Wall clock time and date at job start Sun Mar 7 2021 00:17:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34229 * 117.00008 * 2 1 4 4 O 1.20824 * 119.99810 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00416 * 179.97438 * 3 2 1 6 6 N 1.46504 * 112.84703 * 35.51157 * 5 3 2 7 7 C 1.34781 * 119.99929 * 66.98992 * 6 5 3 8 8 O 1.21284 * 120.00033 * 354.95616 * 7 6 5 9 9 C 1.50701 * 120.00027 * 174.95019 * 7 6 5 10 10 O 1.42896 * 109.47236 * 180.02562 * 9 7 6 11 11 C 1.35979 * 116.99972 * 180.02562 * 10 9 7 12 12 C 1.38677 * 119.99930 * 179.97438 * 11 10 9 13 13 C 1.50700 * 120.00135 * 359.97438 * 12 11 10 14 14 O 1.42907 * 109.46713 * 284.99746 * 13 12 11 15 15 Si 1.86301 * 109.47418 * 165.00129 * 13 12 11 16 16 C 1.38161 * 119.99884 * 180.24589 * 12 11 10 17 17 C 1.38674 * 119.99862 * 359.49957 * 16 12 11 18 18 O 1.35983 * 120.00083 * 180.25018 * 17 16 12 19 19 C 1.42896 * 117.00200 * 180.26677 * 18 17 16 20 20 C 1.38724 * 119.99909 * 0.51761 * 17 16 12 21 21 C 1.38109 * 119.99839 * 359.73547 * 20 17 16 22 22 C 1.53774 * 113.69105 * 264.24805 * 5 3 2 23 23 C 1.53786 * 87.08027 * 220.00375 * 22 5 3 24 24 H 1.09004 * 113.61437 * 139.97927 * 23 22 5 25 25 O 1.42901 * 113.69192 * 270.87031 * 23 22 5 26 26 C 1.42896 * 114.00020 * 247.53381 * 25 23 22 27 27 C 1.53782 * 113.61569 * 166.70508 * 5 3 2 28 28 H 1.09002 * 109.47472 * 300.00206 * 1 2 3 29 29 H 1.09005 * 109.46985 * 60.00303 * 1 2 3 30 30 H 1.09001 * 109.47191 * 180.02562 * 1 2 3 31 31 H 0.96998 * 120.00125 * 246.99368 * 6 5 3 32 32 H 1.09004 * 109.46898 * 60.00499 * 9 7 6 33 33 H 1.08996 * 109.46959 * 300.00438 * 9 7 6 34 34 H 1.08998 * 109.47172 * 44.99727 * 13 12 11 35 35 H 0.96701 * 113.99822 * 60.00199 * 14 13 12 36 36 H 1.48501 * 109.99867 * 299.99858 * 15 13 12 37 37 H 1.48503 * 109.99899 * 61.31203 * 15 13 12 38 38 H 1.07998 * 119.99630 * 179.72237 * 16 12 11 39 39 H 1.08998 * 109.47797 * 300.00506 * 19 18 17 40 40 H 1.09002 * 109.46726 * 60.00438 * 19 18 17 41 41 H 1.08999 * 109.47351 * 179.97438 * 19 18 17 42 42 H 1.07996 * 119.99699 * 179.74804 * 20 17 16 43 43 H 1.07998 * 119.99376 * 179.97438 * 21 20 17 44 44 H 1.08999 * 113.61711 * 334.54995 * 22 5 3 45 45 H 1.09001 * 113.61728 * 105.45645 * 22 5 3 46 46 H 1.08999 * 109.47356 * 299.99787 * 26 25 23 47 47 H 1.08997 * 109.47161 * 60.00091 * 26 25 23 48 48 H 1.09005 * 109.46916 * 179.97438 * 26 25 23 49 49 H 1.08998 * 113.61831 * 254.61281 * 27 5 3 50 50 H 1.08994 * 113.61312 * 25.43909 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1922 0.2072 -0.7832 7 6 4.0355 0.1729 -2.1214 8 8 3.3028 0.9709 -2.6668 9 6 4.7707 -0.8567 -2.9401 10 8 4.4432 -0.6898 -4.3210 11 6 5.0265 -1.5462 -5.2016 12 6 4.7521 -1.4404 -6.5568 13 6 3.8070 -0.3768 -7.0535 14 8 2.4630 -0.7522 -6.7454 15 14 3.9930 -0.1929 -8.8981 16 6 5.3407 -2.3137 -7.4511 17 6 6.2140 -3.2894 -6.9946 18 8 6.7974 -4.1457 -7.8752 19 6 7.6816 -5.1295 -7.3347 20 6 6.4882 -3.3954 -5.6388 21 6 5.8957 -2.5257 -4.7444 22 6 4.1753 1.4486 1.4019 23 6 5.1714 2.4297 0.7614 24 1 5.3787 3.3053 1.3767 25 8 6.3580 1.8039 0.2693 26 6 7.5415 2.1545 0.9893 27 6 4.1097 2.6766 -0.3235 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 4.7194 -0.4752 -0.3390 32 1 4.4786 -1.8554 -2.6152 33 1 5.8447 -0.7299 -2.8038 34 1 4.0397 0.5713 -6.5686 35 1 2.2933 -0.8660 -5.8002 36 1 5.3865 0.1974 -9.2316 37 1 3.6478 -1.4698 -9.5731 38 1 5.1235 -2.2341 -8.5060 39 1 8.5044 -4.6345 -6.8189 40 1 7.1377 -5.7591 -6.6306 41 1 8.0768 -5.7457 -8.1422 42 1 7.1652 -4.1579 -5.2829 43 1 6.1089 -2.6086 -3.6889 44 1 3.4992 1.9173 2.1169 45 1 4.6425 0.5435 1.7902 46 1 7.6975 3.2316 0.9294 47 1 7.4321 1.8606 2.0332 48 1 8.3975 1.6383 0.5546 49 1 4.5239 2.7628 -1.3280 50 1 3.4151 3.4809 -0.0815 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:14 Heat of formation + Delta-G solvation = -188.045974 kcal Electronic energy + Delta-G solvation = -36868.998683 eV Core-core repulsion = 31831.477247 eV Total energy + Delta-G solvation = -5037.521436 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.164 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.49547 -41.76142 -40.68588 -40.23612 -39.53308 -38.01226 -37.62489 -36.98819 -36.79029 -34.32612 -32.79444 -31.13580 -29.86611 -29.00090 -28.11882 -27.91153 -27.20345 -26.47259 -26.32376 -23.89239 -22.73981 -22.38927 -21.91085 -20.54821 -19.56114 -19.14594 -18.79998 -18.60054 -18.11162 -17.93382 -17.50622 -17.41042 -17.39207 -17.19450 -16.91591 -16.71241 -16.24907 -16.01142 -15.89992 -15.62298 -15.45996 -15.34020 -15.11114 -14.73809 -14.57325 -14.25049 -14.12777 -13.92873 -13.84267 -13.62695 -13.49008 -13.41446 -13.35730 -13.06099 -13.01425 -12.68964 -12.63499 -12.28303 -12.25658 -12.14684 -11.96529 -11.72918 -11.56947 -11.53072 -11.09952 -10.93694 -10.84118 -10.81380 -10.28885 -10.10300 -8.83269 -4.66510 0.05273 0.33726 1.02618 1.29002 1.40451 1.53997 1.75706 1.81661 2.11676 2.23303 2.34716 2.46774 2.54668 3.06380 3.09920 3.33744 3.41447 3.53881 3.62272 3.70840 3.77227 3.86606 3.95038 4.02773 4.05627 4.12157 4.13607 4.15384 4.19331 4.20249 4.26553 4.29895 4.29963 4.31184 4.39737 4.47093 4.51803 4.52525 4.61987 4.62946 4.63369 4.63809 4.87305 5.03316 5.09837 5.14946 5.16501 5.38191 5.39916 5.97741 6.05020 6.23228 6.36717 6.73289 6.77928 7.00209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.354 6.354 3 C 0.471 3.529 4 O -0.494 6.494 5 C 0.166 3.834 6 N -0.691 5.691 7 C 0.523 3.477 8 O -0.503 6.503 9 C 0.045 3.955 10 O -0.288 6.288 11 C 0.103 3.897 12 C -0.096 4.096 13 C -0.076 4.076 14 O -0.533 6.533 15 Si 0.747 3.253 16 C -0.115 4.115 17 C 0.103 3.897 18 O -0.316 6.316 19 C 0.026 3.974 20 C -0.164 4.164 21 C -0.163 4.163 22 C -0.143 4.143 23 C 0.067 3.933 24 H 0.092 0.908 25 O -0.365 6.365 26 C 0.028 3.972 27 C -0.123 4.123 28 H 0.064 0.936 29 H 0.065 0.935 30 H 0.102 0.898 31 H 0.411 0.589 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.080 0.920 35 H 0.368 0.632 36 H -0.249 1.249 37 H -0.251 1.251 38 H 0.139 0.861 39 H 0.056 0.944 40 H 0.056 0.944 41 H 0.103 0.897 42 H 0.136 0.864 43 H 0.136 0.864 44 H 0.114 0.886 45 H 0.097 0.903 46 H 0.046 0.954 47 H 0.045 0.955 48 H 0.089 0.911 49 H 0.096 0.904 50 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.272 -2.551 6.658 8.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.270 6.270 3 C 0.312 3.688 4 O -0.379 6.379 5 C 0.077 3.923 6 N -0.347 5.347 7 C 0.308 3.692 8 O -0.376 6.376 9 C -0.034 4.034 10 O -0.201 6.201 11 C 0.058 3.942 12 C -0.098 4.098 13 C -0.184 4.184 14 O -0.339 6.339 15 Si 0.645 3.355 16 C -0.133 4.133 17 C 0.058 3.942 18 O -0.230 6.230 19 C -0.069 4.069 20 C -0.183 4.183 21 C -0.182 4.182 22 C -0.181 4.181 23 C 0.009 3.991 24 H 0.110 0.890 25 O -0.283 6.283 26 C -0.068 4.068 27 C -0.161 4.161 28 H 0.082 0.918 29 H 0.084 0.916 30 H 0.121 0.879 31 H 0.248 0.752 32 H 0.113 0.887 33 H 0.115 0.885 34 H 0.098 0.902 35 H 0.216 0.784 36 H -0.173 1.173 37 H -0.176 1.176 38 H 0.156 0.844 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.121 0.879 42 H 0.154 0.846 43 H 0.153 0.847 44 H 0.133 0.867 45 H 0.115 0.885 46 H 0.065 0.935 47 H 0.064 0.936 48 H 0.107 0.893 49 H 0.114 0.886 50 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.700 -1.896 4.478 6.763 hybrid contribution 0.938 -1.307 2.530 2.998 sum 5.637 -3.203 7.008 9.547 Atomic orbital electron populations 1.23327 0.75938 1.03932 1.02783 1.86498 1.23710 1.33134 1.83609 1.23656 0.91203 0.81782 0.72192 1.90685 1.66162 1.36415 1.44672 1.21064 0.84729 0.91053 0.95418 1.45184 1.54212 1.29403 1.05899 1.20004 0.81925 0.85170 0.82070 1.90818 1.36042 1.39905 1.70814 1.22388 1.00686 0.99188 0.81144 1.86106 1.65828 1.53239 1.14903 1.18609 0.95249 0.91286 0.89027 1.19490 1.00973 0.99191 0.90096 1.25215 0.82669 0.95743 1.14803 1.86694 1.25413 1.91885 1.29876 0.93118 0.82835 0.85936 0.73586 1.20128 0.98343 0.95036 0.99839 1.18799 0.94954 0.91832 0.88615 1.86112 1.59045 1.43406 1.34409 1.23105 0.92335 0.90286 1.01139 1.21081 1.03388 1.01951 0.91863 1.21046 0.99814 0.96934 1.00427 1.23817 0.98657 1.02353 0.93304 1.23007 0.85376 0.95083 0.95678 0.89025 1.87896 1.14817 1.69136 1.56440 1.22887 0.87139 1.00395 0.96377 1.23596 0.96590 0.94220 1.01680 0.91752 0.91612 0.87932 0.75235 0.88700 0.88456 0.90220 0.78415 1.17319 1.17591 0.84396 0.92514 0.92504 0.87880 0.84597 0.84672 0.86732 0.88460 0.93536 0.93645 0.89252 0.88590 0.86048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 101.05 1.07 1.09 16 2 O -0.35 -0.91 10.41 -39.26 -0.41 -1.32 16 3 C 0.47 1.58 6.42 36.01 0.23 1.81 16 4 O -0.49 -2.94 15.66 -18.75 -0.29 -3.24 16 5 C 0.17 0.07 1.00 -132.16 -0.13 -0.07 16 6 N -0.69 0.60 4.53 -47.92 -0.22 0.39 16 7 C 0.52 0.82 7.39 -10.98 -0.08 0.74 16 8 O -0.50 -3.06 15.22 -14.36 -0.22 -3.28 16 9 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 10 O -0.29 -0.73 8.56 -39.58 -0.34 -1.07 16 11 C 0.10 0.27 6.62 -39.24 -0.26 0.01 16 12 C -0.10 -0.37 5.27 -104.49 -0.55 -0.92 16 13 C -0.08 -0.26 2.33 36.01 0.08 -0.18 16 14 O -0.53 -2.32 12.65 -35.23 -0.45 -2.77 16 15 Si 0.75 1.52 30.41 -169.99 -5.17 -3.65 16 16 C -0.12 -0.48 8.59 -39.45 -0.34 -0.82 16 17 C 0.10 0.33 6.69 -39.24 -0.26 0.07 16 18 O -0.32 -0.95 10.50 -19.69 -0.21 -1.15 16 19 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 20 C -0.16 -0.17 9.03 -39.45 -0.36 -0.52 16 21 C -0.16 -0.10 9.03 -39.45 -0.36 -0.45 16 22 C -0.14 0.37 7.20 -25.92 -0.19 0.19 16 23 C 0.07 -0.13 4.37 -25.91 -0.11 -0.24 16 24 H 0.09 -0.31 7.87 -51.93 -0.41 -0.72 16 25 O -0.36 0.50 10.14 -35.23 -0.36 0.14 16 26 C 0.03 -0.09 10.85 101.05 1.10 1.00 16 27 C -0.12 -0.08 6.67 -25.91 -0.17 -0.25 16 28 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 29 H 0.07 0.11 8.13 -51.93 -0.42 -0.31 16 30 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 31 H 0.41 -1.62 8.67 -40.82 -0.35 -1.97 16 32 H 0.10 -0.32 7.66 -51.93 -0.40 -0.71 16 33 H 0.10 -0.29 7.66 -51.93 -0.40 -0.69 16 34 H 0.08 0.26 7.82 -51.93 -0.41 -0.15 16 35 H 0.37 1.14 8.60 45.56 0.39 1.53 16 36 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 37 H -0.25 -1.06 6.80 56.52 0.38 -0.67 16 38 H 0.14 0.59 4.94 -52.49 -0.26 0.33 16 39 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 40 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 41 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.14 -0.21 6.29 -52.49 -0.33 -0.54 16 43 H 0.14 -0.35 6.29 -52.49 -0.33 -0.68 16 44 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 45 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 46 H 0.05 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.04 -0.19 8.14 -51.93 -0.42 -0.61 16 48 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 49 H 0.10 0.24 7.41 -51.93 -0.38 -0.14 16 50 H 0.12 0.11 7.34 -51.93 -0.38 -0.27 16 LS Contribution 418.10 15.07 6.30 6.30 Total: 0.00 -11.25 418.10 -7.58 -18.83 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -7.07 Total: -11.73 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: 0.85 Total: 2.56 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.22 Total: 0.39 kcal Atomic # 8 Polarization: -10.42 SS G_CDS: -2.27 Total: -12.69 kcal Atomic # 14 Polarization: 1.52 SS G_CDS: -5.17 Total: -3.65 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -11.25 -7.58 -18.83 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.217 kcal (2) G-P(sol) polarization free energy of solvation -11.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds