Wall clock time and date at job start Sun Mar 7 2021 00:17:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34228 * 116.99867 * 2 1 4 4 O 1.20826 * 120.00196 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99726 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.85214 * 324.06143 * 5 3 2 7 7 C 1.34773 * 119.99899 * 293.64237 * 6 5 3 8 8 O 1.21286 * 119.99920 * 354.98355 * 7 6 5 9 9 C 1.50701 * 120.00268 * 174.98757 * 7 6 5 10 10 O 1.42900 * 109.47408 * 179.97438 * 9 7 6 11 11 C 1.35894 * 116.99876 * 179.97438 * 10 9 7 12 12 C 1.38714 * 120.05725 * 180.25051 * 11 10 9 13 13 C 1.38160 * 119.94949 * 180.25719 * 12 11 10 14 14 C 1.50695 * 119.97703 * 179.74595 * 13 12 11 15 15 O 1.42904 * 109.47018 * 64.72385 * 14 13 12 16 16 Si 1.86295 * 109.47348 * 184.72092 * 14 13 12 17 17 C 1.38247 * 120.05240 * 359.47232 * 13 12 11 18 18 C 1.38293 * 120.11151 * 0.27294 * 17 13 12 19 19 C 1.38118 * 120.05489 * 0.02562 * 18 17 13 20 20 C 1.53777 * 113.61403 * 192.86246 * 5 3 2 21 21 C 1.53789 * 87.08162 * 270.80077 * 20 5 3 22 22 H 1.08997 * 113.61009 * 89.11435 * 21 20 5 23 23 O 1.42898 * 113.61613 * 220.02050 * 21 20 5 24 24 C 1.42899 * 114.00048 * 210.00379 * 23 21 20 25 25 C 1.53782 * 87.08097 * 334.56799 * 21 20 5 26 26 H 1.09000 * 109.47088 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46894 * 300.00259 * 1 2 3 28 28 H 1.08997 * 109.46827 * 59.99575 * 1 2 3 29 29 H 0.97004 * 120.00154 * 113.63860 * 6 5 3 30 30 H 1.08997 * 109.47184 * 59.99214 * 9 7 6 31 31 H 1.09008 * 109.46724 * 299.99623 * 9 7 6 32 32 H 1.08003 * 120.02457 * 359.97438 * 12 11 10 33 33 H 1.08999 * 109.47157 * 304.73061 * 14 13 12 34 34 H 0.96698 * 114.00341 * 179.97438 * 15 14 13 35 35 H 1.48505 * 110.00113 * 178.68207 * 16 14 13 36 36 H 1.48492 * 110.00641 * 300.00486 * 16 14 13 37 37 H 1.08004 * 119.94633 * 180.25639 * 17 13 12 38 38 H 1.07994 * 119.97022 * 179.97438 * 18 17 13 39 39 H 1.08003 * 120.02892 * 180.02562 * 19 18 17 40 40 H 1.08998 * 113.61817 * 25.35164 * 20 5 3 41 41 H 1.09001 * 113.61272 * 156.25426 * 20 5 3 42 42 H 1.09000 * 109.46457 * 299.99589 * 24 23 21 43 43 H 1.08995 * 109.47022 * 59.99674 * 24 23 21 44 44 H 1.09002 * 109.46944 * 179.97438 * 24 23 21 45 45 H 1.09002 * 113.61490 * 270.88374 * 25 21 20 46 46 H 1.08999 * 113.61349 * 139.97597 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1914 0.2132 0.7934 7 6 4.0226 0.1823 2.1301 8 8 3.4305 1.0821 2.6876 9 6 4.5697 -0.9703 2.9323 10 8 4.2659 -0.7751 4.3149 11 6 4.6916 -1.7318 5.1811 12 6 4.4267 -1.6089 6.5371 13 6 4.8651 -2.5802 7.4164 14 6 4.5826 -2.4444 8.8904 15 8 3.1725 -2.5090 9.1131 16 14 5.4210 -3.8284 9.8135 17 6 5.5578 -3.6796 6.9444 18 6 5.8187 -3.8072 5.5923 19 6 5.3879 -2.8358 4.7100 20 6 4.1095 2.6789 0.3142 21 6 4.0445 2.9558 -1.1972 22 1 3.0867 3.3587 -1.5264 23 8 5.1602 3.6994 -1.6914 24 6 4.8559 4.5240 -2.8182 25 6 4.1771 1.4374 -1.4014 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 4.7267 -0.4675 0.3562 30 1 5.6506 -1.0230 2.8020 31 1 4.1165 -1.9000 2.5880 32 1 3.8821 -0.7522 6.9059 33 1 4.9631 -1.4871 9.2466 34 1 2.9169 -2.4286 10.0422 35 1 5.1764 -3.6877 11.2715 36 1 4.9109 -5.1390 9.3371 37 1 5.8962 -4.4399 7.6328 38 1 6.3604 -4.6667 5.2262 39 1 5.5914 -2.9361 3.6541 40 1 3.4243 3.2914 0.9002 41 1 5.1235 2.6755 0.7142 42 1 4.4961 3.9013 -3.6373 43 1 4.0854 5.2443 -2.5437 44 1 5.7542 5.0553 -3.1327 45 1 5.2095 1.0946 -1.4704 46 1 3.5463 1.0476 -2.2003 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:10 Heat of formation + Delta-G solvation = -152.446080 kcal Electronic energy + Delta-G solvation = -31278.850396 eV Core-core repulsion = 26717.092499 eV Total energy + Delta-G solvation = -4561.757897 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.55882 -41.40414 -40.48607 -39.86163 -38.82123 -37.72975 -37.37243 -37.04013 -34.46761 -32.58956 -31.67966 -29.79728 -28.97227 -27.87145 -27.14700 -26.80996 -25.83198 -23.63985 -23.41942 -22.44063 -21.49244 -20.74883 -19.35457 -19.14140 -18.52012 -18.30514 -17.98064 -17.66507 -17.39268 -17.31304 -17.24048 -16.94818 -16.82756 -16.09759 -15.85343 -15.68378 -15.54717 -15.22661 -15.00968 -14.70114 -14.53594 -14.38024 -14.05482 -13.79390 -13.72843 -13.65505 -13.55723 -13.35795 -13.28070 -13.06098 -12.63649 -12.47516 -12.29922 -12.16112 -12.05277 -11.96753 -11.83165 -11.71639 -11.65112 -10.95412 -10.63313 -10.52303 -10.44013 -9.89026 -9.23872 -4.96270 0.22582 0.43898 0.90480 1.23673 1.28598 1.35450 1.59749 1.60938 1.94919 2.39530 2.64600 2.76121 2.99235 3.14549 3.33411 3.37511 3.45886 3.60880 3.73358 3.78983 3.86952 3.89485 3.96878 4.06038 4.12579 4.22488 4.22589 4.25182 4.30248 4.32301 4.40889 4.47738 4.53056 4.55806 4.60694 4.62721 4.72204 4.75130 4.93844 4.99488 5.06299 5.25046 5.29241 5.37577 5.49028 5.65791 6.09994 6.10816 6.34430 6.44291 6.61352 6.95376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.478 3.522 4 O -0.488 6.488 5 C 0.158 3.842 6 N -0.707 5.707 7 C 0.518 3.482 8 O -0.499 6.499 9 C 0.044 3.956 10 O -0.288 6.288 11 C 0.129 3.871 12 C -0.119 4.119 13 C -0.033 4.033 14 C -0.079 4.079 15 O -0.534 6.534 16 Si 0.689 3.311 17 C -0.151 4.151 18 C -0.072 4.072 19 C -0.206 4.206 20 C -0.112 4.112 21 C 0.065 3.935 22 H 0.102 0.898 23 O -0.370 6.370 24 C 0.027 3.973 25 C -0.140 4.140 26 H 0.105 0.895 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.411 0.589 30 H 0.098 0.902 31 H 0.098 0.902 32 H 0.134 0.866 33 H 0.079 0.921 34 H 0.381 0.619 35 H -0.261 1.261 36 H -0.255 1.255 37 H 0.130 0.870 38 H 0.132 0.868 39 H 0.131 0.869 40 H 0.097 0.903 41 H 0.111 0.889 42 H 0.044 0.956 43 H 0.046 0.954 44 H 0.090 0.910 45 H 0.119 0.881 46 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.857 -4.002 -3.838 7.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.318 3.682 4 O -0.373 6.373 5 C 0.070 3.930 6 N -0.364 5.364 7 C 0.303 3.697 8 O -0.371 6.371 9 C -0.035 4.035 10 O -0.201 6.201 11 C 0.083 3.917 12 C -0.138 4.138 13 C -0.033 4.033 14 C -0.189 4.189 15 O -0.342 6.342 16 Si 0.590 3.410 17 C -0.169 4.169 18 C -0.090 4.090 19 C -0.224 4.224 20 C -0.150 4.150 21 C 0.006 3.994 22 H 0.120 0.880 23 O -0.288 6.288 24 C -0.069 4.069 25 C -0.178 4.178 26 H 0.123 0.877 27 H 0.085 0.915 28 H 0.084 0.916 29 H 0.248 0.752 30 H 0.116 0.884 31 H 0.116 0.884 32 H 0.152 0.848 33 H 0.097 0.903 34 H 0.229 0.771 35 H -0.187 1.187 36 H -0.180 1.180 37 H 0.147 0.853 38 H 0.150 0.850 39 H 0.149 0.851 40 H 0.115 0.885 41 H 0.129 0.871 42 H 0.062 0.938 43 H 0.064 0.936 44 H 0.108 0.892 45 H 0.137 0.863 46 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 4.112 -3.631 -3.404 6.456 hybrid contribution -1.287 -0.128 -0.058 1.295 sum 2.825 -3.759 -3.462 5.839 Atomic orbital electron populations 1.23372 0.75522 1.04161 1.02917 1.86481 1.23959 1.32691 1.83598 1.23111 0.90578 0.81940 0.72570 1.90702 1.66026 1.36343 1.44212 1.21004 0.85853 0.90788 0.95387 1.45549 1.53959 1.30705 1.06166 1.20168 0.80130 0.87252 0.82125 1.90826 1.39554 1.36868 1.69868 1.22407 1.01900 0.97766 0.81445 1.86161 1.74544 1.44080 1.15309 1.18987 0.94626 0.88167 0.89871 1.20245 1.02799 1.01223 0.89523 1.19022 0.96948 0.94008 0.93352 1.24866 0.86796 1.09718 0.97494 1.86604 1.20494 1.95847 1.31228 0.94951 0.90462 0.77592 0.77971 1.20932 1.02055 0.97830 0.96093 1.20878 0.97647 0.98024 0.92488 1.21287 1.04491 0.95902 1.00745 1.23505 1.03418 0.91705 0.96383 1.23584 0.91066 0.90086 0.94692 0.88043 1.87943 1.33356 1.59680 1.47809 1.22878 1.02199 0.93915 0.87955 1.23866 1.03226 0.98102 0.92644 0.87684 0.91542 0.91565 0.75240 0.88427 0.88403 0.84785 0.90313 0.77140 1.18655 1.17954 0.85290 0.84971 0.85150 0.88467 0.87078 0.93761 0.93555 0.89188 0.86259 0.89359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.78 10.42 -39.25 -0.41 -1.19 16 3 C 0.48 1.55 6.45 36.01 0.23 1.78 16 4 O -0.49 -2.80 15.12 -18.75 -0.28 -3.08 16 5 C 0.16 0.09 1.11 -132.16 -0.15 -0.06 16 6 N -0.71 0.91 5.13 -47.92 -0.25 0.67 16 7 C 0.52 0.85 7.56 -10.99 -0.08 0.77 16 8 O -0.50 -3.31 15.54 -14.36 -0.22 -3.54 16 9 C 0.04 -0.03 5.22 36.01 0.19 0.15 16 10 O -0.29 -0.96 9.67 -39.32 -0.38 -1.35 16 11 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 12 C -0.12 -0.38 9.62 -39.43 -0.38 -0.76 16 13 C -0.03 -0.07 5.38 -104.65 -0.56 -0.63 16 14 C -0.08 -0.05 2.79 36.00 0.10 0.05 16 15 O -0.53 -1.08 12.81 -35.23 -0.45 -1.53 16 16 Si 0.69 -0.51 29.85 -169.99 -5.07 -5.58 16 17 C -0.15 -0.09 8.67 -39.56 -0.34 -0.44 16 18 C -0.07 0.02 10.04 -39.61 -0.40 -0.37 16 19 C -0.21 -0.01 9.04 -39.43 -0.36 -0.36 16 20 C -0.11 -0.19 6.15 -25.92 -0.16 -0.34 16 21 C 0.06 0.03 3.92 -25.91 -0.10 -0.07 16 22 H 0.10 0.08 7.36 -51.93 -0.38 -0.31 16 23 O -0.37 -0.47 10.71 -35.23 -0.38 -0.84 16 24 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 25 C -0.14 0.25 7.21 -25.91 -0.19 0.06 16 26 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 0.09 8.13 -51.93 -0.42 -0.33 16 28 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.41 -2.12 8.71 -40.82 -0.36 -2.48 16 30 H 0.10 -0.38 7.66 -51.93 -0.40 -0.77 16 31 H 0.10 -0.31 7.66 -51.92 -0.40 -0.70 16 32 H 0.13 0.48 8.06 -52.48 -0.42 0.06 16 33 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -0.81 8.74 45.56 0.40 -0.41 16 35 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 36 H -0.25 -0.56 7.05 56.52 0.40 -0.16 16 37 H 0.13 -0.14 4.86 -52.48 -0.26 -0.40 16 38 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 39 H 0.13 -0.38 6.30 -52.48 -0.33 -0.71 16 40 H 0.10 0.38 7.64 -51.93 -0.40 -0.02 16 41 H 0.11 0.13 8.14 -51.93 -0.42 -0.29 16 42 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 44 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 45 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 46 H 0.09 -0.23 8.10 -51.93 -0.42 -0.66 16 LS Contribution 390.87 15.07 5.89 5.89 Total: 0.00 -12.24 390.87 -8.23 -20.47 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -6.38 Total: -11.91 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -0.30 Total: 1.99 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -0.25 Total: 0.67 kcal Atomic # 8 Polarization: -9.40 SS G_CDS: -2.12 Total: -11.52 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.07 Total: -5.58 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -12.24 -8.23 -20.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.975 kcal (2) G-P(sol) polarization free energy of solvation -12.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds