Wall clock time and date at job start Sun Mar 7 2021 00:16:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34232 * 117.00104 * 2 1 4 4 O 1.20820 * 119.99669 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99716 * 180.02562 * 3 2 1 6 6 N 1.46494 * 112.91274 * 24.95640 * 5 3 2 7 7 C 1.34771 * 120.00156 * 74.99140 * 6 5 3 8 8 O 1.21285 * 120.00306 * 5.07946 * 7 6 5 9 9 C 1.50700 * 120.00260 * 185.07672 * 7 6 5 10 10 C 1.53000 * 109.47346 * 179.97438 * 9 7 6 11 11 O 1.42900 * 109.47276 * 180.02562 * 10 9 7 12 12 C 1.35897 * 117.00015 * 180.02562 * 11 10 9 13 13 C 1.38714 * 120.05711 * 179.97438 * 12 11 10 14 14 C 1.38168 * 119.94423 * 180.02562 * 13 12 11 15 15 C 1.50699 * 119.97114 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47251 * 64.99720 * 15 14 13 17 17 Si 1.86298 * 109.47136 * 185.00263 * 15 14 13 18 18 C 1.38244 * 120.05670 * 0.02562 * 14 13 12 19 19 C 1.38286 * 120.11078 * 359.97330 * 18 14 13 20 20 C 1.38120 * 120.05645 * 359.77478 * 19 18 14 21 21 C 1.53780 * 113.61168 * 253.70289 * 5 3 2 22 22 C 1.53779 * 87.08477 * 270.88534 * 21 5 3 23 23 H 1.09000 * 113.61452 * 89.11413 * 22 21 5 24 24 O 1.42900 * 113.61920 * 220.02065 * 22 21 5 25 25 C 1.42900 * 114.00006 * 247.49664 * 24 22 21 26 26 C 1.53777 * 87.07871 * 334.56977 * 22 21 5 27 27 H 1.08996 * 109.47405 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47196 * 299.99891 * 1 2 3 29 29 H 1.09005 * 109.47250 * 59.99898 * 1 2 3 30 30 H 0.97005 * 120.00068 * 254.99520 * 6 5 3 31 31 H 1.08996 * 109.47316 * 300.00553 * 9 7 6 32 32 H 1.09004 * 109.47014 * 60.00147 * 9 7 6 33 33 H 1.08996 * 109.47416 * 300.00554 * 10 9 7 34 34 H 1.09004 * 109.46893 * 60.00136 * 10 9 7 35 35 H 1.07995 * 120.02783 * 0.02737 * 13 12 11 36 36 H 1.09003 * 109.47227 * 305.00406 * 15 14 13 37 37 H 0.96699 * 114.00503 * 179.97438 * 16 15 14 38 38 H 1.48506 * 109.99865 * 178.68135 * 17 15 14 39 39 H 1.48499 * 109.99832 * 299.99336 * 17 15 14 40 40 H 1.08004 * 119.94190 * 180.02562 * 18 14 13 41 41 H 1.08000 * 119.97162 * 180.02562 * 19 18 14 42 42 H 1.07997 * 120.02784 * 180.27640 * 20 19 18 43 43 H 1.09007 * 113.61732 * 156.34082 * 21 5 3 44 44 H 1.08999 * 113.61954 * 25.43721 * 21 5 3 45 45 H 1.09007 * 109.47145 * 59.99821 * 25 24 22 46 46 H 1.09001 * 109.47293 * 179.97438 * 25 24 22 47 47 H 1.09000 * 109.47276 * 300.00035 * 25 24 22 48 48 H 1.09000 * 113.61521 * 139.97977 * 26 22 21 49 49 H 1.09007 * 113.61312 * 270.87767 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1996 0.0830 -0.5704 7 6 4.1932 -0.1111 -1.9041 8 8 3.7456 0.7435 -2.6392 9 6 4.7422 -1.3900 -2.4821 10 6 4.6160 -1.3562 -4.0065 11 8 5.1361 -2.5691 -4.5545 12 6 5.0994 -2.7008 -5.9066 13 6 5.5880 -3.8523 -6.5060 14 6 5.5501 -3.9835 -7.8809 15 6 6.0802 -5.2346 -8.5327 16 8 5.2749 -6.3504 -8.1475 17 14 6.0271 -5.0402 -10.3848 18 6 5.0262 -2.9681 -8.6592 19 6 4.5385 -1.8191 -8.0640 20 6 4.5693 -1.6853 -6.6897 21 6 4.1613 1.7016 1.3517 22 6 4.0319 3.1534 0.8615 23 1 3.0707 3.6099 1.0975 24 8 5.1424 3.9791 1.2179 25 6 4.8260 5.0020 2.1642 26 6 4.1138 2.5947 -0.5689 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 4.6235 -0.5665 0.0122 31 1 5.7916 -1.4924 -2.2061 32 1 4.1791 -2.2370 -2.0900 33 1 3.5665 -1.2540 -4.2821 34 1 5.1788 -0.5091 -4.3989 35 1 5.9977 -4.6457 -5.8985 36 1 7.1092 -5.4021 -8.2144 37 1 5.5586 -7.1914 -8.5312 38 1 6.5769 -6.2548 -11.0389 39 1 4.6295 -4.8114 -10.8315 40 1 4.9971 -3.0728 -9.7337 41 1 4.1293 -1.0274 -8.6741 42 1 4.1842 -0.7897 -6.2251 43 1 5.1927 1.3798 1.4961 44 1 3.5214 1.4695 2.2031 45 1 4.4566 4.5457 3.0827 46 1 5.7211 5.5843 2.3828 47 1 4.0589 5.6560 1.7495 48 1 3.4355 3.0836 -1.2681 49 1 5.1322 2.5170 -0.9497 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:27 Heat of formation + Delta-G solvation = -165.040009 kcal Electronic energy + Delta-G solvation = -32924.785064 eV Core-core repulsion = 28206.943434 eV Total energy + Delta-G solvation = -4717.841630 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.65724 -41.34378 -40.73506 -39.92434 -39.05043 -37.86207 -37.46094 -37.19680 -34.50249 -33.14407 -32.61108 -30.85426 -29.37906 -27.93995 -27.16731 -27.08804 -26.34105 -25.02531 -23.67385 -23.19308 -22.02461 -21.41046 -20.84599 -19.35991 -19.18730 -18.56959 -18.18793 -18.03787 -17.62426 -17.43008 -17.40992 -17.23667 -17.14870 -16.88825 -16.10034 -15.98556 -15.86124 -15.68037 -15.39511 -15.16546 -14.72277 -14.55891 -14.52255 -14.37866 -14.12102 -13.92023 -13.75452 -13.61284 -13.50487 -13.29377 -13.12052 -12.96810 -12.93934 -12.57014 -12.41564 -12.34948 -12.07694 -11.99274 -11.98261 -11.82817 -11.80714 -11.67172 -11.08835 -10.61953 -10.53686 -10.44721 -9.93177 -9.27893 -4.91044 0.18670 0.38466 0.77022 1.25297 1.28141 1.49983 1.60890 1.63051 1.94905 2.30248 2.61515 2.78005 3.03219 3.14541 3.38255 3.41729 3.47199 3.57329 3.75855 3.83720 3.89592 3.92498 4.01742 4.09748 4.14609 4.18862 4.22233 4.25071 4.35218 4.39503 4.45486 4.48527 4.51958 4.53521 4.58237 4.62457 4.65419 4.68278 4.73733 4.76579 4.78892 4.85851 4.96943 5.09701 5.17595 5.23958 5.36792 5.44726 5.68264 6.12898 6.27978 6.34179 6.43592 6.58747 7.02748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.352 6.352 3 C 0.473 3.527 4 O -0.523 6.523 5 C 0.153 3.847 6 N -0.692 5.692 7 C 0.525 3.475 8 O -0.570 6.570 9 C -0.129 4.129 10 C 0.073 3.927 11 O -0.321 6.321 12 C 0.118 3.882 13 C -0.140 4.140 14 C -0.047 4.047 15 C -0.089 4.089 16 O -0.558 6.558 17 Si 0.770 3.230 18 C -0.161 4.161 19 C -0.076 4.076 20 C -0.211 4.211 21 C -0.121 4.121 22 C 0.061 3.939 23 H 0.095 0.905 24 O -0.387 6.387 25 C 0.021 3.979 26 C -0.107 4.107 27 H 0.132 0.868 28 H 0.069 0.931 29 H 0.054 0.946 30 H 0.430 0.570 31 H 0.135 0.865 32 H 0.128 0.872 33 H 0.060 0.940 34 H 0.069 0.931 35 H 0.131 0.869 36 H 0.097 0.903 37 H 0.396 0.604 38 H -0.284 1.284 39 H -0.299 1.299 40 H 0.143 0.857 41 H 0.152 0.848 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.100 0.900 45 H 0.055 0.945 46 H 0.099 0.901 47 H 0.044 0.956 48 H 0.065 0.935 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.940 -2.026 3.769 5.817 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.267 6.267 3 C 0.315 3.685 4 O -0.411 6.411 5 C 0.064 3.936 6 N -0.347 5.347 7 C 0.313 3.687 8 O -0.448 6.448 9 C -0.168 4.168 10 C -0.002 4.002 11 O -0.235 6.235 12 C 0.073 3.927 13 C -0.159 4.159 14 C -0.047 4.047 15 C -0.197 4.197 16 O -0.369 6.369 17 Si 0.675 3.325 18 C -0.178 4.178 19 C -0.094 4.094 20 C -0.230 4.230 21 C -0.158 4.158 22 C 0.002 3.998 23 H 0.113 0.887 24 O -0.306 6.306 25 C -0.075 4.075 26 C -0.145 4.145 27 H 0.150 0.850 28 H 0.088 0.912 29 H 0.072 0.928 30 H 0.270 0.730 31 H 0.153 0.847 32 H 0.146 0.854 33 H 0.079 0.921 34 H 0.087 0.913 35 H 0.149 0.851 36 H 0.115 0.885 37 H 0.246 0.754 38 H -0.211 1.211 39 H -0.226 1.226 40 H 0.160 0.840 41 H 0.170 0.830 42 H 0.155 0.845 43 H 0.158 0.842 44 H 0.119 0.881 45 H 0.074 0.926 46 H 0.118 0.882 47 H 0.063 0.937 48 H 0.084 0.916 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 3.008 -1.159 2.930 4.356 hybrid contribution -1.068 -0.972 0.614 1.569 sum 1.941 -2.131 3.544 4.568 Atomic orbital electron populations 1.23580 0.74669 1.05857 1.02503 1.86491 1.24891 1.32204 1.83123 1.23729 0.91603 0.81700 0.71470 1.90678 1.66933 1.37321 1.46177 1.20942 0.84465 0.88139 1.00076 1.45533 1.57922 1.24201 1.07088 1.20779 0.77429 0.88339 0.82169 1.90772 1.47761 1.46310 1.59998 1.21415 1.06419 0.95769 0.93241 1.22445 0.99123 0.85019 0.93649 1.85943 1.78839 1.40550 1.18189 1.19101 0.96370 0.94809 0.82435 1.20339 1.04494 0.96704 0.94341 1.19283 0.97964 0.94674 0.92802 1.25089 0.96930 0.85655 1.12031 1.86552 1.57613 1.19015 1.73672 0.93974 0.81168 0.85588 0.71729 1.21157 1.01692 0.94667 1.00301 1.21214 0.96525 0.97701 0.93965 1.21542 1.05887 1.00098 0.95441 1.23812 1.04491 0.94682 0.92835 1.23630 0.90737 0.90619 0.94825 0.88725 1.87906 1.33768 1.46107 1.62773 1.23016 1.02649 0.90123 0.91663 1.23362 1.02623 0.91530 0.96996 0.84984 0.91216 0.92753 0.73035 0.84692 0.85400 0.92120 0.91256 0.85076 0.88472 0.75377 1.21055 1.22645 0.83960 0.82985 0.84451 0.84226 0.88136 0.92616 0.88228 0.93746 0.91589 0.87134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.19 16 2 O -0.35 -1.24 10.29 -51.44 -0.53 -1.77 16 3 C 0.47 2.85 7.00 71.24 0.50 3.35 16 4 O -0.52 -6.04 14.98 21.98 0.33 -5.71 16 5 C 0.15 0.11 1.15 3.38 0.00 0.11 16 6 N -0.69 2.66 4.99 -423.94 -2.11 0.55 16 7 C 0.52 0.32 7.55 87.66 0.66 0.98 16 8 O -0.57 -5.44 14.91 -3.05 -0.05 -5.49 16 9 C -0.13 0.57 6.07 29.85 0.18 0.75 16 10 C 0.07 0.11 4.03 71.98 0.29 0.40 16 11 O -0.32 -1.57 10.14 -92.39 -0.94 -2.51 16 12 C 0.12 0.78 6.69 22.51 0.15 0.93 16 13 C -0.14 -0.92 9.62 22.37 0.22 -0.70 16 14 C -0.05 -0.22 5.38 -19.88 -0.11 -0.33 16 15 C -0.09 -0.08 2.79 71.24 0.20 0.12 16 16 O -0.56 -2.02 12.81 -148.98 -1.91 -3.93 16 17 Si 0.77 -1.00 29.85 68.60 2.05 1.04 16 18 C -0.16 -0.48 8.67 22.28 0.19 -0.29 16 19 C -0.08 -0.20 10.04 22.25 0.22 0.02 16 20 C -0.21 -1.00 9.04 22.37 0.20 -0.80 16 21 C -0.12 0.49 7.24 31.12 0.23 0.71 16 22 C 0.06 0.11 3.90 31.12 0.12 0.23 16 23 H 0.09 0.32 7.04 -2.39 -0.02 0.31 16 24 O -0.39 -1.20 10.71 -148.98 -1.60 -2.79 16 25 C 0.02 -0.03 10.85 113.37 1.23 1.20 16 26 C -0.11 -0.45 5.59 31.12 0.17 -0.28 16 27 H 0.13 -0.81 8.14 -2.39 -0.02 -0.83 16 28 H 0.07 -0.07 8.13 -2.39 -0.02 -0.09 16 29 H 0.05 0.12 8.13 -2.38 -0.02 0.10 16 30 H 0.43 -4.88 8.76 -92.70 -0.81 -5.69 16 31 H 0.14 -1.23 8.14 -2.39 -0.02 -1.25 16 32 H 0.13 -0.96 8.14 -2.38 -0.02 -0.98 16 33 H 0.06 0.22 7.61 -2.39 -0.02 0.20 16 34 H 0.07 0.16 7.63 -2.38 -0.02 0.14 16 35 H 0.13 0.75 8.06 -2.91 -0.02 0.72 16 36 H 0.10 -0.32 7.96 -2.39 -0.02 -0.34 16 37 H 0.40 -1.94 8.74 -74.06 -0.65 -2.59 16 38 H -0.28 -0.65 7.11 99.48 0.71 0.06 16 39 H -0.30 -1.77 7.05 99.48 0.70 -1.07 16 40 H 0.14 -0.12 4.86 -2.91 -0.01 -0.13 16 41 H 0.15 -0.36 8.06 -2.91 -0.02 -0.39 16 42 H 0.14 0.40 6.30 -2.91 -0.02 0.38 16 43 H 0.14 -1.12 8.14 -2.38 -0.02 -1.14 16 44 H 0.10 -0.63 8.09 -2.39 -0.02 -0.65 16 45 H 0.06 -0.22 8.14 -2.38 -0.02 -0.24 16 46 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 47 H 0.04 -0.06 8.14 -2.39 -0.02 -0.08 16 48 H 0.07 0.64 7.85 -2.39 -0.02 0.63 16 49 H 0.11 0.41 8.14 -2.38 -0.02 0.40 16 Total: 0.00 -26.40 411.37 0.47 -25.93 By element: Atomic # 1 Polarization: -12.49 SS G_CDS: -0.44 Total: -12.93 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: 5.66 Total: 7.60 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -2.11 Total: 0.55 kcal Atomic # 8 Polarization: -17.51 SS G_CDS: -4.69 Total: -22.19 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.05 Total: 1.04 kcal Total: -26.40 0.47 -25.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.110 kcal (2) G-P(sol) polarization free energy of solvation -26.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds