Wall clock time and date at job start Sun Mar 7 2021 00:17:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34232 * 116.99954 * 2 1 4 4 O 1.20821 * 120.00003 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99669 * 179.97438 * 3 2 1 6 6 N 1.46501 * 112.85162 * 334.66117 * 5 3 2 7 7 C 1.34774 * 119.99540 * 50.33618 * 6 5 3 8 8 O 1.21277 * 120.00605 * 359.97438 * 7 6 5 9 9 C 1.50706 * 119.99821 * 180.02562 * 7 6 5 10 10 O 1.42891 * 109.47373 * 179.97438 * 9 7 6 11 11 C 1.35899 * 117.00352 * 179.97438 * 10 9 7 12 12 C 1.38748 * 120.02867 * 180.02562 * 11 10 9 13 13 C 1.50700 * 119.97479 * 359.97438 * 12 11 10 14 14 O 1.42898 * 109.47099 * 74.99703 * 13 12 11 15 15 Si 1.86301 * 109.47059 * 194.99973 * 13 12 11 16 16 C 1.38198 * 120.05244 * 179.97438 * 12 11 10 17 17 C 1.38150 * 120.11079 * 0.04429 * 16 12 11 18 18 C 1.38794 * 120.05479 * 359.95320 * 17 16 12 19 19 O 1.35899 * 120.02761 * 180.29443 * 18 17 16 20 20 C 1.42902 * 117.00042 * 359.73580 * 19 18 17 21 21 C 1.38615 * 119.94440 * 0.02746 * 18 17 16 22 22 C 1.53780 * 113.60889 * 203.46764 * 5 3 2 23 23 C 1.53780 * 87.08256 * 270.79615 * 22 5 3 24 24 H 1.09001 * 113.60929 * 89.11815 * 23 22 5 25 25 O 1.42893 * 113.61935 * 219.93572 * 23 22 5 26 26 C 1.42903 * 114.00504 * 210.00355 * 25 23 22 27 27 C 1.53785 * 113.61430 * 105.86358 * 5 3 2 28 28 H 1.08993 * 109.47244 * 300.00824 * 1 2 3 29 29 H 1.09001 * 109.46718 * 60.00620 * 1 2 3 30 30 H 1.09002 * 109.47076 * 180.02562 * 1 2 3 31 31 H 0.96997 * 119.99784 * 230.33692 * 6 5 3 32 32 H 1.09001 * 109.46876 * 59.99595 * 9 7 6 33 33 H 1.09009 * 109.46854 * 300.00273 * 9 7 6 34 34 H 1.08996 * 109.47043 * 314.99765 * 13 12 11 35 35 H 0.96702 * 113.99631 * 59.99933 * 14 13 12 36 36 H 1.48505 * 109.99627 * 180.02562 * 15 13 12 37 37 H 1.48501 * 109.99837 * 301.31501 * 15 13 12 38 38 H 1.08000 * 119.94719 * 180.02562 * 16 12 11 39 39 H 1.08001 * 119.97703 * 179.97438 * 17 16 12 40 40 H 1.09004 * 109.46420 * 299.99136 * 20 19 18 41 41 H 1.08993 * 109.47450 * 59.99009 * 20 19 18 42 42 H 1.08998 * 109.46791 * 179.97438 * 20 19 18 43 43 H 1.08003 * 120.04971 * 179.97438 * 21 18 17 44 44 H 1.08995 * 113.62090 * 25.35145 * 22 5 3 45 45 H 1.09006 * 113.61345 * 156.25328 * 22 5 3 46 46 H 1.09002 * 109.46390 * 300.00353 * 26 25 23 47 47 H 1.09005 * 109.47013 * 59.99581 * 26 25 23 48 48 H 1.08997 * 109.47311 * 180.02562 * 26 25 23 49 49 H 1.08998 * 113.61043 * 203.74564 * 27 5 3 50 50 H 1.08999 * 113.61197 * 334.64373 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 7 4.1981 0.0862 0.5788 7 6 3.8371 -1.1416 0.1564 8 8 2.9890 -1.2627 -0.7020 9 6 4.4865 -2.3644 0.7516 10 8 3.9395 -3.5371 0.1455 11 6 4.4210 -4.7341 0.5722 12 6 3.9344 -5.9130 0.0257 13 6 2.8711 -5.8656 -1.0412 14 8 3.4564 -5.4577 -2.2793 15 14 2.1143 -7.5565 -1.2392 16 6 4.4240 -7.1305 0.4589 17 6 5.3981 -7.1773 1.4374 18 6 5.8882 -6.0008 1.9872 19 8 6.8507 -6.0473 2.9454 20 6 7.3080 -7.3413 3.3434 21 6 5.3989 -4.7784 1.5541 22 6 4.1136 2.5979 0.5617 23 6 4.0344 3.1478 -0.8723 24 1 3.0738 3.6034 -1.1127 25 8 5.1449 3.9722 -1.2314 26 6 4.8297 4.9891 -2.1847 27 6 4.1619 1.6914 -1.3547 28 1 -0.3633 0.5139 0.8898 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 4.8761 0.1830 1.2657 32 1 4.2987 -2.3894 1.8251 33 1 5.5610 -2.3292 0.5715 34 1 2.0983 -5.1533 -0.7525 35 1 4.1539 -6.0470 -2.5976 36 1 1.0645 -7.5233 -2.2890 37 1 3.1633 -8.5431 -1.6017 38 1 4.0444 -8.0471 0.0320 39 1 5.7790 -8.1300 1.7746 40 1 6.4713 -7.9159 3.7407 41 1 7.7278 -7.8594 2.4813 42 1 8.0739 -7.2355 4.1117 43 1 5.7787 -3.8619 1.9810 44 1 3.4345 3.0916 1.2568 45 1 5.1314 2.5221 0.9446 46 1 4.4626 4.5268 -3.1010 47 1 4.0611 5.6450 -1.7755 48 1 5.7248 5.5708 -2.4049 49 1 5.1929 1.3672 -1.4966 50 1 3.5217 1.4542 -2.2043 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:18 Heat of formation + Delta-G solvation = -179.927398 kcal Electronic energy + Delta-G solvation = -36696.252527 eV Core-core repulsion = 31659.083139 eV Total energy + Delta-G solvation = -5037.169388 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.164 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.48006 -41.73756 -40.53200 -40.02664 -39.56443 -38.24943 -37.64832 -36.96276 -36.77967 -34.32441 -32.28233 -31.43939 -29.83961 -28.79927 -28.49213 -27.81265 -27.16467 -26.06913 -25.80371 -23.85895 -23.07312 -22.45495 -21.51414 -20.65927 -19.97609 -19.24468 -18.47692 -18.11164 -17.83962 -17.65691 -17.62940 -17.28532 -17.22233 -17.07684 -16.82352 -16.72582 -16.42764 -16.11799 -15.88751 -15.68327 -15.22510 -15.16085 -15.06468 -14.89182 -14.47172 -14.45115 -14.32770 -13.71531 -13.65063 -13.59639 -13.52106 -13.39732 -13.24071 -13.12141 -12.90697 -12.60193 -12.53925 -12.29193 -12.23832 -12.08565 -11.96899 -11.68784 -11.60431 -11.53697 -11.46612 -10.70984 -10.59323 -10.37582 -10.28152 -9.69001 -9.07397 -4.89316 0.21719 0.34007 1.00312 1.39096 1.39935 1.57403 1.62531 1.70904 2.04392 2.14017 2.43044 2.59138 2.80624 2.97073 3.21914 3.47997 3.55787 3.58813 3.68537 3.70433 3.80400 3.88023 3.93860 4.01336 4.03839 4.03965 4.14072 4.26114 4.30860 4.35081 4.38382 4.39927 4.41134 4.44298 4.47199 4.49367 4.52353 4.64300 4.71737 4.75373 4.76947 4.77658 4.80855 5.04411 5.13825 5.23672 5.28912 5.45796 5.47910 6.09995 6.13457 6.25862 6.36321 6.62746 6.76823 7.13910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.311 6.311 3 C 0.476 3.524 4 O -0.504 6.504 5 C 0.158 3.842 6 N -0.715 5.715 7 C 0.510 3.490 8 O -0.463 6.463 9 C 0.041 3.959 10 O -0.270 6.270 11 C 0.194 3.806 12 C -0.182 4.182 13 C -0.058 4.058 14 O -0.521 6.521 15 Si 0.685 3.315 16 C -0.043 4.043 17 C -0.239 4.239 18 C 0.174 3.826 19 O -0.315 6.315 20 C 0.026 3.974 21 C -0.247 4.247 22 C -0.117 4.117 23 C 0.067 3.933 24 H 0.105 0.895 25 O -0.372 6.372 26 C 0.028 3.972 27 C -0.144 4.144 28 H 0.060 0.940 29 H 0.062 0.938 30 H 0.102 0.898 31 H 0.409 0.591 32 H 0.096 0.904 33 H 0.096 0.904 34 H 0.118 0.882 35 H 0.369 0.631 36 H -0.257 1.257 37 H -0.261 1.261 38 H 0.138 0.862 39 H 0.134 0.866 40 H 0.060 0.940 41 H 0.058 0.942 42 H 0.103 0.897 43 H 0.138 0.862 44 H 0.095 0.905 45 H 0.115 0.885 46 H 0.044 0.956 47 H 0.046 0.954 48 H 0.089 0.911 49 H 0.113 0.887 50 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.341 -2.313 5.054 6.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.225 6.225 3 C 0.317 3.683 4 O -0.392 6.392 5 C 0.070 3.930 6 N -0.373 5.373 7 C 0.294 3.706 8 O -0.333 6.333 9 C -0.038 4.038 10 O -0.182 6.182 11 C 0.147 3.853 12 C -0.183 4.183 13 C -0.168 4.168 14 O -0.326 6.326 15 Si 0.587 3.413 16 C -0.061 4.061 17 C -0.258 4.258 18 C 0.128 3.872 19 O -0.228 6.228 20 C -0.069 4.069 21 C -0.267 4.267 22 C -0.154 4.154 23 C 0.008 3.992 24 H 0.122 0.878 25 O -0.290 6.290 26 C -0.069 4.069 27 C -0.183 4.183 28 H 0.078 0.922 29 H 0.081 0.919 30 H 0.120 0.880 31 H 0.246 0.754 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.136 0.864 35 H 0.216 0.784 36 H -0.182 1.182 37 H -0.186 1.186 38 H 0.155 0.845 39 H 0.152 0.848 40 H 0.078 0.922 41 H 0.077 0.923 42 H 0.121 0.879 43 H 0.156 0.844 44 H 0.114 0.886 45 H 0.133 0.867 46 H 0.063 0.937 47 H 0.064 0.936 48 H 0.108 0.892 49 H 0.131 0.869 50 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 1.990 -2.167 3.956 4.931 hybrid contribution 1.102 0.124 -0.230 1.132 sum 3.092 -2.043 3.726 5.255 Atomic orbital electron populations 1.23337 0.77069 1.03928 1.02142 1.87000 1.22625 1.30674 1.82169 1.23042 0.90289 0.82426 0.72505 1.90689 1.66092 1.36621 1.45754 1.20987 0.86693 0.86509 0.98859 1.45633 1.43858 1.03902 1.43862 1.20013 0.83230 0.83668 0.83709 1.90844 1.28528 1.85268 1.28677 1.22453 0.98989 0.83873 0.98492 1.86254 1.60612 1.10955 1.60334 1.18386 0.90843 0.85096 0.90979 1.19498 1.04397 0.90531 1.03873 1.24801 0.96936 1.12124 0.82941 1.86701 1.55702 1.52858 1.37358 0.95225 0.81671 0.74975 0.89454 1.20777 0.94103 0.96593 0.94593 1.21115 1.03784 0.97592 1.03331 1.18698 0.87553 0.93392 0.87526 1.86077 1.51986 1.31874 1.52826 1.23145 1.00017 0.83113 1.00661 1.20399 1.04226 0.97612 1.04442 1.23504 1.03254 0.90657 0.98031 1.23581 0.91244 0.89937 0.94434 0.87753 1.87911 1.33506 1.45961 1.61636 1.22867 1.02021 0.90376 0.91588 1.23970 1.03176 0.95881 0.95265 0.92177 0.91936 0.87953 0.75433 0.88648 0.88662 0.86445 0.78409 1.18235 1.18647 0.84486 0.84811 0.92168 0.92315 0.87889 0.84389 0.88601 0.86687 0.93742 0.93563 0.89237 0.86869 0.89798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.13 16 2 O -0.31 -1.33 6.31 -47.61 -0.30 -1.63 16 3 C 0.48 1.71 6.98 36.01 0.25 1.96 16 4 O -0.50 -2.60 14.99 -18.75 -0.28 -2.88 16 5 C 0.16 0.10 1.22 -132.16 -0.16 -0.06 16 6 N -0.71 0.88 5.32 -47.92 -0.25 0.63 16 7 C 0.51 0.71 7.26 -10.98 -0.08 0.63 16 8 O -0.46 -2.63 13.03 -26.08 -0.34 -2.97 16 9 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 10 O -0.27 -0.77 8.99 -39.33 -0.35 -1.12 16 11 C 0.19 0.38 6.66 -39.24 -0.26 0.12 16 12 C -0.18 -0.27 5.27 -104.45 -0.55 -0.82 16 13 C -0.06 -0.11 2.37 36.01 0.09 -0.02 16 14 O -0.52 -1.88 12.88 -35.23 -0.45 -2.34 16 15 Si 0.68 -0.01 30.24 -169.99 -5.14 -5.15 16 16 C -0.04 0.00 8.65 -39.63 -0.34 -0.35 16 17 C -0.24 0.01 9.04 -39.41 -0.36 -0.34 16 18 C 0.17 0.17 6.68 -39.24 -0.26 -0.09 16 19 O -0.31 -0.22 10.49 -19.42 -0.20 -0.43 16 20 C 0.03 -0.07 9.81 101.05 0.99 0.93 16 21 C -0.25 -0.22 8.97 -39.29 -0.35 -0.57 16 22 C -0.12 0.10 6.96 -25.92 -0.18 -0.08 16 23 C 0.07 0.05 3.90 -25.83 -0.10 -0.05 16 24 H 0.10 0.14 7.05 -51.93 -0.37 -0.23 16 25 O -0.37 -0.53 10.72 -35.23 -0.38 -0.91 16 26 C 0.03 -0.01 10.85 101.05 1.10 1.08 16 27 C -0.14 -0.12 7.30 -25.83 -0.19 -0.30 16 28 H 0.06 0.08 8.13 -51.93 -0.42 -0.35 16 29 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 30 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.41 -1.96 8.64 -40.82 -0.35 -2.32 16 32 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 33 H 0.10 -0.28 7.66 -51.92 -0.40 -0.68 16 34 H 0.12 0.31 7.82 -51.93 -0.41 -0.10 16 35 H 0.37 0.10 8.70 45.56 0.40 0.49 16 36 H -0.26 -0.89 7.11 56.52 0.40 -0.48 16 37 H -0.26 -0.27 6.68 56.52 0.38 0.11 16 38 H 0.14 -0.21 4.85 -52.49 -0.25 -0.47 16 39 H 0.13 -0.28 6.29 -52.49 -0.33 -0.61 16 40 H 0.06 -0.21 7.67 -51.93 -0.40 -0.61 16 41 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 42 H 0.10 -0.41 8.14 -51.93 -0.42 -0.84 16 43 H 0.14 -0.14 6.30 -52.48 -0.33 -0.47 16 44 H 0.10 -0.06 7.84 -51.93 -0.41 -0.47 16 45 H 0.11 -0.32 8.13 -51.93 -0.42 -0.75 16 46 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 47 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 48 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 49 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 50 H 0.08 0.17 8.09 -51.93 -0.42 -0.25 16 LS Contribution 413.94 15.07 6.24 6.24 Total: 0.00 -11.40 413.94 -7.71 -19.11 By element: Atomic # 1 Polarization: -4.77 SS G_CDS: -7.09 Total: -11.86 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: 0.84 Total: 3.32 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.25 Total: 0.63 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -2.31 Total: -12.28 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.14 Total: -5.15 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -11.40 -7.71 -19.11 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.818 kcal (2) G-P(sol) polarization free energy of solvation -11.396 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.214 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds