Wall clock time and date at job start Sun Mar 7 2021 00:17:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34227 * 117.00028 * 2 1 4 4 O 1.20823 * 120.00202 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99812 * 179.72636 * 3 2 1 6 6 N 1.46504 * 112.85299 * 24.07758 * 5 3 2 7 7 C 1.34773 * 119.99314 * 309.66460 * 6 5 3 8 8 O 1.21696 * 120.00514 * 354.15625 * 7 6 5 9 9 C 1.46680 * 119.99690 * 174.15185 * 7 6 5 10 10 C 1.37883 * 126.22182 * 4.82969 * 9 7 6 11 11 C 1.39883 * 107.09056 * 179.84881 * 10 9 7 12 12 Br 1.89099 * 126.07521 * 180.16424 * 11 10 9 13 13 C 1.35506 * 107.84901 * 0.42349 * 11 10 9 14 14 C 1.50703 * 125.56671 * 179.72190 * 13 11 10 15 15 O 1.42898 * 109.47500 * 51.87250 * 14 13 11 16 16 Si 1.86297 * 109.46978 * 291.86820 * 14 13 11 17 17 N 1.35598 * 108.85888 * 359.73566 * 13 11 10 18 18 C 1.46500 * 125.67369 * 180.02562 * 17 13 11 19 19 C 1.53775 * 113.61284 * 252.76536 * 5 3 2 20 20 C 1.53775 * 87.08401 * 220.01921 * 19 5 3 21 21 H 1.09000 * 113.69292 * 139.98983 * 20 19 5 22 22 O 1.42898 * 113.62148 * 270.88624 * 20 19 5 23 23 C 1.42904 * 114.00120 * 247.49981 * 22 20 19 24 24 C 1.53778 * 87.08191 * 25.43750 * 20 19 5 25 25 H 1.09005 * 109.47224 * 180.02562 * 1 2 3 26 26 H 1.09007 * 109.47146 * 300.00135 * 1 2 3 27 27 H 1.08994 * 109.47338 * 60.00395 * 1 2 3 28 28 H 0.97000 * 120.00230 * 129.66832 * 6 5 3 29 29 H 1.08002 * 126.45723 * 0.02562 * 10 9 7 30 30 H 1.09003 * 109.46601 * 171.87529 * 14 13 11 31 31 H 0.96697 * 113.99720 * 179.97438 * 15 14 13 32 32 H 1.48495 * 110.00443 * 304.72569 * 16 14 13 33 33 H 1.48501 * 109.99829 * 66.04612 * 16 14 13 34 34 H 1.09011 * 109.46682 * 271.09669 * 18 17 13 35 35 H 1.08998 * 109.47445 * 31.09792 * 18 17 13 36 36 H 1.08996 * 109.47126 * 151.10366 * 18 17 13 37 37 H 1.09003 * 113.61864 * 334.57328 * 19 5 3 38 38 H 1.09002 * 113.61321 * 105.47494 * 19 5 3 39 39 H 1.08998 * 109.46849 * 179.97438 * 23 22 20 40 40 H 1.09001 * 109.46712 * 299.99085 * 23 22 20 41 41 H 1.08992 * 109.47327 * 59.99354 * 23 22 20 42 42 H 1.08999 * 113.61548 * 220.02432 * 24 20 19 43 43 H 1.08994 * 113.69910 * 89.12190 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0062 6 7 4.2013 0.0725 -0.5392 7 6 3.8377 -1.1447 -0.0891 8 8 3.0612 -1.2419 0.8429 9 6 4.3778 -2.3523 -0.7227 10 6 5.3307 -2.3934 -1.7184 11 6 5.5508 -3.7411 -2.0215 12 35 6.7603 -4.4090 -3.3126 13 6 4.7392 -4.4829 -1.2294 14 6 4.6490 -5.9872 -1.2310 15 8 5.9582 -6.5431 -1.0934 16 14 3.8953 -6.5625 -2.8346 17 7 4.0213 -3.6504 -0.4356 18 6 3.0313 -4.0638 0.5620 19 6 4.1538 1.7268 1.3535 20 6 5.1612 2.5611 0.5450 21 1 5.3614 3.5428 0.9743 22 8 6.3536 1.8496 0.2074 23 6 7.5269 2.3386 0.8603 24 6 4.1170 2.5839 -0.5837 25 1 -0.3634 -1.0277 0.0005 26 1 -0.3634 0.5139 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 4.8834 0.1525 -1.2243 29 1 5.8176 -1.5449 -2.1760 30 1 4.0259 -6.3146 -0.3986 31 1 5.9762 -7.5099 -1.0862 32 1 2.5818 -5.9024 -3.0442 33 1 4.8066 -6.2504 -3.9648 34 1 2.0512 -4.1408 0.0910 35 1 3.3135 -5.0326 0.9742 36 1 2.9924 -3.3256 1.3630 37 1 3.4674 2.3283 1.9495 38 1 4.6134 0.9187 1.9226 39 1 8.3881 1.7458 0.5519 40 1 7.6867 3.3816 0.5871 41 1 7.4008 2.2610 1.9402 42 1 4.5468 2.4676 -1.5786 43 1 3.4199 3.4193 -0.5188 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:21 Heat of formation + Delta-G solvation = -86.828323 kcal Electronic energy + Delta-G solvation = -31715.571805 eV Core-core repulsion = 27198.323726 eV Total energy + Delta-G solvation = -4517.248079 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.055 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.97242 -42.36341 -40.53842 -39.67270 -37.75796 -37.66092 -36.96474 -34.89194 -34.01096 -32.15093 -30.95085 -29.40752 -27.85084 -27.40127 -27.33935 -27.02254 -25.98220 -23.52999 -22.67174 -21.72283 -20.60663 -20.28958 -19.21628 -18.98921 -18.43139 -18.13122 -17.61068 -17.30269 -17.18400 -16.88381 -16.71921 -16.07063 -15.92116 -15.77412 -15.40573 -15.09186 -14.89376 -14.82808 -14.62265 -14.46381 -14.36090 -13.93524 -13.73727 -13.67016 -13.60446 -13.29950 -13.19108 -13.08048 -12.78528 -12.59477 -12.37198 -12.21060 -12.02836 -11.88063 -11.75277 -11.57318 -11.18327 -10.90003 -10.61967 -10.58761 -10.34953 -9.84472 -9.28404 -5.03111 0.10618 0.61172 0.84036 0.94978 1.19745 1.51590 1.61978 1.66898 2.07133 2.09931 2.14985 2.57063 3.00921 3.17404 3.25440 3.43320 3.52501 3.65245 3.69736 3.75723 3.98705 4.12756 4.16848 4.18108 4.19218 4.26993 4.35722 4.37827 4.45914 4.53864 4.55833 4.56989 4.60381 4.66252 4.67740 4.72238 4.79226 4.91191 5.15619 5.23948 5.25714 5.52851 5.76797 6.16449 6.28584 6.53208 6.88729 6.99334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.335 6.335 3 C 0.466 3.534 4 O -0.528 6.528 5 C 0.157 3.843 6 N -0.680 5.680 7 C 0.595 3.405 8 O -0.530 6.530 9 C -0.042 4.042 10 C -0.113 4.113 11 C -0.181 4.181 12 Br -0.015 7.015 13 C 0.077 3.923 14 C -0.051 4.051 15 O -0.546 6.546 16 Si 0.763 3.237 17 N -0.397 5.397 18 C 0.055 3.945 19 C -0.147 4.147 20 C 0.076 3.924 21 H 0.112 0.888 22 O -0.380 6.380 23 C 0.026 3.974 24 C -0.115 4.115 25 H 0.116 0.884 26 H 0.060 0.940 27 H 0.061 0.939 28 H 0.422 0.578 29 H 0.173 0.827 30 H 0.101 0.899 31 H 0.408 0.592 32 H -0.306 1.306 33 H -0.256 1.256 34 H 0.089 0.911 35 H 0.112 0.888 36 H 0.101 0.899 37 H 0.110 0.890 38 H 0.079 0.921 39 H 0.093 0.907 40 H 0.058 0.942 41 H 0.045 0.955 42 H 0.109 0.891 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.112 -2.583 0.968 2.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.250 6.250 3 C 0.309 3.691 4 O -0.418 6.418 5 C 0.067 3.933 6 N -0.335 5.335 7 C 0.383 3.617 8 O -0.407 6.407 9 C -0.156 4.156 10 C -0.140 4.140 11 C -0.267 4.267 12 Br 0.069 6.931 13 C -0.044 4.044 14 C -0.160 4.160 15 O -0.356 6.356 16 Si 0.665 3.335 17 N -0.071 5.071 18 C -0.084 4.084 19 C -0.186 4.186 20 C 0.018 3.982 21 H 0.130 0.870 22 O -0.298 6.298 23 C -0.070 4.070 24 C -0.152 4.152 25 H 0.135 0.865 26 H 0.079 0.921 27 H 0.079 0.921 28 H 0.261 0.739 29 H 0.191 0.809 30 H 0.119 0.881 31 H 0.260 0.740 32 H -0.234 1.234 33 H -0.181 1.181 34 H 0.107 0.893 35 H 0.130 0.870 36 H 0.120 0.880 37 H 0.128 0.872 38 H 0.098 0.902 39 H 0.112 0.888 40 H 0.077 0.923 41 H 0.064 0.936 42 H 0.127 0.873 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.373 -2.027 0.542 2.131 hybrid contribution -0.249 0.928 0.582 1.123 sum 0.124 -1.100 1.124 1.577 Atomic orbital electron populations 1.23438 0.76302 1.04829 1.02192 1.86869 1.23668 1.32114 1.82332 1.24093 0.91981 0.81677 0.71328 1.90661 1.66891 1.37066 1.47136 1.21300 0.83708 0.88032 1.00227 1.45009 1.42539 1.02652 1.43265 1.16774 0.80200 0.82314 0.82460 1.90806 1.35091 1.86598 1.28221 1.19994 1.05618 0.85037 1.04979 1.21516 0.98630 0.96285 0.97580 1.20989 1.05077 0.95449 1.05150 1.96617 1.58359 1.86789 1.51284 1.20085 0.96380 0.93098 0.94827 1.24260 0.91456 0.87029 1.13259 1.86506 1.24395 1.27802 1.96905 0.95258 0.75149 0.88350 0.74757 1.43901 1.30703 1.04223 1.28225 1.22603 0.90564 1.04029 0.91254 1.23911 0.98927 1.01134 0.94580 1.22956 0.84766 0.95742 0.94741 0.86987 1.87838 1.15682 1.57918 1.68391 1.22985 0.86812 1.00230 0.96958 1.23638 0.97134 0.93368 1.01063 0.86535 0.92105 0.92063 0.73906 0.80926 0.88137 0.73975 1.23411 1.18076 0.89271 0.87007 0.88017 0.87165 0.90213 0.88812 0.92338 0.93631 0.87269 0.85235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.11 10.56 113.37 1.20 1.31 16 2 O -0.34 -3.15 6.57 -43.56 -0.29 -3.44 16 3 C 0.47 4.00 7.04 71.24 0.50 4.51 16 4 O -0.53 -6.25 15.81 21.97 0.35 -5.90 16 5 C 0.16 0.46 1.06 3.39 0.00 0.47 16 6 N -0.68 -1.81 4.75 -427.82 -2.03 -3.84 16 7 C 0.59 4.16 6.93 86.45 0.60 4.75 16 8 O -0.53 -5.74 11.61 19.33 0.22 -5.52 16 9 C -0.04 -0.28 6.88 40.35 0.28 0.00 16 10 C -0.11 -0.63 10.34 22.58 0.23 -0.39 16 11 C -0.18 -1.37 6.12 22.04 0.13 -1.23 16 12 Br -0.01 -0.10 30.81 -20.37 -0.63 -0.73 16 13 C 0.08 0.43 5.27 41.35 0.22 0.65 16 14 C -0.05 0.06 2.73 71.24 0.19 0.25 16 15 O -0.55 0.81 11.96 -148.98 -1.78 -0.97 16 16 Si 0.76 -1.18 31.62 68.60 2.17 0.99 16 17 N -0.40 -2.16 3.16 -519.60 -1.64 -3.81 16 18 C 0.06 0.01 10.35 127.77 1.32 1.33 16 19 C -0.15 -0.16 7.25 31.12 0.23 0.06 16 20 C 0.08 -0.23 4.37 31.12 0.14 -0.09 16 21 H 0.11 -0.78 7.87 -2.39 -0.02 -0.79 16 22 O -0.38 0.47 10.01 -148.98 -1.49 -1.03 16 23 C 0.03 -0.12 10.85 113.37 1.23 1.11 16 24 C -0.11 0.27 7.07 31.12 0.22 0.49 16 25 H 0.12 -0.01 8.14 -2.38 -0.02 -0.02 16 26 H 0.06 0.27 8.13 -2.38 -0.02 0.25 16 27 H 0.06 0.23 8.13 -2.39 -0.02 0.21 16 28 H 0.42 -0.44 7.38 -92.71 -0.68 -1.13 16 29 H 0.17 0.08 7.45 -2.91 -0.02 0.06 16 30 H 0.10 -0.68 6.47 -2.39 -0.02 -0.69 16 31 H 0.41 -4.97 8.74 -74.06 -0.65 -5.62 16 32 H -0.31 -1.85 7.11 99.48 0.71 -1.14 16 33 H -0.26 -1.13 6.17 99.48 0.61 -0.51 16 34 H 0.09 -0.14 8.14 -2.38 -0.02 -0.16 16 35 H 0.11 -0.59 6.93 -2.39 -0.02 -0.61 16 36 H 0.10 0.33 6.16 -2.39 -0.01 0.31 16 37 H 0.11 0.04 8.09 -2.39 -0.02 0.02 16 38 H 0.08 0.33 8.14 -2.39 -0.02 0.31 16 39 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.06 -0.41 8.14 -2.39 -0.02 -0.43 16 41 H 0.04 -0.22 8.14 -2.39 -0.02 -0.24 16 42 H 0.11 -0.53 8.11 -2.39 -0.02 -0.55 16 43 H 0.13 -0.32 7.39 -2.39 -0.02 -0.33 16 Total: 0.00 -23.69 376.10 1.07 -22.63 By element: Atomic # 1 Polarization: -11.28 SS G_CDS: -0.31 Total: -11.59 kcal Atomic # 6 Polarization: 6.72 SS G_CDS: 6.49 Total: 13.21 kcal Atomic # 7 Polarization: -3.97 SS G_CDS: -3.67 Total: -7.65 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: -2.99 Total: -16.86 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: 2.17 Total: 0.99 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.63 Total: -0.73 kcal Total: -23.69 1.07 -22.63 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.200 kcal (2) G-P(sol) polarization free energy of solvation -23.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.629 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds