Wall clock time and date at job start Sun Mar 7 2021 00:16:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34234 * 117.00086 * 2 1 4 4 O 1.20825 * 119.99853 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00024 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.85031 * 25.33501 * 5 3 2 7 7 C 1.34777 * 119.99828 * 309.38649 * 6 5 3 8 8 O 1.21283 * 120.00222 * 0.28168 * 7 6 5 9 9 C 1.50703 * 120.00290 * 180.27728 * 7 6 5 10 10 C 1.52990 * 109.47398 * 180.02562 * 9 7 6 11 11 O 1.42899 * 109.47438 * 179.97438 * 10 9 7 12 12 C 1.35903 * 117.00425 * 180.02562 * 11 10 9 13 13 C 1.38733 * 120.05420 * 359.72464 * 12 11 10 14 14 C 1.38140 * 119.94326 * 179.70211 * 13 12 11 15 15 C 1.38267 * 120.05339 * 0.59420 * 14 13 12 16 16 C 1.50703 * 119.94368 * 179.70241 * 15 14 13 17 17 O 1.42899 * 109.47346 * 119.98548 * 16 15 14 18 18 Si 1.86301 * 109.47184 * 359.97438 * 16 15 14 19 19 C 1.38272 * 120.11545 * 359.68693 * 15 14 13 20 20 C 1.38151 * 120.05022 * 0.02562 * 19 15 14 21 21 C 1.53784 * 113.61225 * 254.13490 * 5 3 2 22 22 C 1.54052 * 86.98274 * 219.98193 * 21 5 3 23 23 H 1.09006 * 113.61744 * 139.98140 * 22 21 5 24 24 O 1.42903 * 113.69283 * 270.87391 * 22 21 5 25 25 C 1.42896 * 114.00250 * 247.53404 * 24 22 21 26 26 C 1.53776 * 113.61169 * 156.52813 * 5 3 2 27 27 H 1.08999 * 109.46610 * 60.00154 * 1 2 3 28 28 H 1.09004 * 109.46627 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47096 * 300.00044 * 1 2 3 30 30 H 0.97001 * 120.00384 * 129.67096 * 6 5 3 31 31 H 1.08998 * 109.46954 * 300.00581 * 9 7 6 32 32 H 1.09002 * 109.46946 * 59.99717 * 9 7 6 33 33 H 1.08998 * 109.47508 * 300.00200 * 10 9 7 34 34 H 1.09011 * 109.47182 * 60.00188 * 10 9 7 35 35 H 1.08001 * 120.02301 * 0.02562 * 13 12 11 36 36 H 1.07996 * 119.97644 * 180.27897 * 14 13 12 37 37 H 1.09007 * 109.46986 * 239.98081 * 16 15 14 38 38 H 0.96704 * 113.99474 * 299.99676 * 17 16 15 39 39 H 1.48498 * 110.00076 * 180.02562 * 18 16 15 40 40 H 1.48504 * 109.99974 * 301.31989 * 18 16 15 41 41 H 1.07998 * 119.97322 * 180.02562 * 19 15 14 42 42 H 1.07997 * 120.02100 * 180.02562 * 20 19 15 43 43 H 1.08994 * 113.61573 * 334.48433 * 21 5 3 44 44 H 1.09000 * 113.61330 * 105.39100 * 21 5 3 45 45 H 1.08997 * 109.47217 * 179.97438 * 25 24 22 46 46 H 1.09000 * 109.47125 * 299.99982 * 25 24 22 47 47 H 1.09007 * 109.47310 * 59.99614 * 25 24 22 48 48 H 1.08999 * 113.61811 * 254.61272 * 26 5 3 49 49 H 1.09003 * 113.62161 * 25.43358 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2749 0.0006 6 7 4.1986 0.0860 -0.5766 7 6 3.8413 -1.1415 -0.1499 8 8 2.9927 -1.2621 0.7082 9 6 4.4960 -2.3643 -0.7392 10 6 3.9138 -3.6193 -0.0861 11 8 4.5342 -4.7788 -0.6453 12 6 4.1270 -5.9857 -0.1713 13 6 3.1545 -6.0524 0.8158 14 6 2.7379 -7.2806 1.2915 15 6 3.2982 -8.4423 0.7934 16 6 2.8466 -9.7807 1.3189 17 8 2.3096 -10.5571 0.2462 18 14 1.5366 -9.5274 2.6191 19 6 4.2718 -8.3784 -0.1863 20 6 4.6876 -7.1528 -0.6696 21 6 4.1608 1.6921 1.3561 22 6 5.1654 2.5471 0.5605 23 1 5.3678 3.5177 1.0135 24 8 6.3560 1.8451 0.1976 25 6 7.5331 2.3181 0.8553 26 6 4.1141 2.5976 -0.5607 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 4.8772 0.1824 -1.2629 31 1 4.3102 -2.3942 -1.8128 32 1 5.5700 -2.3245 -0.5574 33 1 4.0992 -3.5897 0.9876 34 1 2.8397 -3.6588 -0.2684 35 1 2.7198 -5.1449 1.2082 36 1 1.9776 -7.3332 2.0567 37 1 3.6964 -10.3046 1.7567 38 1 1.5487 -10.1507 -0.1908 39 1 1.0834 -10.8398 3.1458 40 1 2.0732 -8.6946 3.7254 41 1 4.7076 -9.2874 -0.5741 42 1 5.4478 -7.1034 -1.4351 43 1 3.4780 2.2791 1.9702 44 1 4.6220 0.8693 1.9024 45 1 8.3926 1.7340 0.5266 46 1 7.6906 3.3679 0.6078 47 1 7.4138 2.2130 1.9338 48 1 4.5376 2.5056 -1.5608 49 1 3.4180 3.4317 -0.4710 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:25 Heat of formation + Delta-G solvation = -158.315800 kcal Electronic energy + Delta-G solvation = -33537.443673 eV Core-core repulsion = 28819.893626 eV Total energy + Delta-G solvation = -4717.550047 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.41484 -41.25326 -40.44173 -39.94824 -39.05084 -37.61354 -37.14324 -36.83823 -34.21578 -33.16977 -31.96810 -31.34634 -29.20202 -27.92215 -27.25420 -26.84032 -26.21496 -25.32562 -23.54082 -22.67044 -22.16770 -21.49530 -20.42133 -19.50033 -19.04649 -18.38503 -18.14584 -17.59612 -17.46104 -17.29572 -17.21141 -16.99520 -16.78951 -16.34420 -16.22382 -15.94502 -15.85178 -15.60026 -15.40345 -14.83880 -14.70542 -14.65699 -14.42771 -14.28745 -14.16849 -14.00039 -13.67268 -13.62419 -13.47284 -13.28810 -12.93516 -12.82723 -12.80452 -12.64016 -12.24924 -12.10784 -12.06435 -11.99233 -11.74696 -11.61750 -11.59589 -11.39864 -10.79883 -10.73527 -10.38009 -10.18769 -9.97585 -9.12445 -5.00869 0.35787 0.38149 1.10636 1.34110 1.59906 1.65704 1.67659 1.83487 2.00132 2.31406 2.49165 2.73608 3.01397 3.25718 3.39160 3.51526 3.57766 3.74508 3.75790 3.87016 3.87631 3.89260 4.01036 4.08421 4.22358 4.29643 4.30018 4.30703 4.35141 4.37891 4.41302 4.43281 4.45956 4.53951 4.55357 4.63448 4.65278 4.67079 4.67460 4.72357 4.74374 4.79174 5.01691 5.24397 5.26113 5.35426 5.50870 5.55821 5.77763 5.98461 6.35419 6.41976 6.62110 6.81943 7.17868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.314 6.314 3 C 0.468 3.532 4 O -0.509 6.509 5 C 0.162 3.838 6 N -0.700 5.700 7 C 0.518 3.482 8 O -0.499 6.499 9 C -0.137 4.137 10 C 0.075 3.925 11 O -0.316 6.316 12 C 0.139 3.861 13 C -0.202 4.202 14 C -0.076 4.076 15 C -0.159 4.159 16 C -0.062 4.062 17 O -0.542 6.542 18 Si 0.685 3.315 19 C -0.053 4.053 20 C -0.151 4.151 21 C -0.148 4.148 22 C 0.068 3.932 23 H 0.091 0.909 24 O -0.367 6.367 25 C 0.030 3.970 26 C -0.123 4.123 27 H 0.058 0.942 28 H 0.099 0.901 29 H 0.061 0.939 30 H 0.413 0.587 31 H 0.106 0.894 32 H 0.107 0.893 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.134 0.866 36 H 0.128 0.872 37 H 0.112 0.888 38 H 0.379 0.621 39 H -0.255 1.255 40 H -0.259 1.259 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.107 0.893 44 H 0.092 0.908 45 H 0.090 0.910 46 H 0.046 0.954 47 H 0.044 0.956 48 H 0.095 0.905 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.004 3.491 -1.751 4.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.228 6.228 3 C 0.310 3.690 4 O -0.397 6.397 5 C 0.072 3.928 6 N -0.355 5.355 7 C 0.304 3.696 8 O -0.372 6.372 9 C -0.177 4.177 10 C 0.000 4.000 11 O -0.230 6.230 12 C 0.093 3.907 13 C -0.221 4.221 14 C -0.094 4.094 15 C -0.160 4.160 16 C -0.173 4.173 17 O -0.347 6.347 18 Si 0.588 3.412 19 C -0.071 4.071 20 C -0.170 4.170 21 C -0.186 4.186 22 C 0.009 3.991 23 H 0.108 0.892 24 O -0.285 6.285 25 C -0.066 4.066 26 C -0.161 4.161 27 H 0.077 0.923 28 H 0.118 0.882 29 H 0.079 0.921 30 H 0.250 0.750 31 H 0.124 0.876 32 H 0.125 0.875 33 H 0.090 0.910 34 H 0.093 0.907 35 H 0.152 0.848 36 H 0.145 0.855 37 H 0.130 0.870 38 H 0.226 0.774 39 H -0.180 1.180 40 H -0.184 1.184 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.125 0.875 44 H 0.111 0.889 45 H 0.108 0.892 46 H 0.065 0.935 47 H 0.063 0.937 48 H 0.114 0.886 49 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.537 3.035 -0.383 3.423 hybrid contribution 0.640 0.413 -0.112 0.770 sum 2.177 3.447 -0.495 4.107 Atomic orbital electron populations 1.23300 0.77596 1.03643 1.02093 1.87003 1.22237 1.31232 1.82305 1.23626 0.91014 0.82212 0.72183 1.90683 1.66264 1.36700 1.46019 1.21027 0.85423 0.87889 0.98430 1.45488 1.43296 1.03644 1.43104 1.20260 0.82447 0.84030 0.82902 1.90791 1.30159 1.85923 1.30344 1.21404 1.02631 0.90879 1.02781 1.22421 0.97550 0.82054 0.97996 1.85978 1.62451 1.12384 1.62200 1.18986 0.93503 0.85146 0.93050 1.21268 1.01113 0.99156 1.00574 1.20800 0.98405 0.91693 0.98498 1.20229 1.00227 0.95051 1.00475 1.24953 1.04440 0.90666 0.97260 1.86493 1.51142 1.47427 1.49635 0.94760 0.85652 0.81891 0.78926 1.20825 0.94729 0.97030 0.94564 1.20508 1.03232 0.89781 1.03458 1.23934 0.98383 1.01328 0.95004 1.23031 0.85226 0.95322 0.95507 0.89150 1.87838 1.15027 1.58875 1.66779 1.22872 0.87171 0.99602 0.96959 1.23602 0.97207 0.94906 1.00365 0.92307 0.88217 0.92056 0.75037 0.87571 0.87470 0.90971 0.90746 0.84775 0.85459 0.87040 0.77397 1.18032 1.18381 0.84925 0.84887 0.87518 0.88920 0.89160 0.93535 0.93716 0.88624 0.85628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.31 -1.07 6.33 -47.61 -0.30 -1.37 16 3 C 0.47 1.48 7.07 36.01 0.25 1.73 16 4 O -0.51 -2.58 15.79 -18.75 -0.30 -2.88 16 5 C 0.16 0.04 1.10 -132.16 -0.15 -0.11 16 6 N -0.70 0.73 4.76 -47.92 -0.23 0.50 16 7 C 0.52 0.13 7.18 -10.98 -0.08 0.06 16 8 O -0.50 -1.67 12.52 -19.65 -0.25 -1.92 16 9 C -0.14 0.25 6.07 -27.89 -0.17 0.08 16 10 C 0.08 -0.01 4.03 37.15 0.15 0.14 16 11 O -0.32 -0.47 10.14 -19.44 -0.20 -0.66 16 12 C 0.14 0.25 6.69 -39.22 -0.26 -0.01 16 13 C -0.20 -0.22 9.04 -39.43 -0.36 -0.58 16 14 C -0.08 -0.04 8.66 -39.61 -0.34 -0.39 16 15 C -0.16 -0.14 5.39 -104.60 -0.56 -0.70 16 16 C -0.06 -0.02 2.82 36.01 0.10 0.08 16 17 O -0.54 -0.36 12.77 -35.23 -0.45 -0.81 16 18 Si 0.69 -0.29 29.78 -169.99 -5.06 -5.35 16 19 C -0.05 -0.06 9.61 -39.60 -0.38 -0.44 16 20 C -0.15 -0.21 9.99 -39.43 -0.39 -0.61 16 21 C -0.15 0.07 7.27 -25.77 -0.19 -0.12 16 22 C 0.07 -0.13 4.38 -25.78 -0.11 -0.25 16 23 H 0.09 -0.29 7.87 -51.93 -0.41 -0.70 16 24 O -0.37 0.53 10.01 -35.23 -0.35 0.18 16 25 C 0.03 -0.09 10.85 101.05 1.10 1.01 16 26 C -0.12 0.21 7.06 -25.92 -0.18 0.02 16 27 H 0.06 0.06 8.13 -51.93 -0.42 -0.37 16 28 H 0.10 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.06 0.09 8.13 -51.93 -0.42 -0.33 16 30 H 0.41 -1.29 8.47 -40.82 -0.35 -1.63 16 31 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 32 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.07 0.02 7.61 -51.93 -0.40 -0.37 16 34 H 0.07 0.01 7.63 -51.92 -0.40 -0.39 16 35 H 0.13 0.00 6.30 -52.49 -0.33 -0.33 16 36 H 0.13 -0.15 4.87 -52.49 -0.26 -0.40 16 37 H 0.11 0.08 7.96 -51.92 -0.41 -0.33 16 38 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 39 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 40 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 41 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 42 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 43 H 0.11 -0.06 8.09 -51.93 -0.42 -0.48 16 44 H 0.09 0.04 8.14 -51.93 -0.42 -0.38 16 45 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 46 H 0.05 -0.17 8.14 -51.93 -0.42 -0.59 16 47 H 0.04 -0.14 8.14 -51.92 -0.42 -0.56 16 48 H 0.10 -0.26 8.11 -51.93 -0.42 -0.68 16 49 H 0.13 -0.18 7.38 -51.93 -0.38 -0.56 16 LS Contribution 406.44 15.07 6.12 6.12 Total: 0.00 -9.23 406.44 -8.74 -17.97 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -7.22 Total: -12.80 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -0.51 Total: 1.03 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.23 Total: 0.50 kcal Atomic # 8 Polarization: -5.62 SS G_CDS: -1.84 Total: -7.47 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.06 Total: -5.35 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.23 -8.74 -17.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.348 kcal (2) G-P(sol) polarization free energy of solvation -9.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.577 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.967 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds