Wall clock time and date at job start Sun Mar 7 2021 00:16:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34231 * 116.99772 * 2 1 4 4 O 1.20825 * 119.99960 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99778 * 179.97438 * 3 2 1 6 6 N 1.46500 * 112.85129 * 35.07375 * 5 3 2 7 7 C 1.34774 * 119.99612 * 74.56114 * 6 5 3 8 8 O 1.21285 * 120.00192 * 355.30552 * 7 6 5 9 9 C 1.50701 * 120.00106 * 175.30735 * 7 6 5 10 10 O 1.42900 * 109.47300 * 179.97438 * 9 7 6 11 11 C 1.35998 * 116.99760 * 179.97438 * 10 9 7 12 12 C 1.39151 * 120.06897 * 179.97438 * 11 10 9 13 13 O 1.35994 * 120.07605 * 359.96122 * 12 11 10 14 14 C 1.42907 * 117.00105 * 179.97438 * 13 12 11 15 15 C 1.38565 * 119.85075 * 179.97438 * 12 11 10 16 16 C 1.38238 * 120.00290 * 0.02562 * 15 12 11 17 17 C 1.50702 * 119.92782 * 179.97438 * 16 15 12 18 18 O 1.42902 * 109.46817 * 254.99278 * 17 16 15 19 19 Si 1.86294 * 109.47139 * 14.99649 * 17 16 15 20 20 C 1.38253 * 120.14539 * 359.97438 * 16 15 12 21 21 N 1.48005 * 119.93068 * 180.02562 * 20 16 15 22 22 O 1.21800 * 120.00231 * 180.02562 * 21 20 16 23 23 O 1.21806 * 119.99488 * 0.02562 * 21 20 16 24 24 C 1.38242 * 120.14577 * 359.75141 * 20 16 15 25 25 C 1.53780 * 113.69036 * 263.80485 * 5 3 2 26 26 C 1.53778 * 87.08279 * 220.01022 * 25 5 3 27 27 H 1.08998 * 113.61952 * 139.98565 * 26 25 5 28 28 O 1.42900 * 113.61588 * 270.88538 * 26 25 5 29 29 C 1.42899 * 114.00272 * 247.49465 * 28 26 25 30 30 C 1.53780 * 87.07954 * 25.43409 * 26 25 5 31 31 H 1.09010 * 109.47134 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47125 * 299.99574 * 1 2 3 33 33 H 1.08994 * 109.47279 * 59.99859 * 1 2 3 34 34 H 0.96994 * 120.00318 * 254.84117 * 6 5 3 35 35 H 1.09002 * 109.47156 * 300.00092 * 9 7 6 36 36 H 1.08998 * 109.47194 * 59.99860 * 9 7 6 37 37 H 1.09001 * 109.47153 * 59.99659 * 14 13 12 38 38 H 1.08997 * 109.46877 * 179.97438 * 14 13 12 39 39 H 1.08993 * 109.46571 * 299.99688 * 14 13 12 40 40 H 1.08002 * 119.99803 * 180.02562 * 15 12 11 41 41 H 1.09006 * 109.46682 * 134.99747 * 17 16 15 42 42 H 0.96703 * 113.99840 * 180.02562 * 18 17 16 43 43 H 1.48498 * 109.99953 * 299.99880 * 19 17 16 44 44 H 1.48496 * 110.00153 * 61.32061 * 19 17 16 45 45 H 1.07999 * 120.00359 * 180.27717 * 24 20 16 46 46 H 1.09000 * 113.61466 * 334.56020 * 25 5 3 47 47 H 1.09001 * 113.61121 * 105.46077 * 25 5 3 48 48 H 1.09003 * 109.46669 * 59.99908 * 29 28 26 49 49 H 1.09004 * 109.47152 * 179.97438 * 29 28 26 50 50 H 1.08991 * 109.47142 * 300.00378 * 29 28 26 51 51 H 1.09001 * 113.61359 * 220.02164 * 30 26 25 52 52 H 1.08997 * 113.61586 * 89.11892 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1925 0.2012 -0.7747 7 6 4.1664 0.2391 -2.1217 8 8 3.5519 1.1157 -2.6918 9 6 4.9005 -0.8076 -2.9194 10 8 4.7229 -0.5547 -4.3146 11 6 5.3260 -1.4137 -5.1794 12 6 5.1947 -1.2277 -6.5522 13 8 4.4624 -0.1870 -7.0320 14 6 4.3718 -0.0577 -8.4523 15 6 5.8116 -2.1053 -7.4292 16 6 6.5549 -3.1632 -6.9400 17 6 7.2246 -4.1170 -7.8954 18 8 6.4986 -5.3475 -7.9271 19 14 7.2538 -3.3690 -9.6013 20 6 6.6853 -3.3480 -5.5761 21 7 7.4828 -4.4818 -5.0574 22 8 7.5982 -4.6462 -3.8561 23 8 8.0237 -5.2506 -5.8321 24 6 6.0772 -2.4728 -4.6956 25 6 4.1748 1.4593 1.4008 26 6 5.1710 2.4355 0.7533 27 1 5.3782 3.3157 1.3619 28 8 6.3571 1.8042 0.2668 29 6 7.5409 2.1597 0.9839 30 6 4.1099 2.6740 -0.3338 31 1 -0.3634 -1.0278 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 -0.3633 0.5138 -0.8899 34 1 4.6225 -0.5391 -0.3187 35 1 5.9623 -0.7719 -2.6756 36 1 4.5048 -1.7937 -2.6761 37 1 3.9149 -0.9547 -8.8703 38 1 3.7605 0.8101 -8.6998 39 1 5.3704 0.0697 -8.8699 40 1 5.7116 -1.9629 -8.4952 41 1 8.2457 -4.3060 -7.5640 42 1 6.8740 -6.0104 -8.5226 43 1 5.8675 -3.1065 -10.0645 44 1 8.0329 -2.1049 -9.5883 45 1 6.1843 -2.6167 -3.6306 46 1 3.4983 1.9334 2.1119 47 1 4.6417 0.5572 1.7961 48 1 7.4310 1.8750 2.0303 49 1 8.3965 1.6389 0.5539 50 1 7.6980 3.2361 0.9149 51 1 4.5244 2.7526 -1.3389 52 1 3.4157 3.4803 -0.0970 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:51 Heat of formation + Delta-G solvation = -176.434802 kcal Electronic energy + Delta-G solvation = -43772.256395 eV Core-core repulsion = 37904.222022 eV Total energy + Delta-G solvation = -5868.034373 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.159 amu Computer time = 1.88 seconds Orbital eigenvalues (eV) -43.45782 -42.62844 -42.17653 -40.96703 -40.27445 -39.51341 -39.10754 -37.81654 -37.78187 -37.15723 -37.02786 -34.44986 -32.86582 -32.66804 -30.26266 -29.29071 -28.92232 -27.97491 -27.73743 -27.14107 -26.42983 -25.75291 -24.09893 -23.22376 -22.83258 -22.09975 -20.87649 -20.55435 -19.94247 -19.60187 -19.34921 -18.89097 -18.82196 -18.32085 -18.27441 -18.08025 -17.84786 -17.80785 -17.44824 -17.28359 -16.98684 -16.88240 -16.57099 -16.10300 -16.05820 -15.75591 -15.61919 -15.47044 -15.16653 -14.84700 -14.77159 -14.44384 -14.32504 -14.14340 -13.96274 -13.78408 -13.58977 -13.50942 -13.39909 -13.06729 -13.02726 -12.71943 -12.68915 -12.59822 -12.54168 -12.44239 -12.40048 -12.22387 -12.20680 -12.08283 -11.96726 -11.91999 -11.73812 -11.14266 -10.66808 -10.63761 -10.39086 -10.23708 -9.62649 -5.00984 -1.39890 -0.57847 0.11113 0.22995 0.78629 1.07948 1.14991 1.20818 1.57206 1.62945 1.69609 1.76719 1.80607 2.11635 2.56272 2.81291 3.01308 3.05268 3.17124 3.18944 3.30913 3.35988 3.44940 3.66091 3.72465 3.76393 3.79095 3.88306 3.91501 3.98109 4.05526 4.10167 4.13166 4.17339 4.17510 4.21776 4.40658 4.48571 4.48708 4.51810 4.56656 4.57199 4.58843 4.59836 4.67116 4.72900 4.80907 4.92142 5.10560 5.16939 5.23304 5.41793 5.87334 6.18293 6.21857 6.47970 6.50918 6.84669 6.92031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.356 6.356 3 C 0.464 3.536 4 O -0.529 6.529 5 C 0.157 3.843 6 N -0.672 5.672 7 C 0.523 3.477 8 O -0.557 6.557 9 C 0.031 3.969 10 O -0.290 6.290 11 C 0.103 3.897 12 C 0.162 3.838 13 O -0.306 6.306 14 C 0.004 3.996 15 C -0.187 4.187 16 C -0.004 4.004 17 C -0.100 4.100 18 O -0.553 6.553 19 Si 0.778 3.222 20 C -0.042 4.042 21 N 0.037 4.963 22 O -0.191 6.191 23 O -0.139 6.139 24 C -0.106 4.106 25 C -0.126 4.126 26 C 0.076 3.924 27 H 0.110 0.890 28 O -0.379 6.379 29 C 0.024 3.976 30 C -0.132 4.132 31 H 0.131 0.869 32 H 0.069 0.931 33 H 0.049 0.951 34 H 0.429 0.571 35 H 0.134 0.866 36 H 0.131 0.869 37 H 0.073 0.927 38 H 0.130 0.870 39 H 0.073 0.927 40 H 0.169 0.831 41 H 0.102 0.898 42 H 0.408 0.592 43 H -0.269 1.269 44 H -0.277 1.277 45 H 0.191 0.809 46 H 0.124 0.876 47 H 0.122 0.878 48 H 0.059 0.941 49 H 0.094 0.906 50 H 0.046 0.954 51 H 0.072 0.928 52 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.261 -1.973 0.560 4.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.272 6.272 3 C 0.306 3.694 4 O -0.417 6.417 5 C 0.067 3.933 6 N -0.328 5.328 7 C 0.310 3.690 8 O -0.434 6.434 9 C -0.047 4.047 10 O -0.203 6.203 11 C 0.056 3.944 12 C 0.114 3.886 13 O -0.218 6.218 14 C -0.089 4.089 15 C -0.206 4.206 16 C -0.006 4.006 17 C -0.208 4.208 18 O -0.363 6.363 19 Si 0.680 3.320 20 C -0.126 4.126 21 N 0.553 4.447 22 O -0.398 6.398 23 O -0.360 6.360 24 C -0.125 4.125 25 C -0.163 4.163 26 C 0.017 3.983 27 H 0.128 0.872 28 O -0.297 6.297 29 C -0.072 4.072 30 C -0.170 4.170 31 H 0.149 0.851 32 H 0.088 0.912 33 H 0.068 0.932 34 H 0.270 0.730 35 H 0.151 0.849 36 H 0.149 0.851 37 H 0.091 0.909 38 H 0.148 0.852 39 H 0.092 0.908 40 H 0.186 0.814 41 H 0.119 0.881 42 H 0.261 0.739 43 H -0.196 1.196 44 H -0.203 1.203 45 H 0.208 0.792 46 H 0.142 0.858 47 H 0.140 0.860 48 H 0.078 0.922 49 H 0.112 0.888 50 H 0.064 0.936 51 H 0.090 0.910 52 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 2.406 0.684 -0.184 2.508 hybrid contribution -0.096 -0.366 0.867 0.946 sum 2.310 0.318 0.682 2.429 Atomic orbital electron populations 1.23538 0.75125 1.05703 1.02285 1.86508 1.24675 1.32765 1.83230 1.24419 0.92446 0.81464 0.71091 1.90660 1.67176 1.37477 1.46412 1.21290 0.83015 0.91106 0.97871 1.45008 1.57882 1.25589 1.04359 1.20336 0.80223 0.85680 0.82810 1.90805 1.43299 1.38292 1.70982 1.22873 1.03775 0.99607 0.78419 1.86292 1.69018 1.48723 1.16240 1.17875 0.97173 0.91789 0.87541 1.18665 0.91421 0.88345 0.90190 1.86315 1.65172 1.43261 1.27006 1.23667 1.04090 1.05316 0.75864 1.21040 1.02129 0.96530 1.00858 1.19322 0.94413 0.95309 0.91563 1.25226 0.97905 0.89078 1.08596 1.86387 1.54266 1.24604 1.71073 0.93552 0.79679 0.81227 0.77564 1.20527 1.05541 0.92825 0.93718 1.43427 0.99384 1.01266 1.00631 1.94525 1.67255 1.79450 0.98592 1.94477 1.46894 1.40318 1.54265 1.20971 0.96307 0.92365 1.02891 1.23831 0.97886 1.03176 0.91416 1.22950 0.84980 0.96004 0.94322 0.87239 1.87878 1.15402 1.68699 1.57736 1.23013 0.86526 1.00500 0.97126 1.23580 0.97806 0.94209 1.01410 0.85051 0.91213 0.93200 0.73043 0.84878 0.85144 0.90891 0.85198 0.90820 0.81412 0.88065 0.73947 1.19575 1.20323 0.79185 0.85783 0.86005 0.92188 0.88750 0.93574 0.90969 0.86989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 113.37 1.20 1.25 16 2 O -0.36 -2.09 10.41 -51.42 -0.54 -2.63 16 3 C 0.46 3.85 6.89 71.24 0.49 4.34 16 4 O -0.53 -7.61 15.66 21.97 0.34 -7.27 16 5 C 0.16 0.33 1.01 3.38 0.00 0.33 16 6 N -0.67 0.59 4.49 -423.92 -1.90 -1.32 16 7 C 0.52 2.67 7.41 87.66 0.65 3.32 16 8 O -0.56 -8.94 14.91 15.99 0.24 -8.70 16 9 C 0.03 -0.03 5.22 71.24 0.37 0.34 16 10 O -0.29 -2.09 9.45 -67.12 -0.63 -2.72 16 11 C 0.10 0.54 6.70 22.57 0.15 0.69 16 12 C 0.16 0.94 6.70 22.57 0.15 1.09 16 13 O -0.31 -2.01 10.28 -79.62 -0.82 -2.83 16 14 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 15 C -0.19 -0.62 7.65 22.35 0.17 -0.45 16 16 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 17 C -0.10 -0.02 1.73 71.24 0.12 0.10 16 18 O -0.55 -0.37 11.78 -129.64 -1.53 -1.90 16 19 Si 0.78 -3.79 30.19 68.60 2.07 -1.72 16 20 C -0.04 -0.26 6.85 36.38 0.25 -0.01 16 21 N 0.04 0.34 4.45 -46.46 -0.21 0.13 16 22 O -0.19 -1.94 18.44 18.89 0.35 -1.59 16 23 O -0.14 -1.32 14.62 25.09 0.37 -0.95 16 24 C -0.11 -0.28 8.54 22.35 0.19 -0.09 16 25 C -0.13 0.69 7.22 31.12 0.22 0.92 16 26 C 0.08 -0.25 4.37 31.12 0.14 -0.11 16 27 H 0.11 -0.75 7.87 -2.39 -0.02 -0.77 16 28 O -0.38 0.84 10.13 -148.98 -1.51 -0.66 16 29 C 0.02 -0.16 10.85 113.37 1.23 1.07 16 30 C -0.13 -0.52 6.56 31.12 0.20 -0.32 16 31 H 0.13 -0.54 8.14 -2.38 -0.02 -0.56 16 32 H 0.07 0.08 8.13 -2.39 -0.02 0.06 16 33 H 0.05 0.25 8.13 -2.39 -0.02 0.23 16 34 H 0.43 -3.61 8.74 -92.71 -0.81 -4.42 16 35 H 0.13 -0.95 7.65 -2.39 -0.02 -0.97 16 36 H 0.13 -0.94 7.68 -2.39 -0.02 -0.96 16 37 H 0.07 -0.29 7.66 -2.39 -0.02 -0.31 16 38 H 0.13 -0.68 8.14 -2.39 -0.02 -0.70 16 39 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 40 H 0.17 -0.01 3.13 -2.91 -0.01 -0.02 16 41 H 0.10 -0.03 6.07 -2.38 -0.01 -0.04 16 42 H 0.41 -3.86 8.74 -74.06 -0.65 -4.51 16 43 H -0.27 0.37 6.74 99.48 0.67 1.04 16 44 H -0.28 0.11 7.11 99.48 0.71 0.82 16 45 H 0.19 -0.60 5.85 -2.91 -0.02 -0.61 16 46 H 0.12 -0.88 8.10 -2.39 -0.02 -0.89 16 47 H 0.12 -1.22 8.12 -2.39 -0.02 -1.24 16 48 H 0.06 -0.55 8.14 -2.39 -0.02 -0.57 16 49 H 0.09 -0.71 8.14 -2.38 -0.02 -0.73 16 50 H 0.05 -0.30 8.14 -2.39 -0.02 -0.32 16 51 H 0.07 0.70 6.78 -2.39 -0.02 0.68 16 52 H 0.11 0.58 7.35 -2.39 -0.02 0.56 16 Total: 0.00 -35.67 440.41 2.37 -33.30 By element: Atomic # 1 Polarization: -14.19 SS G_CDS: -0.42 Total: -14.61 kcal Atomic # 6 Polarization: 6.91 SS G_CDS: 6.55 Total: 13.46 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -2.11 Total: -1.18 kcal Atomic # 8 Polarization: -25.52 SS G_CDS: -3.73 Total: -29.25 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: 2.07 Total: -1.72 kcal Total: -35.67 2.37 -33.30 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.132 kcal (2) G-P(sol) polarization free energy of solvation -35.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.365 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.89 seconds