Wall clock time and date at job start Sun Mar 7 2021 00:16:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34232 * 117.00104 * 2 1 4 4 O 1.20820 * 119.99669 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99716 * 180.02562 * 3 2 1 6 6 N 1.46494 * 112.91274 * 24.95640 * 5 3 2 7 7 C 1.34771 * 120.00156 * 74.99140 * 6 5 3 8 8 O 1.21285 * 120.00306 * 5.07946 * 7 6 5 9 9 C 1.50700 * 120.00260 * 185.07672 * 7 6 5 10 10 C 1.53000 * 109.47346 * 179.97438 * 9 7 6 11 11 O 1.42900 * 109.47276 * 180.02562 * 10 9 7 12 12 C 1.35897 * 117.00015 * 180.02562 * 11 10 9 13 13 C 1.38714 * 120.05711 * 179.97438 * 12 11 10 14 14 C 1.38168 * 119.94423 * 180.02562 * 13 12 11 15 15 C 1.50699 * 119.97114 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47251 * 64.99720 * 15 14 13 17 17 Si 1.86298 * 109.47136 * 185.00263 * 15 14 13 18 18 C 1.38244 * 120.05670 * 0.02562 * 14 13 12 19 19 C 1.38286 * 120.11078 * 359.97330 * 18 14 13 20 20 C 1.38120 * 120.05645 * 359.77478 * 19 18 14 21 21 C 1.53780 * 113.61168 * 253.70289 * 5 3 2 22 22 C 1.53779 * 87.08477 * 270.88534 * 21 5 3 23 23 H 1.09000 * 113.61452 * 89.11413 * 22 21 5 24 24 O 1.42900 * 113.61920 * 220.02065 * 22 21 5 25 25 C 1.42900 * 114.00006 * 247.49664 * 24 22 21 26 26 C 1.53777 * 87.07871 * 334.56977 * 22 21 5 27 27 H 1.08996 * 109.47405 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47196 * 299.99891 * 1 2 3 29 29 H 1.09005 * 109.47250 * 59.99898 * 1 2 3 30 30 H 0.97005 * 120.00068 * 254.99520 * 6 5 3 31 31 H 1.08996 * 109.47316 * 300.00553 * 9 7 6 32 32 H 1.09004 * 109.47014 * 60.00147 * 9 7 6 33 33 H 1.08996 * 109.47416 * 300.00554 * 10 9 7 34 34 H 1.09004 * 109.46893 * 60.00136 * 10 9 7 35 35 H 1.07995 * 120.02783 * 0.02737 * 13 12 11 36 36 H 1.09003 * 109.47227 * 305.00406 * 15 14 13 37 37 H 0.96699 * 114.00503 * 179.97438 * 16 15 14 38 38 H 1.48506 * 109.99865 * 178.68135 * 17 15 14 39 39 H 1.48499 * 109.99832 * 299.99336 * 17 15 14 40 40 H 1.08004 * 119.94190 * 180.02562 * 18 14 13 41 41 H 1.08000 * 119.97162 * 180.02562 * 19 18 14 42 42 H 1.07997 * 120.02784 * 180.27640 * 20 19 18 43 43 H 1.09007 * 113.61732 * 156.34082 * 21 5 3 44 44 H 1.08999 * 113.61954 * 25.43721 * 21 5 3 45 45 H 1.09007 * 109.47145 * 59.99821 * 25 24 22 46 46 H 1.09001 * 109.47293 * 179.97438 * 25 24 22 47 47 H 1.09000 * 109.47276 * 300.00035 * 25 24 22 48 48 H 1.09000 * 113.61521 * 139.97977 * 26 22 21 49 49 H 1.09007 * 113.61312 * 270.87767 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1996 0.0830 -0.5704 7 6 4.1932 -0.1111 -1.9041 8 8 3.7456 0.7435 -2.6392 9 6 4.7422 -1.3900 -2.4821 10 6 4.6160 -1.3562 -4.0065 11 8 5.1361 -2.5691 -4.5545 12 6 5.0994 -2.7008 -5.9066 13 6 5.5880 -3.8523 -6.5060 14 6 5.5501 -3.9835 -7.8809 15 6 6.0802 -5.2346 -8.5327 16 8 5.2749 -6.3504 -8.1475 17 14 6.0271 -5.0402 -10.3848 18 6 5.0262 -2.9681 -8.6592 19 6 4.5385 -1.8191 -8.0640 20 6 4.5693 -1.6853 -6.6897 21 6 4.1613 1.7016 1.3517 22 6 4.0319 3.1534 0.8615 23 1 3.0707 3.6099 1.0975 24 8 5.1424 3.9791 1.2179 25 6 4.8260 5.0020 2.1642 26 6 4.1138 2.5947 -0.5689 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 4.6235 -0.5665 0.0122 31 1 5.7916 -1.4924 -2.2061 32 1 4.1791 -2.2370 -2.0900 33 1 3.5665 -1.2540 -4.2821 34 1 5.1788 -0.5091 -4.3989 35 1 5.9977 -4.6457 -5.8985 36 1 7.1092 -5.4021 -8.2144 37 1 5.5586 -7.1914 -8.5312 38 1 6.5769 -6.2548 -11.0389 39 1 4.6295 -4.8114 -10.8315 40 1 4.9971 -3.0728 -9.7337 41 1 4.1293 -1.0274 -8.6741 42 1 4.1842 -0.7897 -6.2251 43 1 5.1927 1.3798 1.4961 44 1 3.5214 1.4695 2.2031 45 1 4.4566 4.5457 3.0827 46 1 5.7211 5.5843 2.3828 47 1 4.0589 5.6560 1.7495 48 1 3.4355 3.0836 -1.2681 49 1 5.1322 2.5170 -0.9497 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:29 Heat of formation + Delta-G solvation = -162.801223 kcal Electronic energy + Delta-G solvation = -32924.687983 eV Core-core repulsion = 28206.943434 eV Total energy + Delta-G solvation = -4717.744549 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.56943 -41.24644 -40.63219 -39.87252 -38.96952 -37.75742 -37.38494 -37.08487 -34.46754 -33.15258 -32.51611 -30.76898 -29.33928 -27.97618 -27.16443 -27.04037 -26.31317 -24.98170 -23.56982 -23.12137 -21.95779 -21.40108 -20.75628 -19.30683 -19.11302 -18.51668 -18.07367 -17.98090 -17.57983 -17.38942 -17.31333 -17.15605 -17.08711 -16.83154 -16.08696 -15.94220 -15.79447 -15.63173 -15.35414 -15.13528 -14.68502 -14.47547 -14.43605 -14.30916 -14.07707 -13.85639 -13.75406 -13.57471 -13.44199 -13.25705 -13.10939 -12.96332 -12.90770 -12.59272 -12.32689 -12.29908 -12.04785 -11.88916 -11.86969 -11.76866 -11.72326 -11.58404 -11.01400 -10.61771 -10.50697 -10.41428 -9.81922 -9.14929 -4.94028 0.30653 0.51235 0.92920 1.27881 1.29424 1.51252 1.61335 1.64628 1.96891 2.33173 2.71640 2.77481 3.01506 3.16061 3.37427 3.44635 3.47125 3.57674 3.77787 3.82953 3.90001 3.93905 4.01505 4.09328 4.14378 4.18671 4.25825 4.30202 4.31975 4.33531 4.33829 4.42208 4.49278 4.49484 4.52846 4.59212 4.61904 4.65245 4.74248 4.75850 4.77397 4.91178 5.06425 5.09493 5.26701 5.35115 5.47542 5.56148 5.76377 6.12258 6.17674 6.44374 6.44853 6.57877 6.96981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.350 6.350 3 C 0.478 3.522 4 O -0.492 6.492 5 C 0.153 3.847 6 N -0.707 5.707 7 C 0.526 3.474 8 O -0.527 6.527 9 C -0.139 4.139 10 C 0.074 3.926 11 O -0.316 6.316 12 C 0.132 3.868 13 C -0.124 4.124 14 C -0.036 4.036 15 C -0.077 4.077 16 O -0.535 6.535 17 Si 0.688 3.312 18 C -0.153 4.153 19 C -0.073 4.073 20 C -0.202 4.202 21 C -0.140 4.140 22 C 0.063 3.937 23 H 0.104 0.896 24 O -0.371 6.371 25 C 0.027 3.973 26 C -0.103 4.103 27 H 0.105 0.895 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.412 0.588 31 H 0.110 0.890 32 H 0.111 0.889 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.132 0.868 36 H 0.078 0.922 37 H 0.380 0.620 38 H -0.261 1.261 39 H -0.255 1.255 40 H 0.129 0.871 41 H 0.131 0.869 42 H 0.133 0.867 43 H 0.119 0.881 44 H 0.086 0.914 45 H 0.043 0.957 46 H 0.089 0.911 47 H 0.046 0.954 48 H 0.094 0.906 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.923 -1.010 2.951 4.274 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.318 3.682 4 O -0.378 6.378 5 C 0.064 3.936 6 N -0.362 5.362 7 C 0.312 3.688 8 O -0.402 6.402 9 C -0.179 4.179 10 C -0.001 4.001 11 O -0.230 6.230 12 C 0.087 3.913 13 C -0.143 4.143 14 C -0.036 4.036 15 C -0.187 4.187 16 O -0.342 6.342 17 Si 0.589 3.411 18 C -0.170 4.170 19 C -0.091 4.091 20 C -0.220 4.220 21 C -0.178 4.178 22 C 0.004 3.996 23 H 0.122 0.878 24 O -0.289 6.289 25 C -0.069 4.069 26 C -0.141 4.141 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.084 0.916 30 H 0.248 0.752 31 H 0.128 0.872 32 H 0.129 0.871 33 H 0.090 0.910 34 H 0.092 0.908 35 H 0.150 0.850 36 H 0.096 0.904 37 H 0.228 0.772 38 H -0.187 1.187 39 H -0.180 1.180 40 H 0.146 0.854 41 H 0.149 0.851 42 H 0.150 0.850 43 H 0.137 0.863 44 H 0.105 0.895 45 H 0.062 0.938 46 H 0.108 0.892 47 H 0.064 0.936 48 H 0.112 0.888 49 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 1.955 -0.103 2.065 2.845 hybrid contribution -0.681 -1.285 0.895 1.708 sum 1.273 -1.388 2.960 3.508 Atomic orbital electron populations 1.23368 0.75595 1.04175 1.02865 1.86496 1.23875 1.32703 1.83497 1.23241 0.90692 0.81897 0.72386 1.90696 1.66063 1.36364 1.44678 1.21026 0.85562 0.88062 0.98929 1.45675 1.58723 1.24455 1.07359 1.20401 0.78181 0.88238 0.81942 1.90778 1.45761 1.44774 1.58883 1.21445 1.04752 0.96586 0.95118 1.22407 0.99959 0.85651 0.92111 1.85964 1.78727 1.39891 1.18391 1.18910 0.95949 0.94444 0.82008 1.20209 1.03740 0.96522 0.93806 1.18995 0.98019 0.93794 0.92814 1.24838 0.96208 0.86463 1.11173 1.86601 1.56835 1.17835 1.72947 0.94912 0.84630 0.87481 0.74093 1.20911 1.01925 0.94715 0.99498 1.20900 0.97053 0.97162 0.93983 1.21383 1.05732 0.99973 0.94961 1.23850 1.03250 0.96983 0.93692 1.23655 0.91246 0.89408 0.95257 0.87776 1.87940 1.33375 1.45496 1.62078 1.22872 1.02076 0.90343 0.91622 1.23408 1.03331 0.90538 0.96869 0.87682 0.91576 0.91604 0.75204 0.87176 0.87118 0.90976 0.90772 0.84987 0.90398 0.77217 1.18677 1.17984 0.85408 0.85086 0.84956 0.86315 0.89536 0.93787 0.89226 0.93564 0.88765 0.87153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.59 10.29 -39.26 -0.40 -0.99 16 3 C 0.48 1.24 7.00 36.01 0.25 1.49 16 4 O -0.49 -2.39 14.98 -18.75 -0.28 -2.67 16 5 C 0.15 0.04 1.15 -132.16 -0.15 -0.11 16 6 N -0.71 1.12 4.99 -47.93 -0.24 0.88 16 7 C 0.53 0.14 7.55 -10.99 -0.08 0.06 16 8 O -0.53 -2.12 14.91 5.55 0.08 -2.04 16 9 C -0.14 0.26 6.07 -27.88 -0.17 0.09 16 10 C 0.07 0.03 4.03 37.16 0.15 0.18 16 11 O -0.32 -0.69 10.14 -19.42 -0.20 -0.88 16 12 C 0.13 0.38 6.69 -39.21 -0.26 0.11 16 13 C -0.12 -0.36 9.62 -39.43 -0.38 -0.74 16 14 C -0.04 -0.08 5.38 -104.65 -0.56 -0.64 16 15 C -0.08 -0.04 2.79 36.00 0.10 0.06 16 16 O -0.53 -0.95 12.81 -35.23 -0.45 -1.40 16 17 Si 0.69 -0.34 29.85 -169.99 -5.07 -5.42 16 18 C -0.15 -0.22 8.67 -39.56 -0.34 -0.57 16 19 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 20 C -0.20 -0.39 9.04 -39.43 -0.36 -0.75 16 21 C -0.14 0.22 7.24 -25.92 -0.19 0.03 16 22 C 0.06 0.03 3.90 -25.92 -0.10 -0.07 16 23 H 0.10 0.10 7.04 -51.93 -0.37 -0.27 16 24 O -0.37 -0.53 10.71 -35.23 -0.38 -0.91 16 25 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 26 C -0.10 -0.15 5.59 -25.92 -0.15 -0.29 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 30 H 0.41 -1.94 8.76 -40.82 -0.36 -2.30 16 31 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 32 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 33 H 0.07 0.08 7.61 -51.93 -0.40 -0.32 16 34 H 0.07 0.04 7.63 -51.93 -0.40 -0.36 16 35 H 0.13 0.31 8.06 -52.49 -0.42 -0.11 16 36 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.38 -0.90 8.74 45.56 0.40 -0.51 16 38 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 39 H -0.26 -0.67 7.05 56.52 0.40 -0.27 16 40 H 0.13 -0.04 4.86 -52.48 -0.26 -0.29 16 41 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.13 0.11 6.30 -52.49 -0.33 -0.22 16 43 H 0.12 -0.35 8.14 -51.92 -0.42 -0.77 16 44 H 0.09 -0.20 8.09 -51.93 -0.42 -0.62 16 45 H 0.04 -0.08 8.14 -51.92 -0.42 -0.50 16 46 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 48 H 0.09 0.31 7.85 -51.93 -0.41 -0.10 16 49 H 0.11 0.14 8.14 -51.92 -0.42 -0.28 16 LS Contribution 411.37 15.07 6.20 6.20 Total: 0.00 -10.43 411.37 -8.43 -18.87 By element: Atomic # 1 Polarization: -4.91 SS G_CDS: -7.22 Total: -12.12 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -0.47 Total: 0.50 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -0.24 Total: 0.88 kcal Atomic # 8 Polarization: -7.28 SS G_CDS: -1.63 Total: -8.90 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.07 Total: -5.42 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.43 -8.43 -18.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.935 kcal (2) G-P(sol) polarization free energy of solvation -10.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds