Wall clock time and date at job start Sun Mar 7 2021 00:17:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45210 * 1 3 3 C 1.34228 * 116.99870 * 2 1 4 4 O 1.20829 * 119.99884 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99928 * 180.02562 * 3 2 1 6 6 N 1.46498 * 112.84813 * 324.05725 * 5 3 2 7 7 C 1.34773 * 120.00135 * 293.63789 * 6 5 3 8 8 O 1.21288 * 119.99959 * 354.99254 * 7 6 5 9 9 C 1.50701 * 120.00133 * 174.98875 * 7 6 5 10 10 N 1.46896 * 109.47007 * 180.02562 * 9 7 6 11 11 C 1.46897 * 111.00425 * 66.04508 * 10 9 7 12 12 C 1.39680 * 110.99906 * 190.00027 * 10 9 7 13 13 C 1.38889 * 120.07435 * 120.27366 * 12 10 9 14 14 C 1.50692 * 120.04182 * 0.02562 * 13 12 10 15 15 O 1.42901 * 109.47136 * 75.22929 * 14 13 12 16 16 Si 1.86299 * 109.47361 * 195.23110 * 14 13 12 17 17 C 1.38135 * 119.92123 * 180.23335 * 13 12 10 18 18 C 1.38264 * 120.07192 * 359.76205 * 17 13 12 19 19 C 1.50705 * 119.92117 * 179.97438 * 18 17 13 20 20 F 1.39893 * 109.47058 * 179.97438 * 19 18 17 21 21 F 1.39899 * 109.47190 * 299.98460 * 19 18 17 22 22 F 1.39905 * 109.46670 * 59.98254 * 19 18 17 23 23 C 1.38309 * 120.15331 * 359.97438 * 18 17 13 24 24 C 1.38075 * 120.07238 * 359.97438 * 23 18 17 25 25 C 1.53784 * 113.61355 * 192.86290 * 5 3 2 26 26 C 1.53788 * 87.07938 * 270.80044 * 25 5 3 27 27 H 1.08997 * 113.61714 * 89.20054 * 26 25 5 28 28 O 1.42898 * 113.61298 * 220.02266 * 26 25 5 29 29 C 1.42895 * 114.00211 * 209.99949 * 28 26 25 30 30 C 1.53781 * 87.08178 * 334.56706 * 26 25 5 31 31 H 1.09000 * 109.46904 * 300.00067 * 1 2 3 32 32 H 1.08992 * 109.46938 * 60.00477 * 1 2 3 33 33 H 1.08999 * 109.46530 * 180.02562 * 1 2 3 34 34 H 0.97002 * 120.00066 * 113.64075 * 6 5 3 35 35 H 1.08993 * 109.47462 * 60.00241 * 9 7 6 36 36 H 1.09000 * 109.46661 * 300.00225 * 9 7 6 37 37 H 1.09000 * 109.47679 * 183.95132 * 11 10 9 38 38 H 1.09002 * 109.47394 * 303.95380 * 11 10 9 39 39 H 1.09004 * 109.46811 * 63.95386 * 11 10 9 40 40 H 1.09002 * 109.46896 * 315.23506 * 14 13 12 41 41 H 0.96705 * 113.99702 * 180.02562 * 15 14 13 42 42 H 1.48504 * 110.00218 * 178.67735 * 16 14 13 43 43 H 1.48493 * 110.00020 * 299.99790 * 16 14 13 44 44 H 1.07994 * 119.96188 * 179.75089 * 17 13 12 45 45 H 1.07996 * 119.96076 * 180.02562 * 23 18 17 46 46 H 1.08005 * 120.03398 * 180.02562 * 24 23 18 47 47 H 1.08995 * 113.61368 * 25.34251 * 25 5 3 48 48 H 1.08996 * 113.61078 * 156.17000 * 25 5 3 49 49 H 1.09003 * 109.47000 * 300.00160 * 29 28 26 50 50 H 1.09004 * 109.46992 * 59.99143 * 29 28 26 51 51 H 1.08995 * 109.47497 * 179.97438 * 29 28 26 52 52 H 1.09001 * 113.61532 * 270.88651 * 30 26 25 53 53 H 1.08999 * 113.61837 * 139.98205 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 7 4.1920 0.2130 0.7914 7 6 4.0243 0.1816 2.1283 8 8 3.4325 1.0812 2.6865 9 6 4.5720 -0.9712 2.9295 10 7 4.2599 -0.7716 4.3510 11 6 2.8115 -0.8393 4.5866 12 6 4.9402 -1.6957 5.1474 13 6 5.8259 -1.2554 6.1224 14 6 6.0541 0.2206 6.3232 15 8 4.9321 0.7880 7.0023 16 14 7.5922 0.4782 7.3424 17 6 6.5006 -2.1721 6.9050 18 6 6.2914 -3.5265 6.7219 19 6 7.0298 -4.5237 7.5772 20 9 6.6555 -5.8206 7.2098 21 9 8.4076 -4.3659 7.3933 22 9 6.7114 -4.3100 8.9227 23 6 5.4059 -3.9682 5.7555 24 6 4.7274 -3.0572 4.9705 25 6 4.1098 2.6789 0.3132 26 6 4.0435 2.9564 -1.1980 27 1 3.0860 3.3607 -1.5262 28 8 5.1588 3.7002 -1.6928 29 6 4.8538 4.5251 -2.8190 30 6 4.1760 1.4381 -1.4030 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5137 -0.8900 33 1 -0.3632 -1.0277 0.0005 34 1 4.7269 -0.4675 0.3536 35 1 5.6528 -1.0239 2.7985 36 1 4.1186 -1.9008 2.5853 37 1 2.6029 -0.6189 5.6335 38 1 2.3060 -0.1096 3.9540 39 1 2.4508 -1.8396 4.3470 40 1 6.1750 0.7046 5.3541 41 1 5.0103 1.7380 7.1653 42 1 7.8460 1.9305 7.5206 43 1 7.4399 -0.1770 8.6662 44 1 7.1925 -1.8305 7.6606 45 1 5.2445 -5.0268 5.6154 46 1 4.0358 -3.4028 4.2164 47 1 3.4249 3.2911 0.8998 48 1 5.1234 2.6752 0.7137 49 1 4.4933 3.9028 -3.6382 50 1 4.0833 5.2454 -2.5438 51 1 5.7517 5.0566 -3.1340 52 1 5.2084 1.0954 -1.4728 53 1 3.5447 1.0485 -2.2016 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:33 Heat of formation + Delta-G solvation = -246.841802 kcal Electronic energy + Delta-G solvation = -44723.648259 eV Core-core repulsion = 38536.078553 eV Total energy + Delta-G solvation = -6187.569706 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 433.164 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -51.20722 -48.73207 -48.67037 -42.60542 -41.60172 -40.56439 -39.86989 -37.91399 -37.74314 -37.64136 -37.01357 -34.36176 -33.14045 -32.09215 -29.86770 -29.02236 -27.84095 -27.57284 -27.09447 -26.97263 -25.98066 -24.97924 -23.54456 -23.01533 -21.99053 -21.42260 -20.79801 -19.53222 -19.50484 -19.29772 -19.23568 -18.54069 -18.47005 -18.18445 -17.70707 -17.51558 -17.30336 -17.07315 -16.91135 -16.38198 -16.17924 -16.05624 -16.00624 -15.62630 -15.58769 -15.40119 -15.16898 -15.11431 -15.08491 -15.00727 -14.84370 -14.83009 -14.63902 -14.59804 -14.45839 -14.01015 -13.91505 -13.79072 -13.70994 -13.58560 -13.39419 -13.38851 -13.05838 -12.97634 -12.78283 -12.63645 -12.53690 -12.31266 -12.22817 -12.00858 -11.95637 -11.92606 -11.78853 -10.90907 -10.59336 -10.41434 -10.35367 -10.19407 -10.07078 -9.56750 -4.99998 -0.31785 0.03331 0.81772 1.25614 1.34309 1.52904 1.59452 1.63458 1.77706 1.88843 2.17531 2.60754 2.70389 2.82981 2.93930 3.07213 3.18997 3.33711 3.42592 3.44490 3.52684 3.66591 3.71635 3.79391 3.97492 4.03739 4.10718 4.14790 4.17385 4.20453 4.22686 4.35729 4.39732 4.42074 4.47535 4.48672 4.53406 4.54370 4.58273 4.60251 4.67975 4.69142 4.78463 4.81718 4.87346 4.93561 5.00481 5.00978 5.16174 5.18970 5.25500 5.43122 5.65598 6.14456 6.15964 6.42633 6.51016 6.59977 7.18111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.350 6.350 3 C 0.475 3.525 4 O -0.525 6.525 5 C 0.160 3.840 6 N -0.694 5.694 7 C 0.516 3.484 8 O -0.550 6.550 9 C 0.039 3.961 10 N -0.498 5.498 11 C 0.036 3.964 12 C 0.142 3.858 13 C -0.060 4.060 14 C -0.059 4.059 15 O -0.547 6.547 16 Si 0.742 3.258 17 C -0.070 4.070 18 C -0.187 4.187 19 C 0.508 3.492 20 F -0.175 7.175 21 F -0.176 7.176 22 F -0.187 7.187 23 C -0.051 4.051 24 C -0.141 4.141 25 C -0.113 4.113 26 C 0.060 3.940 27 H 0.090 0.910 28 O -0.385 6.385 29 C 0.021 3.979 30 C -0.121 4.121 31 H 0.052 0.948 32 H 0.066 0.934 33 H 0.134 0.866 34 H 0.428 0.572 35 H 0.137 0.863 36 H 0.103 0.897 37 H 0.057 0.943 38 H 0.072 0.928 39 H 0.046 0.954 40 H 0.092 0.908 41 H 0.390 0.610 42 H -0.286 1.286 43 H -0.294 1.294 44 H 0.138 0.862 45 H 0.160 0.840 46 H 0.161 0.839 47 H 0.063 0.937 48 H 0.112 0.888 49 H 0.056 0.944 50 H 0.042 0.958 51 H 0.099 0.901 52 H 0.142 0.858 53 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.200 -4.603 -9.059 10.397 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.266 6.266 3 C 0.317 3.683 4 O -0.413 6.413 5 C 0.070 3.930 6 N -0.352 5.352 7 C 0.304 3.696 8 O -0.426 6.426 9 C -0.089 4.089 10 N -0.219 5.219 11 C -0.110 4.110 12 C 0.048 3.952 13 C -0.061 4.061 14 C -0.169 4.169 15 O -0.356 6.356 16 Si 0.648 3.352 17 C -0.088 4.088 18 C -0.188 4.188 19 C 0.454 3.546 20 F -0.156 7.156 21 F -0.157 7.157 22 F -0.168 7.168 23 C -0.070 4.070 24 C -0.161 4.161 25 C -0.151 4.151 26 C 0.002 3.998 27 H 0.108 0.892 28 O -0.304 6.304 29 C -0.075 4.075 30 C -0.159 4.159 31 H 0.070 0.930 32 H 0.085 0.915 33 H 0.152 0.848 34 H 0.268 0.732 35 H 0.154 0.846 36 H 0.121 0.879 37 H 0.076 0.924 38 H 0.091 0.909 39 H 0.065 0.935 40 H 0.110 0.890 41 H 0.240 0.760 42 H -0.212 1.212 43 H -0.222 1.222 44 H 0.156 0.844 45 H 0.177 0.823 46 H 0.179 0.821 47 H 0.081 0.919 48 H 0.131 0.869 49 H 0.074 0.926 50 H 0.061 0.939 51 H 0.118 0.882 52 H 0.160 0.840 53 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 1.991 -3.513 -7.746 8.735 hybrid contribution -1.589 0.181 0.395 1.647 sum 0.402 -3.333 -7.351 8.081 Atomic orbital electron populations 1.23558 0.74818 1.05826 1.02312 1.86484 1.24729 1.32135 1.83230 1.23696 0.91637 0.81623 0.71376 1.90685 1.67079 1.37524 1.46011 1.20832 0.84480 0.90823 0.96855 1.45585 1.53295 1.30191 1.06092 1.20987 0.78885 0.87613 0.82163 1.90763 1.42269 1.38908 1.70633 1.22192 1.04695 0.95879 0.86176 1.59040 1.09156 1.49075 1.04597 1.22427 0.85239 1.00889 1.02449 1.18811 0.93258 0.89683 0.93415 1.19188 0.97121 0.94047 0.95757 1.24650 0.97487 0.92035 1.02687 1.86534 1.41184 1.28564 1.79281 0.94684 0.81027 0.79562 0.79928 1.20817 0.98623 0.91491 0.97870 1.19914 1.04015 0.93116 1.01796 1.18368 0.77531 0.80321 0.78364 1.93173 1.91164 1.40027 1.91278 1.93229 1.32019 1.95475 1.95023 1.93222 1.92652 1.94746 1.36172 1.21150 0.92099 1.02019 0.91734 1.21913 1.00774 0.92173 1.01230 1.23422 1.02617 0.92482 0.96583 1.23582 0.90456 0.91727 0.94067 0.89227 1.87907 1.33761 1.60118 1.48614 1.23009 1.02680 0.93988 0.87774 1.23816 1.04526 0.95835 0.91689 0.92958 0.91503 0.84804 0.73163 0.84563 0.87941 0.92414 0.90927 0.93543 0.89045 0.76037 1.21242 1.22163 0.84437 0.82257 0.82102 0.91860 0.86932 0.92576 0.93899 0.88245 0.84028 0.88163 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.35 -0.69 10.42 -51.40 -0.54 -1.23 16 3 C 0.47 2.46 6.45 71.24 0.46 2.92 16 4 O -0.53 -6.20 15.12 21.95 0.33 -5.86 16 5 C 0.16 -0.11 1.11 3.39 0.00 -0.11 16 6 N -0.69 4.00 5.13 -423.91 -2.17 1.83 16 7 C 0.52 -0.50 7.17 87.66 0.63 0.13 16 8 O -0.55 -4.91 13.37 -3.05 -0.04 -4.95 16 9 C 0.04 -0.27 5.03 85.56 0.43 0.17 16 10 N -0.50 0.27 3.71 -724.45 -2.69 -2.42 16 11 C 0.04 0.07 9.02 127.69 1.15 1.22 16 12 C 0.14 -0.17 4.66 38.21 0.18 0.01 16 13 C -0.06 -0.07 5.31 -19.74 -0.10 -0.18 16 14 C -0.06 -0.07 2.33 71.23 0.17 0.10 16 15 O -0.55 -2.71 12.86 -148.98 -1.92 -4.63 16 16 Si 0.74 0.06 30.20 68.60 2.07 2.13 16 17 C -0.07 -0.10 8.20 22.25 0.18 0.09 16 18 C -0.19 -0.08 5.37 -19.84 -0.11 -0.18 16 19 C 0.51 1.31 3.31 71.24 0.24 1.55 16 20 F -0.18 -0.37 15.96 44.97 0.72 0.35 16 21 F -0.18 -0.56 17.24 44.97 0.78 0.21 16 22 F -0.19 -1.12 17.23 44.97 0.78 -0.35 16 23 C -0.05 0.19 9.42 22.25 0.21 0.40 16 24 C -0.14 0.72 8.66 22.40 0.19 0.91 16 25 C -0.11 -0.35 6.15 31.12 0.19 -0.16 16 26 C 0.06 0.04 3.92 31.12 0.12 0.16 16 27 H 0.09 0.21 7.35 -2.39 -0.02 0.20 16 28 O -0.39 -0.75 10.71 -148.98 -1.60 -2.35 16 29 C 0.02 -0.05 10.85 113.37 1.23 1.18 16 30 C -0.12 0.68 7.21 31.12 0.22 0.90 16 31 H 0.05 0.08 8.13 -2.39 -0.02 0.06 16 32 H 0.07 -0.10 8.13 -2.39 -0.02 -0.12 16 33 H 0.13 -1.04 8.14 -2.39 -0.02 -1.06 16 34 H 0.43 -5.85 8.71 -92.71 -0.81 -6.66 16 35 H 0.14 -1.56 8.06 -2.39 -0.02 -1.58 16 36 H 0.10 -1.23 7.48 -2.39 -0.02 -1.24 16 37 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 38 H 0.07 0.46 5.83 -2.39 -0.01 0.45 16 39 H 0.05 -0.12 7.34 -2.39 -0.02 -0.14 16 40 H 0.09 -0.02 7.77 -2.39 -0.02 -0.04 16 41 H 0.39 -0.45 8.74 -74.05 -0.65 -1.10 16 42 H -0.29 -1.35 7.11 99.48 0.71 -0.64 16 43 H -0.29 -1.97 6.75 99.48 0.67 -1.30 16 44 H 0.14 0.18 4.90 -2.91 -0.01 0.16 16 45 H 0.16 -1.14 7.15 -2.91 -0.02 -1.16 16 46 H 0.16 -1.66 7.14 -2.91 -0.02 -1.68 16 47 H 0.06 0.61 7.64 -2.39 -0.02 0.59 16 48 H 0.11 0.24 8.14 -2.39 -0.02 0.22 16 49 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 50 H 0.04 -0.08 8.14 -2.39 -0.02 -0.10 16 51 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 52 H 0.14 -1.41 8.14 -2.39 -0.02 -1.43 16 53 H 0.10 -0.77 8.10 -2.39 -0.02 -0.79 16 Total: 0.00 -26.70 450.00 1.87 -24.84 By element: Atomic # 1 Polarization: -17.37 SS G_CDS: -0.45 Total: -17.82 kcal Atomic # 6 Polarization: 3.65 SS G_CDS: 6.59 Total: 10.25 kcal Atomic # 7 Polarization: 4.27 SS G_CDS: -4.86 Total: -0.59 kcal Atomic # 8 Polarization: -15.27 SS G_CDS: -3.76 Total: -19.02 kcal Atomic # 9 Polarization: -2.05 SS G_CDS: 2.27 Total: 0.22 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: 2.07 Total: 2.13 kcal Total: -26.70 1.87 -24.84 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.006 kcal (2) G-P(sol) polarization free energy of solvation -26.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -248.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds