Wall clock time and date at job start Sun Mar 7 2021 00:17:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34233 * 116.99929 * 2 1 4 4 O 1.20830 * 119.99593 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00037 * 180.02562 * 3 2 1 6 6 N 1.46496 * 112.84885 * 334.67032 * 5 3 2 7 7 C 1.34774 * 120.00345 * 50.33296 * 6 5 3 8 8 O 1.21698 * 119.99664 * 0.02562 * 7 6 5 9 9 C 1.46676 * 120.00472 * 179.97438 * 7 6 5 10 10 C 1.37873 * 126.23694 * 180.02562 * 9 7 6 11 11 C 1.39835 * 107.08545 * 179.97438 * 10 9 7 12 12 C 1.35445 * 107.86575 * 0.02562 * 11 10 9 13 13 C 1.50703 * 125.56433 * 179.97438 * 12 11 10 14 14 O 1.42899 * 109.47139 * 120.02737 * 13 12 11 15 15 Si 1.86297 * 109.47153 * 0.02562 * 13 12 11 16 16 N 1.35539 * 108.87398 * 359.97438 * 12 11 10 17 17 C 1.53776 * 113.61219 * 203.47381 * 5 3 2 18 18 C 1.53779 * 87.08350 * 270.79883 * 17 5 3 19 19 H 1.09001 * 113.61459 * 89.19876 * 18 17 5 20 20 O 1.42894 * 113.61811 * 220.02158 * 18 17 5 21 21 C 1.42902 * 114.00274 * 209.99984 * 20 18 17 22 22 C 1.53780 * 113.61348 * 105.86624 * 5 3 2 23 23 H 1.09003 * 109.46878 * 179.97438 * 1 2 3 24 24 H 1.08999 * 109.46892 * 299.99315 * 1 2 3 25 25 H 1.08997 * 109.47692 * 59.99885 * 1 2 3 26 26 H 0.96997 * 120.00158 * 230.33094 * 6 5 3 27 27 H 1.07996 * 126.45296 * 0.24618 * 10 9 7 28 28 H 1.08001 * 126.06221 * 180.02562 * 11 10 9 29 29 H 1.09006 * 109.46894 * 240.02634 * 13 12 11 30 30 H 0.96704 * 113.99441 * 180.02562 * 14 13 12 31 31 H 1.48504 * 110.00022 * 59.99718 * 15 13 12 32 32 H 1.48492 * 110.00214 * 181.31928 * 15 13 12 33 33 H 0.96995 * 125.67477 * 179.97438 * 16 12 11 34 34 H 1.08994 * 113.61719 * 25.34956 * 17 5 3 35 35 H 1.09004 * 113.61301 * 156.16615 * 17 5 3 36 36 H 1.09003 * 109.46947 * 59.99527 * 21 20 18 37 37 H 1.08992 * 109.47551 * 179.97438 * 21 20 18 38 38 H 1.09005 * 109.46972 * 299.99884 * 21 20 18 39 39 H 1.08995 * 113.61340 * 203.75031 * 22 5 3 40 40 H 1.09004 * 113.61450 * 334.65058 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1985 0.0860 0.5765 7 6 3.8372 -1.1417 0.1538 8 8 2.9862 -1.2626 -0.7076 9 6 4.4706 -2.3320 0.7312 10 6 4.2014 -3.6420 0.3961 11 6 5.0284 -4.4464 1.1862 12 6 5.7714 -3.6320 1.9731 13 6 6.7969 -4.0835 2.9809 14 8 8.0739 -3.5427 2.6361 15 14 6.8901 -5.9442 2.9811 16 7 5.4422 -2.3446 1.7061 17 6 4.1140 2.5977 0.5607 18 6 4.0335 3.1484 -0.8728 19 1 3.0732 3.6053 -1.1118 20 8 5.1446 3.9714 -1.2332 21 6 4.8295 4.9892 -2.1855 22 6 4.1607 1.6921 -1.3561 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 4.8771 0.1824 1.2628 27 1 3.4894 -3.9825 -0.3411 28 1 5.0676 -5.5256 1.1716 29 1 6.5100 -3.7340 3.9727 30 1 8.7839 -3.7932 3.2430 31 1 7.2802 -6.4334 1.6343 32 1 7.8748 -6.4033 3.9932 33 1 5.8268 -1.5625 2.1318 34 1 3.4354 3.0909 1.2566 35 1 5.1315 2.5213 0.9441 36 1 4.0624 5.6459 -1.7750 37 1 5.7248 5.5703 -2.4060 38 1 4.4606 4.5278 -3.1016 39 1 5.1915 1.3681 -1.4991 40 1 3.5198 1.4554 -2.2054 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:17:38 Heat of formation + Delta-G solvation = -98.323459 kcal Electronic energy + Delta-G solvation = -26681.487427 eV Core-core repulsion = 22659.096503 eV Total energy + Delta-G solvation = -4022.390924 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.129 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.66287 -42.15513 -40.15217 -39.59740 -37.91699 -37.66468 -36.86840 -34.37368 -32.09962 -31.46921 -29.16550 -27.94040 -27.26305 -26.97420 -25.67618 -23.66118 -22.60820 -21.54786 -21.02515 -20.63736 -19.65902 -19.01073 -18.73302 -17.86109 -17.56388 -17.25616 -16.98493 -16.70021 -16.22472 -16.14953 -15.85515 -15.37775 -15.10721 -14.87442 -14.82008 -14.55969 -14.29926 -14.07769 -13.79437 -13.66848 -13.61356 -13.51518 -13.25008 -12.92873 -12.79459 -12.56052 -12.27214 -12.11038 -12.00835 -11.62211 -11.51187 -10.95181 -10.74470 -10.61380 -10.30564 -10.01926 -9.19369 -4.99790 0.40891 1.04785 1.10186 1.53721 1.60573 1.68121 1.81740 1.89003 2.13828 2.44366 2.77276 2.95686 3.09255 3.22475 3.48220 3.68129 3.69420 3.84244 4.02613 4.07928 4.29759 4.31724 4.33543 4.38620 4.43009 4.44808 4.45616 4.47978 4.62256 4.70471 4.73772 4.76430 4.79288 5.03796 5.10508 5.15952 5.46396 5.65545 5.86904 6.12106 6.18602 6.22941 6.39293 6.76041 7.15392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.309 6.309 3 C 0.477 3.523 4 O -0.504 6.504 5 C 0.157 3.843 6 N -0.719 5.719 7 C 0.587 3.413 8 O -0.480 6.480 9 C -0.047 4.047 10 C -0.096 4.096 11 C -0.197 4.197 12 C 0.069 3.931 13 C -0.062 4.062 14 O -0.542 6.542 15 Si 0.713 3.287 16 N -0.525 5.525 17 C -0.118 4.118 18 C 0.068 3.932 19 H 0.106 0.894 20 O -0.372 6.372 21 C 0.028 3.972 22 C -0.143 4.143 23 H 0.102 0.898 24 H 0.059 0.941 25 H 0.062 0.938 26 H 0.401 0.599 27 H 0.154 0.846 28 H 0.152 0.848 29 H 0.078 0.922 30 H 0.385 0.615 31 H -0.250 1.250 32 H -0.260 1.260 33 H 0.415 0.585 34 H 0.095 0.905 35 H 0.113 0.887 36 H 0.046 0.954 37 H 0.089 0.911 38 H 0.044 0.956 39 H 0.112 0.888 40 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.320 -1.223 4.212 4.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.223 6.223 3 C 0.319 3.681 4 O -0.392 6.392 5 C 0.068 3.932 6 N -0.374 5.374 7 C 0.374 3.626 8 O -0.352 6.352 9 C -0.160 4.160 10 C -0.122 4.122 11 C -0.222 4.222 12 C -0.049 4.049 13 C -0.171 4.171 14 O -0.350 6.350 15 Si 0.612 3.388 16 N -0.121 5.121 17 C -0.156 4.156 18 C 0.009 3.991 19 H 0.123 0.877 20 O -0.291 6.291 21 C -0.069 4.069 22 C -0.182 4.182 23 H 0.121 0.879 24 H 0.078 0.922 25 H 0.081 0.919 26 H 0.237 0.763 27 H 0.172 0.828 28 H 0.169 0.831 29 H 0.096 0.904 30 H 0.233 0.767 31 H -0.174 1.174 32 H -0.185 1.185 33 H 0.253 0.747 34 H 0.114 0.886 35 H 0.131 0.869 36 H 0.064 0.936 37 H 0.108 0.892 38 H 0.063 0.937 39 H 0.131 0.869 40 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 0.817 -1.350 3.072 3.454 hybrid contribution 1.141 1.193 0.748 1.812 sum 1.959 -0.157 3.820 4.296 Atomic orbital electron populations 1.23343 0.77114 1.03939 1.02153 1.87011 1.22563 1.30609 1.82141 1.23004 0.90223 0.82435 0.72484 1.90691 1.66070 1.36628 1.45798 1.20986 0.86776 0.86528 0.98884 1.45726 1.43490 1.04555 1.43632 1.17049 0.81830 0.81252 0.82437 1.90914 1.29514 1.85129 1.29688 1.20356 1.00233 0.95466 0.99976 1.21284 1.00636 0.89691 1.00576 1.20641 1.01706 0.99442 1.00368 1.19842 0.99858 0.83761 1.01400 1.24606 0.82997 1.12335 0.97193 1.86570 1.17657 1.74461 1.56277 0.94337 0.89799 0.73101 0.81564 1.41913 1.31102 1.07867 1.31265 1.23503 1.03137 0.90836 0.98130 1.23582 0.91247 0.89964 0.94325 0.87672 1.87914 1.33460 1.45986 1.61693 1.22867 1.02027 0.90348 0.91611 1.23965 1.03182 0.95827 0.95246 0.87912 0.92203 0.91923 0.76346 0.82819 0.83095 0.90422 0.76667 1.17354 1.18491 0.74730 0.88603 0.86898 0.93563 0.89247 0.93705 0.86938 0.89693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.31 -1.28 6.30 -47.62 -0.30 -1.58 16 3 C 0.48 1.74 6.98 36.01 0.25 1.99 16 4 O -0.50 -2.58 14.99 -18.75 -0.28 -2.86 16 5 C 0.16 0.16 1.22 -132.16 -0.16 0.00 16 6 N -0.72 0.10 5.31 -49.22 -0.26 -0.16 16 7 C 0.59 1.41 7.14 -12.86 -0.09 1.32 16 8 O -0.48 -2.59 13.41 -20.04 -0.27 -2.85 16 9 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 10 C -0.10 -0.17 10.65 -39.12 -0.42 -0.58 16 11 C -0.20 -0.10 9.32 -39.98 -0.37 -0.47 16 12 C 0.07 0.01 6.51 -81.95 -0.53 -0.53 16 13 C -0.06 0.11 3.07 36.01 0.11 0.22 16 14 O -0.54 0.39 12.86 -35.23 -0.45 -0.06 16 15 Si 0.71 -1.63 30.54 -169.99 -5.19 -6.82 16 16 N -0.53 0.22 5.99 -5.70 -0.03 0.18 16 17 C -0.12 0.06 6.96 -25.92 -0.18 -0.12 16 18 C 0.07 0.06 3.90 -25.83 -0.10 -0.04 16 19 H 0.11 0.14 7.06 -51.93 -0.37 -0.22 16 20 O -0.37 -0.60 10.72 -35.23 -0.38 -0.98 16 21 C 0.03 -0.01 10.85 101.05 1.10 1.09 16 22 C -0.14 -0.15 7.29 -25.83 -0.19 -0.33 16 23 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 24 H 0.06 0.07 8.13 -51.93 -0.42 -0.36 16 25 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 26 H 0.40 -1.23 7.77 -40.82 -0.32 -1.55 16 27 H 0.15 0.19 8.06 -52.49 -0.42 -0.24 16 28 H 0.15 -0.23 6.17 -52.49 -0.32 -0.56 16 29 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 30 H 0.38 -1.76 8.74 45.56 0.40 -1.36 16 31 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.26 0.11 7.11 56.52 0.40 0.51 16 33 H 0.42 -1.20 8.19 -40.82 -0.33 -1.53 16 34 H 0.10 -0.03 7.84 -51.93 -0.41 -0.44 16 35 H 0.11 -0.25 8.13 -51.93 -0.42 -0.67 16 36 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 37 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.11 0.07 8.14 -51.93 -0.42 -0.35 16 40 H 0.08 0.16 8.09 -51.93 -0.42 -0.26 16 LS Contribution 340.81 15.07 5.14 5.14 Total: 0.00 -9.56 340.81 -7.32 -16.87 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -5.19 Total: -9.87 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -0.10 Total: 3.00 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.30 Total: 0.02 kcal Atomic # 8 Polarization: -6.66 SS G_CDS: -1.68 Total: -8.34 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.19 Total: -6.82 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -9.56 -7.32 -16.87 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.452 kcal (2) G-P(sol) polarization free energy of solvation -9.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds