Wall clock time and date at job start Sun Mar 7 2021 00:18:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34236 * 116.99757 * 2 1 4 4 O 1.20830 * 119.99893 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99867 * 179.97438 * 3 2 1 6 6 N 1.46507 * 112.85031 * 35.51799 * 5 3 2 7 7 C 1.34778 * 119.99472 * 66.98797 * 6 5 3 8 8 O 1.21283 * 120.00555 * 354.95029 * 7 6 5 9 9 C 1.50703 * 119.99443 * 174.95714 * 7 6 5 10 10 N 1.46499 * 109.47033 * 179.97438 * 9 7 6 11 11 C 1.36834 * 125.06341 * 264.97291 * 10 9 7 12 12 C 1.34236 * 109.93796 * 180.02562 * 11 10 9 13 13 C 1.50694 * 126.49866 * 179.97438 * 12 11 10 14 14 O 1.42908 * 109.47290 * 255.02645 * 13 12 11 15 15 Si 1.86304 * 109.47286 * 15.02632 * 13 12 11 16 16 C 1.46495 * 106.99853 * 0.24464 * 12 11 10 17 17 C 1.39593 * 134.03352 * 179.76425 * 16 12 11 18 18 C 1.36663 * 119.76102 * 179.97438 * 17 16 12 19 19 C 1.38784 * 120.52909 * 0.02562 * 18 17 16 20 20 C 1.37791 * 120.66842 * 359.63276 * 19 18 17 21 21 C 1.37696 * 125.06108 * 85.01418 * 10 9 7 22 22 C 1.53783 * 113.69526 * 264.24840 * 5 3 2 23 23 C 1.53782 * 87.08013 * 220.00988 * 22 5 3 24 24 H 1.08997 * 113.60919 * 139.98336 * 23 22 5 25 25 O 1.42898 * 113.61191 * 270.87923 * 23 22 5 26 26 C 1.42896 * 114.00178 * 247.49799 * 25 23 22 27 27 C 1.53781 * 113.61124 * 166.71156 * 5 3 2 28 28 H 1.09000 * 109.47173 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47340 * 299.99686 * 1 2 3 30 30 H 1.09001 * 109.46764 * 60.00217 * 1 2 3 31 31 H 0.96992 * 119.99892 * 246.99226 * 6 5 3 32 32 H 1.08993 * 109.47473 * 59.99528 * 9 7 6 33 33 H 1.09003 * 109.47075 * 299.99733 * 9 7 6 34 34 H 1.08002 * 125.02723 * 0.05713 * 11 10 9 35 35 H 1.09004 * 109.47161 * 135.02649 * 13 12 11 36 36 H 0.96698 * 113.99660 * 59.99767 * 14 13 12 37 37 H 1.48501 * 109.99894 * 180.02562 * 15 13 12 38 38 H 1.48492 * 109.99767 * 301.31714 * 15 13 12 39 39 H 1.08005 * 120.11862 * 359.96971 * 17 16 12 40 40 H 1.08004 * 119.73504 * 179.97438 * 18 17 16 41 41 H 1.08009 * 119.66393 * 180.02562 * 19 18 17 42 42 H 1.07997 * 120.11296 * 179.89431 * 20 19 18 43 43 H 1.09001 * 113.61075 * 334.56178 * 22 5 3 44 44 H 1.09003 * 113.61063 * 105.45823 * 22 5 3 45 45 H 1.08999 * 109.47271 * 300.00256 * 26 25 23 46 46 H 1.08998 * 109.46871 * 60.00386 * 26 25 23 47 47 H 1.08998 * 109.47219 * 180.02562 * 26 25 23 48 48 H 1.09005 * 113.61322 * 254.61494 * 27 5 3 49 49 H 1.08990 * 113.61757 * 25.52260 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1923 0.2072 -0.7833 7 6 4.0355 0.1732 -2.1215 8 8 3.3027 0.9712 -2.6668 9 6 4.7706 -0.8565 -2.9403 10 7 4.4339 -0.6860 -4.3558 11 6 3.4559 -1.3752 -5.0197 12 6 3.4078 -0.9806 -6.3019 13 6 2.4708 -1.4958 -7.3637 14 8 3.1832 -2.3641 -8.2473 15 14 1.0774 -2.4353 -6.5596 16 6 4.4434 0.0410 -6.4747 17 6 4.8776 0.8093 -7.5563 18 6 5.8980 1.7026 -7.3878 19 6 6.5068 1.8520 -6.1496 20 6 6.0894 1.1089 -5.0669 21 6 5.0551 0.1912 -5.2165 22 6 4.1755 1.4485 1.4019 23 6 5.1714 2.4298 0.7614 24 1 5.3787 3.3052 1.3768 25 8 6.3573 1.8022 0.2696 26 6 7.5413 2.1522 0.9889 27 6 4.1097 2.6766 -0.3234 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 4.7194 -0.4752 -0.3392 32 1 4.4786 -1.8551 -2.6154 33 1 5.8447 -0.7297 -2.8041 34 1 2.8169 -2.1252 -4.5775 35 1 2.0648 -0.6564 -7.9283 36 1 3.5726 -3.1348 -7.8120 37 1 0.1465 -2.9492 -7.5963 38 1 1.6200 -3.5635 -5.7609 39 1 4.4088 0.6980 -8.5230 40 1 6.2338 2.2965 -8.2250 41 1 7.3118 2.5625 -6.0320 42 1 6.5707 1.2311 -4.1079 43 1 3.4993 1.9172 2.1169 44 1 4.6426 0.5434 1.7900 45 1 7.6984 3.2291 0.9280 46 1 7.4319 1.8594 2.0331 47 1 8.3968 1.6354 0.5540 48 1 4.5238 2.7629 -1.3280 49 1 3.4157 3.4810 -0.0800 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:18:01 Heat of formation + Delta-G solvation = -76.168886 kcal Electronic energy + Delta-G solvation = -35967.206835 eV Core-core repulsion = 31250.022946 eV Total energy + Delta-G solvation = -4717.183889 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.63197 -42.22878 -40.57824 -39.81866 -38.00330 -37.71990 -37.52694 -36.96498 -34.44081 -33.81224 -31.32898 -30.09213 -29.56461 -28.77363 -27.93574 -27.20825 -26.51986 -25.53008 -23.63898 -22.89414 -22.56659 -21.81029 -20.59730 -20.50198 -19.18045 -18.75272 -18.38960 -18.12228 -17.65678 -17.41202 -17.30613 -17.18744 -16.79217 -16.28576 -16.26670 -16.14015 -15.93720 -15.72405 -15.42904 -15.27498 -14.87998 -14.66770 -14.53506 -14.34674 -14.23406 -13.97660 -13.92719 -13.63741 -13.49184 -13.39762 -13.20384 -13.03279 -12.66577 -12.56870 -12.41864 -12.27180 -12.25491 -12.16129 -11.84719 -11.75057 -11.59905 -11.57309 -11.07133 -10.81927 -10.38987 -10.32835 -10.28089 -8.98837 -8.49755 -4.84732 0.31469 0.82182 1.06382 1.31636 1.40545 1.44246 1.63621 1.73443 1.74333 2.02714 2.04087 2.39991 3.06198 3.09151 3.15230 3.36213 3.46673 3.55185 3.61444 3.69829 3.76763 3.87129 3.89983 4.02581 4.10239 4.17695 4.19216 4.26258 4.27362 4.29627 4.34969 4.39174 4.42175 4.51591 4.60820 4.61744 4.62716 4.63080 4.76220 4.84634 4.86339 4.94305 5.02883 5.15520 5.29697 5.38111 5.68636 5.84768 5.90324 5.93660 5.97236 6.13599 6.32802 6.40039 6.61952 6.72218 6.99313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.354 6.354 3 C 0.472 3.528 4 O -0.494 6.494 5 C 0.165 3.835 6 N -0.692 5.692 7 C 0.498 3.502 8 O -0.504 6.504 9 C 0.095 3.905 10 N -0.465 5.465 11 C 0.066 3.934 12 C -0.193 4.193 13 C -0.036 4.036 14 O -0.531 6.531 15 Si 0.681 3.319 16 C -0.086 4.086 17 C -0.065 4.065 18 C -0.146 4.146 19 C -0.097 4.097 20 C -0.126 4.126 21 C 0.110 3.890 22 C -0.144 4.144 23 C 0.067 3.933 24 H 0.091 0.909 25 O -0.364 6.364 26 C 0.028 3.972 27 C -0.122 4.122 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.065 0.935 31 H 0.411 0.589 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.168 0.832 35 H 0.114 0.886 36 H 0.372 0.628 37 H -0.256 1.256 38 H -0.260 1.260 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.124 0.876 42 H 0.116 0.884 43 H 0.113 0.887 44 H 0.097 0.903 45 H 0.046 0.954 46 H 0.045 0.955 47 H 0.089 0.911 48 H 0.094 0.906 49 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.483 -2.220 7.779 8.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.270 6.270 3 C 0.312 3.688 4 O -0.380 6.380 5 C 0.076 3.924 6 N -0.347 5.347 7 C 0.283 3.717 8 O -0.377 6.377 9 C -0.031 4.031 10 N -0.148 5.148 11 C -0.058 4.058 12 C -0.201 4.201 13 C -0.147 4.147 14 O -0.337 6.337 15 Si 0.582 3.418 16 C -0.090 4.090 17 C -0.084 4.084 18 C -0.165 4.165 19 C -0.116 4.116 20 C -0.147 4.147 21 C 0.005 3.995 22 C -0.182 4.182 23 C 0.009 3.991 24 H 0.109 0.891 25 O -0.282 6.282 26 C -0.068 4.068 27 C -0.160 4.160 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.084 0.916 31 H 0.247 0.753 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.185 0.815 35 H 0.132 0.868 36 H 0.219 0.781 37 H -0.180 1.180 38 H -0.185 1.185 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.142 0.858 42 H 0.134 0.866 43 H 0.131 0.869 44 H 0.115 0.885 45 H 0.064 0.936 46 H 0.063 0.937 47 H 0.108 0.892 48 H 0.113 0.887 49 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 2.164 -1.851 7.159 7.704 hybrid contribution 0.986 -0.784 0.398 1.321 sum 3.150 -2.635 7.557 8.601 Atomic orbital electron populations 1.23324 0.75986 1.03906 1.02784 1.86497 1.23670 1.33169 1.83661 1.23670 0.91221 0.81748 0.72144 1.90688 1.66186 1.36438 1.44678 1.21062 0.84712 0.91196 0.95437 1.45356 1.53965 1.29188 1.06219 1.21023 0.82399 0.86049 0.82278 1.90841 1.36167 1.39902 1.70817 1.21535 1.02013 0.99945 0.79594 1.43202 1.30804 1.34053 1.06751 1.21575 0.93270 0.98867 0.92135 1.20568 1.02382 1.02763 0.94372 1.24270 0.99109 0.97696 0.93622 1.86606 1.71973 1.38387 1.36715 0.95034 0.80566 0.83102 0.83122 1.18930 0.97944 0.99219 0.92901 1.20300 0.96200 0.94456 0.97448 1.20665 0.97951 1.00256 0.97596 1.20818 0.99675 0.98848 0.92264 1.19972 0.97543 0.97659 0.99489 1.18165 0.97217 0.94735 0.89341 1.23814 0.98658 1.02332 0.93370 1.22998 0.85392 0.95051 0.95667 0.89098 1.87890 1.14817 1.69030 1.56504 1.22885 0.87125 1.00388 0.96397 1.23571 0.96567 0.94260 1.01574 0.87922 0.91794 0.91619 0.75279 0.85964 0.86089 0.81517 0.86820 0.78051 1.18011 1.18475 0.85968 0.85983 0.85782 0.86623 0.86855 0.88484 0.93572 0.93656 0.89220 0.88711 0.86211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.69 10.42 -39.27 -0.41 -1.10 16 3 C 0.47 1.38 6.42 36.00 0.23 1.61 16 4 O -0.49 -2.83 15.66 -18.75 -0.29 -3.12 16 5 C 0.17 0.00 1.00 -132.16 -0.13 -0.13 16 6 N -0.69 1.06 4.53 -47.92 -0.22 0.85 16 7 C 0.50 0.33 7.38 -10.98 -0.08 0.24 16 8 O -0.50 -2.71 15.14 5.55 0.08 -2.62 16 9 C 0.10 -0.18 6.48 -5.19 -0.03 -0.21 16 10 N -0.46 -0.76 2.27 -115.71 -0.26 -1.02 16 11 C 0.07 0.09 9.89 -16.73 -0.17 -0.07 16 12 C -0.19 -0.54 5.57 -102.71 -0.57 -1.11 16 13 C -0.04 -0.07 3.06 36.00 0.11 0.04 16 14 O -0.53 -1.53 12.88 -35.23 -0.45 -1.98 16 15 Si 0.68 0.18 30.82 -169.99 -5.24 -5.05 16 16 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 17 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 18 C -0.15 -0.42 9.97 -39.95 -0.40 -0.82 16 19 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 20 C -0.13 -0.36 10.00 -39.43 -0.39 -0.76 16 21 C 0.11 0.41 6.80 -83.99 -0.57 -0.16 16 22 C -0.14 0.40 7.20 -25.92 -0.19 0.21 16 23 C 0.07 -0.14 4.37 -25.92 -0.11 -0.26 16 24 H 0.09 -0.31 7.87 -51.93 -0.41 -0.72 16 25 O -0.36 0.62 10.13 -35.23 -0.36 0.27 16 26 C 0.03 -0.10 10.85 101.05 1.10 1.00 16 27 C -0.12 -0.06 6.67 -25.92 -0.17 -0.23 16 28 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 31 H 0.41 -1.85 8.67 -40.82 -0.35 -2.21 16 32 H 0.12 -0.61 8.12 -51.93 -0.42 -1.03 16 33 H 0.12 -0.45 8.14 -51.93 -0.42 -0.88 16 34 H 0.17 -0.19 6.27 -52.49 -0.33 -0.52 16 35 H 0.11 0.20 7.96 -51.93 -0.41 -0.21 16 36 H 0.37 -0.07 8.70 45.56 0.40 0.33 16 37 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 38 H -0.26 -0.28 7.00 56.52 0.40 0.12 16 39 H 0.12 0.37 8.06 -52.48 -0.42 -0.05 16 40 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 41 H 0.12 0.04 8.06 -52.48 -0.42 -0.38 16 42 H 0.12 0.13 8.06 -52.49 -0.42 -0.29 16 43 H 0.11 -0.37 8.10 -51.93 -0.42 -0.79 16 44 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 45 H 0.05 -0.16 8.14 -51.93 -0.42 -0.59 16 46 H 0.04 -0.20 8.14 -51.93 -0.42 -0.62 16 47 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 48 H 0.09 0.24 7.41 -51.93 -0.38 -0.15 16 49 H 0.12 0.12 7.35 -51.93 -0.38 -0.27 16 LS Contribution 416.34 15.07 6.27 6.27 Total: 0.00 -11.91 416.34 -9.64 -21.56 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -6.99 Total: -12.13 kcal Atomic # 6 Polarization: -0.14 SS G_CDS: -1.78 Total: -1.92 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.48 Total: -0.17 kcal Atomic # 8 Polarization: -7.12 SS G_CDS: -1.43 Total: -8.55 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: -5.24 Total: -5.05 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -11.91 -9.64 -21.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.610 kcal (2) G-P(sol) polarization free energy of solvation -11.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.559 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds