0.15 -0.33 9.99 -39.44 -0.39 -0.73 16 20 C -0.15 0.00 7.25 -25.92 -0.19 -0.19 16 21 C 0.07 -0.13 4.37 -25.92 -0.11 -0.24 16 22 H 0.09 -0.29 7.87 -51.93 -0.41 -0.70 16 23 O -0.37 0.53 10.02 -35.23 -0.35 0.18 16 24 C 0.03 -0.09 10.85 101.05 1.10 1.01 16 25 C -0.12 0.20 7.07 -25.92 -0.18 0.02 16 26 H 0.06 0.10 8.13 -51.93 -0.42 -0.33 16 27 H 0.10 0.08 8.14 -51.93 -0.42 -0.35 16 28 H 0.06 0.15 8.13 -51.93 -0.42 -0.28 16 29 H 0.41 -1.38 8.48 -40.82 -0.35 -1.73 16 30 H 0.09 -0.30 7.65 -51.93 -0.40 -0.69 16 31 H 0.10 -0.27 7.67 -51.93 -0.40 -0.66 16 32 H 0.13 -0.34 6.30 -52.48 -0.33 -0.67 16 33 H 0.13 -0.21 4.87 -52.48 -0.26 -0.47 16 34 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 35 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 36 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 37 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 38 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 39 H 0.14 0.22 8.06 -52.49 -0.42 -0.20 16 40 H 0.11 -0.02 8.09 -51.93 -0.42 -0.44 16 41 H 0.09 0.10 8.14 -51.93 -0.42 -0.32 16 42 H 0.04 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 44 H 0.05 -0.17 8.14 -51.93 -0.42 -0.59 16 45 H 0.10 -0.28 8.11 -51.93 -0.42 -0.71 16 46 H 0.13 -0.18 7.39 -51.93 -0.38 -0.56 16 LS Contribution 385.57 15.07 5.81 5.81 Total: 0.00 -10.92 385.57 -8.29 -19.21 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -6.38 Total: -11.49 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -0.31 Total: 2.07 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.23 Total: 0.22 kcal Atomic # 8 Polarization: -7.99 SS G_CDS: -2.12 Total: -10.11 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.06 Total: -5.71 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.92 -8.29 -19.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.930 kcal (2) G-P(sol) polarization free energy of solvation -10.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds