Wall clock time and date at job start Sun Mar 7 2021 00:16:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 N 1.46501 * 112.84940 * 334.66794 * 5 3 2 7 7 C 1.34778 * 120.00316 * 50.32926 * 6 5 3 8 8 O 1.21282 * 119.99685 * 0.02562 * 7 6 5 9 9 C 1.50693 * 120.00483 * 179.97438 * 7 6 5 10 10 O 1.42901 * 109.47714 * 180.02562 * 9 7 6 11 11 C 1.35897 * 117.00325 * 180.02562 * 10 9 7 12 12 C 1.38714 * 120.05616 * 180.02562 * 11 10 9 13 13 N 1.48010 * 120.02473 * 359.97438 * 12 11 10 14 14 O 1.21798 * 119.99901 * 179.97438 * 13 12 11 15 15 O 1.21801 * 120.00373 * 0.02562 * 13 12 11 16 16 C 1.38164 * 119.94440 * 179.97438 * 12 11 10 17 17 C 1.38235 * 120.05519 * 359.97438 * 16 12 11 18 18 C 1.50707 * 119.94203 * 180.02562 * 17 16 12 19 19 O 1.42894 * 109.47267 * 300.00275 * 18 17 16 20 20 Si 1.86297 * 109.46800 * 180.02562 * 18 17 16 21 21 C 1.38288 * 120.11356 * 0.02562 * 17 16 12 22 22 C 1.38122 * 120.05650 * 359.74489 * 21 17 16 23 23 C 1.53780 * 113.61562 * 203.47461 * 5 3 2 24 24 C 1.53786 * 87.07690 * 270.88366 * 23 5 3 25 25 H 1.08990 * 113.61429 * 89.20227 * 24 23 5 26 26 O 1.42898 * 113.61243 * 220.01906 * 24 23 5 27 27 C 1.42900 * 114.00371 * 209.99977 * 26 24 23 28 28 C 1.53779 * 113.61439 * 105.86187 * 5 3 2 29 29 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 31 31 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 32 32 H 0.96997 * 120.00328 * 230.33563 * 6 5 3 33 33 H 1.08999 * 109.47427 * 300.00806 * 9 7 6 34 34 H 1.09008 * 109.47202 * 60.00413 * 9 7 6 35 35 H 1.07997 * 119.96707 * 179.97438 * 16 12 11 36 36 H 1.09004 * 109.46781 * 60.00631 * 18 17 16 37 37 H 0.96697 * 113.99955 * 299.99985 * 19 18 17 38 38 H 1.48501 * 109.99956 * 58.68590 * 20 18 17 39 39 H 1.48508 * 109.99825 * 180.02562 * 20 18 17 40 40 H 1.08004 * 119.97318 * 180.02562 * 21 17 16 41 41 H 1.07993 * 120.02801 * 180.27674 * 22 21 17 42 42 H 1.08996 * 113.61584 * 25.42715 * 23 5 3 43 43 H 1.08998 * 113.61599 * 156.33550 * 23 5 3 44 44 H 1.08998 * 109.46787 * 59.99712 * 27 26 24 45 45 H 1.08996 * 109.47343 * 179.97438 * 27 26 24 46 46 H 1.08993 * 109.46942 * 300.00214 * 27 26 24 47 47 H 1.09001 * 113.61353 * 203.66271 * 28 5 3 48 48 H 1.08994 * 113.61412 * 334.56953 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1981 0.0863 0.5787 7 6 3.8371 -1.1416 0.1563 8 8 2.9896 -1.2625 -0.7027 9 6 4.4873 -2.3643 0.7506 10 8 3.9410 -3.5370 0.1437 11 6 4.4226 -4.7341 0.5703 12 6 3.9372 -5.9129 0.0237 13 7 2.8934 -5.8685 -1.0247 14 8 2.4679 -6.9038 -1.5047 15 8 2.4607 -4.7965 -1.4083 16 6 4.4289 -7.1286 0.4588 17 6 5.4041 -7.1707 1.4377 18 6 5.9390 -8.4982 1.9100 19 8 4.8704 -9.2765 2.4524 20 14 7.2297 -8.2157 3.2233 21 6 5.8896 -5.9969 1.9842 22 6 5.4048 -4.7789 1.5493 23 6 4.1136 2.5979 0.5618 24 6 4.0321 3.1486 -0.8718 25 1 3.0715 3.6051 -1.1102 26 8 5.1427 3.9723 -1.2325 27 6 4.8266 4.9900 -2.1847 28 6 4.1618 1.6915 -1.3546 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 4.8761 0.1829 1.2656 33 1 5.5616 -2.3288 0.5696 34 1 4.3004 -2.3898 1.8242 35 1 4.0509 -8.0467 0.0338 36 1 6.3855 -9.0297 1.0696 37 1 4.4261 -8.8637 3.2055 38 1 6.6409 -7.4641 4.3607 39 1 7.7655 -9.5172 3.6970 40 1 6.6519 -6.0324 2.7486 41 1 5.7876 -3.8623 1.9733 42 1 3.4351 3.0908 1.2580 43 1 5.1318 2.5224 0.9433 44 1 4.0594 5.6462 -1.7738 45 1 5.7216 5.5715 -2.4055 46 1 4.4575 4.5285 -3.1005 47 1 5.1933 1.3686 -1.4961 48 1 3.5223 1.4531 -2.2044 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:16:57 Heat of formation + Delta-G solvation = -141.082535 kcal Electronic energy + Delta-G solvation = -38503.140545 eV Core-core repulsion = 33110.858972 eV Total energy + Delta-G solvation = -5392.281573 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.143 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.03718 -42.53554 -41.67806 -40.49442 -40.00325 -39.34698 -37.72832 -37.62925 -37.14556 -36.88252 -34.44042 -33.50728 -32.41031 -30.34688 -28.91931 -27.87676 -27.60642 -27.22940 -26.77519 -25.83259 -24.19164 -23.26154 -22.80845 -21.69746 -20.71670 -20.49519 -19.48012 -19.46419 -19.03396 -18.46035 -18.36775 -18.33835 -17.88195 -17.73601 -17.42384 -17.32319 -17.01248 -16.91888 -16.55851 -16.39190 -16.15250 -15.82130 -15.61641 -15.35077 -15.11910 -15.01472 -14.73206 -14.39828 -14.11143 -14.02095 -13.85071 -13.69240 -13.64364 -13.33512 -13.26490 -12.92961 -12.63656 -12.57491 -12.55465 -12.30376 -12.21046 -12.12864 -12.02779 -11.86266 -11.74700 -11.62980 -11.52009 -10.98699 -10.90811 -10.83361 -10.64328 -10.37186 -9.93049 -5.23336 -1.14350 -0.39634 0.36872 0.51711 0.86831 0.99953 1.14411 1.31779 1.44393 1.66161 1.74405 1.91653 2.04224 2.73311 2.86824 2.95703 3.02091 3.13629 3.16977 3.21086 3.39900 3.46074 3.52906 3.55960 3.60409 3.67909 3.69191 3.99085 4.13124 4.16294 4.29857 4.31364 4.32291 4.39501 4.41097 4.41652 4.41954 4.44521 4.58630 4.66199 4.67226 4.73282 4.74917 4.78099 4.90971 5.04462 5.41245 5.45497 5.68912 6.08787 6.13586 6.14152 6.73003 6.92650 7.01676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.311 6.311 3 C 0.475 3.525 4 O -0.503 6.503 5 C 0.159 3.841 6 N -0.714 5.714 7 C 0.507 3.493 8 O -0.451 6.451 9 C 0.035 3.965 10 O -0.252 6.252 11 C 0.201 3.799 12 C -0.076 4.076 13 N 0.029 4.971 14 O -0.179 6.179 15 O -0.116 6.116 16 C 0.009 3.991 17 C -0.156 4.156 18 C -0.072 4.072 19 O -0.525 6.525 20 Si 0.687 3.313 21 C -0.024 4.024 22 C -0.209 4.209 23 C -0.117 4.117 24 C 0.067 3.933 25 H 0.105 0.895 26 O -0.372 6.372 27 C 0.028 3.972 28 C -0.144 4.144 29 H 0.103 0.897 30 H 0.059 0.941 31 H 0.063 0.937 32 H 0.409 0.591 33 H 0.103 0.897 34 H 0.101 0.899 35 H 0.164 0.836 36 H 0.126 0.874 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.251 1.251 40 H 0.149 0.851 41 H 0.157 0.843 42 H 0.095 0.905 43 H 0.115 0.885 44 H 0.046 0.954 45 H 0.089 0.911 46 H 0.044 0.956 47 H 0.113 0.887 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.355 2.960 6.060 10.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.225 6.225 3 C 0.316 3.684 4 O -0.391 6.391 5 C 0.070 3.930 6 N -0.372 5.372 7 C 0.290 3.710 8 O -0.320 6.320 9 C -0.044 4.044 10 O -0.161 6.161 11 C 0.151 3.849 12 C -0.160 4.160 13 N 0.549 4.451 14 O -0.387 6.387 15 O -0.341 6.341 16 C -0.010 4.010 17 C -0.158 4.158 18 C -0.182 4.182 19 O -0.331 6.331 20 Si 0.587 3.413 21 C -0.042 4.042 22 C -0.229 4.229 23 C -0.155 4.155 24 C 0.008 3.992 25 H 0.123 0.877 26 O -0.290 6.290 27 C -0.069 4.069 28 C -0.183 4.183 29 H 0.121 0.879 30 H 0.078 0.922 31 H 0.082 0.918 32 H 0.245 0.755 33 H 0.121 0.879 34 H 0.119 0.881 35 H 0.182 0.818 36 H 0.144 0.856 37 H 0.226 0.774 38 H -0.181 1.181 39 H -0.175 1.175 40 H 0.166 0.834 41 H 0.174 0.826 42 H 0.114 0.886 43 H 0.133 0.867 44 H 0.064 0.936 45 H 0.108 0.892 46 H 0.063 0.937 47 H 0.132 0.868 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 8.389 2.501 6.178 10.714 hybrid contribution -1.407 0.052 0.519 1.501 sum 6.982 2.554 6.697 10.006 Atomic orbital electron populations 1.23348 0.76875 1.04057 1.02140 1.86985 1.22782 1.30609 1.82137 1.23027 0.90261 0.82488 0.72605 1.90695 1.66064 1.36630 1.45681 1.21008 0.86732 0.86321 0.98927 1.45598 1.43878 1.03837 1.43894 1.19824 0.83560 0.83533 0.84106 1.90909 1.27923 1.85021 1.28142 1.22664 0.99364 0.83588 0.98781 1.86495 1.59618 1.10684 1.59330 1.18688 0.90670 0.84690 0.90842 1.20582 1.00935 0.93941 1.00558 1.43338 1.00446 1.00895 1.00465 1.94560 1.61834 1.23508 1.58794 1.94694 1.59539 1.17268 1.62559 1.20834 0.91754 0.96256 0.92153 1.20252 0.99746 0.96532 0.99227 1.25073 0.96341 0.90171 1.06589 1.86657 1.48193 1.47111 1.51177 0.95173 0.83395 0.83885 0.78799 1.21265 0.95770 0.91150 0.96001 1.21273 1.00403 1.00498 1.00682 1.23508 1.03215 0.90622 0.98109 1.23603 0.91305 0.89944 0.94356 0.87689 1.87906 1.33444 1.45976 1.61721 1.22868 1.02042 0.90342 0.91614 1.23991 1.03172 0.95872 0.95255 0.87852 0.92243 0.91820 0.75491 0.87920 0.88128 0.81839 0.85618 0.77423 1.18109 1.17512 0.83364 0.82565 0.88603 0.86692 0.93559 0.89220 0.93685 0.86838 0.89676 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.12 16 2 O -0.31 -1.18 6.31 -47.62 -0.30 -1.48 16 3 C 0.48 1.38 6.98 36.01 0.25 1.63 16 4 O -0.50 -2.33 14.98 -18.75 -0.28 -2.61 16 5 C 0.16 -0.07 1.22 -132.16 -0.16 -0.23 16 6 N -0.71 2.00 5.32 -47.93 -0.25 1.75 16 7 C 0.51 -0.12 7.26 -10.99 -0.08 -0.20 16 8 O -0.45 -2.11 13.03 -26.08 -0.34 -2.45 16 9 C 0.03 -0.11 5.22 36.00 0.19 0.07 16 10 O -0.25 -0.32 7.68 -49.77 -0.38 -0.70 16 11 C 0.20 0.00 6.67 -39.22 -0.26 -0.26 16 12 C -0.08 -0.16 6.87 -79.80 -0.55 -0.71 16 13 N 0.03 0.17 4.45 34.03 0.15 0.32 16 14 O -0.18 -1.22 18.45 -29.46 -0.54 -1.76 16 15 O -0.12 -0.91 17.24 -36.49 -0.63 -1.54 16 16 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 17 C -0.16 0.39 5.39 -104.60 -0.56 -0.17 16 18 C -0.07 0.21 2.82 36.01 0.10 0.31 16 19 O -0.53 0.47 12.77 -35.23 -0.45 0.02 16 20 Si 0.69 -2.72 29.78 -169.99 -5.06 -7.79 16 21 C -0.02 0.10 8.66 -39.61 -0.34 -0.24 16 22 C -0.21 0.82 9.04 -39.43 -0.36 0.46 16 23 C -0.12 0.22 6.95 -25.92 -0.18 0.04 16 24 C 0.07 -0.01 3.91 -25.77 -0.10 -0.11 16 25 H 0.11 0.07 7.05 -51.93 -0.37 -0.29 16 26 O -0.37 -0.25 10.71 -35.23 -0.38 -0.62 16 27 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 28 C -0.14 0.03 7.30 -25.78 -0.19 -0.16 16 29 H 0.10 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 31 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 32 H 0.41 -2.74 8.64 -40.82 -0.35 -3.10 16 33 H 0.10 -0.69 7.65 -51.93 -0.40 -1.09 16 34 H 0.10 -0.64 7.67 -51.92 -0.40 -1.04 16 35 H 0.16 0.03 7.61 -52.49 -0.40 -0.37 16 36 H 0.13 -0.44 7.96 -51.93 -0.41 -0.85 16 37 H 0.38 -1.44 8.70 45.56 0.40 -1.05 16 38 H -0.26 0.63 7.11 56.52 0.40 1.04 16 39 H -0.25 0.01 7.11 56.52 0.40 0.41 16 40 H 0.15 -1.03 4.87 -52.48 -0.26 -1.28 16 41 H 0.16 -1.18 6.30 -52.49 -0.33 -1.51 16 42 H 0.10 -0.14 7.85 -51.93 -0.41 -0.55 16 43 H 0.11 -0.46 8.13 -51.93 -0.42 -0.88 16 44 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 45 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 46 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 47 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.08 0.09 8.09 -51.93 -0.42 -0.33 16 LS Contribution 411.24 15.07 6.20 6.20 Total: 0.00 -13.79 411.24 -8.64 -22.42 By element: Atomic # 1 Polarization: -8.09 SS G_CDS: -5.92 Total: -14.02 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -0.44 Total: 2.26 kcal Atomic # 7 Polarization: 2.17 SS G_CDS: -0.10 Total: 2.07 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -3.30 Total: -11.15 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: -5.06 Total: -7.79 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -13.79 -8.64 -22.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.661 kcal (2) G-P(sol) polarization free energy of solvation -13.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.421 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds