Wall clock time and date at job start Sun Mar 7 2021 00:18:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34236 * 116.99757 * 2 1 4 4 O 1.20830 * 119.99893 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99867 * 179.97438 * 3 2 1 6 6 N 1.46507 * 112.85031 * 35.51799 * 5 3 2 7 7 C 1.34778 * 119.99472 * 66.98797 * 6 5 3 8 8 O 1.21283 * 120.00555 * 354.95029 * 7 6 5 9 9 C 1.50703 * 119.99443 * 174.95714 * 7 6 5 10 10 N 1.46499 * 109.47033 * 179.97438 * 9 7 6 11 11 C 1.36834 * 125.06341 * 264.97291 * 10 9 7 12 12 C 1.34236 * 109.93796 * 180.02562 * 11 10 9 13 13 C 1.50694 * 126.49866 * 179.97438 * 12 11 10 14 14 O 1.42908 * 109.47290 * 255.02645 * 13 12 11 15 15 Si 1.86304 * 109.47286 * 15.02632 * 13 12 11 16 16 C 1.46495 * 106.99853 * 0.24464 * 12 11 10 17 17 C 1.39593 * 134.03352 * 179.76425 * 16 12 11 18 18 C 1.36663 * 119.76102 * 179.97438 * 17 16 12 19 19 C 1.38784 * 120.52909 * 0.02562 * 18 17 16 20 20 C 1.37791 * 120.66842 * 359.63276 * 19 18 17 21 21 C 1.37696 * 125.06108 * 85.01418 * 10 9 7 22 22 C 1.53783 * 113.69526 * 264.24840 * 5 3 2 23 23 C 1.53782 * 87.08013 * 220.00988 * 22 5 3 24 24 H 1.08997 * 113.60919 * 139.98336 * 23 22 5 25 25 O 1.42898 * 113.61191 * 270.87923 * 23 22 5 26 26 C 1.42896 * 114.00178 * 247.49799 * 25 23 22 27 27 C 1.53781 * 113.61124 * 166.71156 * 5 3 2 28 28 H 1.09000 * 109.47173 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47340 * 299.99686 * 1 2 3 30 30 H 1.09001 * 109.46764 * 60.00217 * 1 2 3 31 31 H 0.96992 * 119.99892 * 246.99226 * 6 5 3 32 32 H 1.08993 * 109.47473 * 59.99528 * 9 7 6 33 33 H 1.09003 * 109.47075 * 299.99733 * 9 7 6 34 34 H 1.08002 * 125.02723 * 0.05713 * 11 10 9 35 35 H 1.09004 * 109.47161 * 135.02649 * 13 12 11 36 36 H 0.96698 * 113.99660 * 59.99767 * 14 13 12 37 37 H 1.48501 * 109.99894 * 180.02562 * 15 13 12 38 38 H 1.48492 * 109.99767 * 301.31714 * 15 13 12 39 39 H 1.08005 * 120.11862 * 359.96971 * 17 16 12 40 40 H 1.08004 * 119.73504 * 179.97438 * 18 17 16 41 41 H 1.08009 * 119.66393 * 180.02562 * 19 18 17 42 42 H 1.07997 * 120.11296 * 179.89431 * 20 19 18 43 43 H 1.09001 * 113.61075 * 334.56178 * 22 5 3 44 44 H 1.09003 * 113.61063 * 105.45823 * 22 5 3 45 45 H 1.08999 * 109.47271 * 300.00256 * 26 25 23 46 46 H 1.08998 * 109.46871 * 60.00386 * 26 25 23 47 47 H 1.08998 * 109.47219 * 180.02562 * 26 25 23 48 48 H 1.09005 * 113.61322 * 254.61494 * 27 5 3 49 49 H 1.08990 * 113.61757 * 25.52260 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1923 0.2072 -0.7833 7 6 4.0355 0.1732 -2.1215 8 8 3.3027 0.9712 -2.6668 9 6 4.7706 -0.8565 -2.9403 10 7 4.4339 -0.6860 -4.3558 11 6 3.4559 -1.3752 -5.0197 12 6 3.4078 -0.9806 -6.3019 13 6 2.4708 -1.4958 -7.3637 14 8 3.1832 -2.3641 -8.2473 15 14 1.0774 -2.4353 -6.5596 16 6 4.4434 0.0410 -6.4747 17 6 4.8776 0.8093 -7.5563 18 6 5.8980 1.7026 -7.3878 19 6 6.5068 1.8520 -6.1496 20 6 6.0894 1.1089 -5.0669 21 6 5.0551 0.1912 -5.2165 22 6 4.1755 1.4485 1.4019 23 6 5.1714 2.4298 0.7614 24 1 5.3787 3.3052 1.3768 25 8 6.3573 1.8022 0.2696 26 6 7.5413 2.1522 0.9889 27 6 4.1097 2.6766 -0.3234 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 4.7194 -0.4752 -0.3392 32 1 4.4786 -1.8551 -2.6154 33 1 5.8447 -0.7297 -2.8041 34 1 2.8169 -2.1252 -4.5775 35 1 2.0648 -0.6564 -7.9283 36 1 3.5726 -3.1348 -7.8120 37 1 0.1465 -2.9492 -7.5963 38 1 1.6200 -3.5635 -5.7609 39 1 4.4088 0.6980 -8.5230 40 1 6.2338 2.2965 -8.2250 41 1 7.3118 2.5625 -6.0320 42 1 6.5707 1.2311 -4.1079 43 1 3.4993 1.9172 2.1169 44 1 4.6426 0.5434 1.7900 45 1 7.6984 3.2291 0.9280 46 1 7.4319 1.8594 2.0331 47 1 8.3968 1.6354 0.5540 48 1 4.5238 2.7629 -1.3280 49 1 3.4157 3.4810 -0.0800 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14247462_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:18:00 Heat of formation + Delta-G solvation = -78.037336 kcal Electronic energy + Delta-G solvation = -35967.287857 eV Core-core repulsion = 31250.022946 eV Total energy + Delta-G solvation = -4717.264911 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.161 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.68591 -42.30843 -40.67700 -39.79837 -38.15544 -37.76687 -37.67931 -36.98168 -34.46618 -33.85395 -31.44423 -30.24610 -29.60321 -28.80984 -27.70040 -27.10634 -26.47961 -25.59607 -23.79333 -22.99208 -22.61103 -21.82064 -20.69596 -20.52152 -19.24656 -18.76037 -18.45964 -18.22296 -17.73997 -17.42479 -17.32496 -17.19254 -16.76765 -16.40958 -16.24839 -16.06076 -15.99262 -15.71061 -15.51567 -15.30495 -14.85732 -14.80109 -14.68422 -14.45113 -14.33123 -14.08129 -13.72527 -13.64962 -13.48337 -13.41024 -13.15224 -13.00008 -12.72595 -12.57844 -12.54225 -12.40300 -12.14894 -12.06300 -12.00172 -11.88699 -11.74156 -11.62660 -11.15439 -10.61923 -10.55804 -10.45716 -10.29307 -9.16322 -8.63985 -4.87745 0.14031 0.63198 0.91928 1.30103 1.33670 1.39951 1.56679 1.66504 1.71789 1.95435 2.05308 2.59014 2.94795 3.13269 3.23260 3.48757 3.50767 3.53533 3.66930 3.68768 3.79214 3.83496 4.02840 4.14152 4.19095 4.21621 4.23762 4.25177 4.30144 4.43856 4.49443 4.51556 4.57212 4.58812 4.61838 4.64614 4.70113 4.71420 4.76270 4.78681 4.82313 4.89219 4.96040 5.13730 5.21459 5.25497 5.51099 5.66433 5.73519 5.75089 6.16107 6.20810 6.22497 6.39933 6.57264 6.60077 7.06480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.355 6.355 3 C 0.467 3.533 4 O -0.533 6.533 5 C 0.159 3.841 6 N -0.675 5.675 7 C 0.498 3.502 8 O -0.558 6.558 9 C 0.093 3.907 10 N -0.465 5.465 11 C 0.074 3.926 12 C -0.215 4.215 13 C -0.050 4.050 14 O -0.552 6.552 15 Si 0.760 3.240 16 C -0.115 4.115 17 C -0.088 4.088 18 C -0.153 4.153 19 C -0.107 4.107 20 C -0.132 4.132 21 C 0.093 3.907 22 C -0.128 4.128 23 C 0.077 3.923 24 H 0.106 0.894 25 O -0.375 6.375 26 C 0.024 3.976 27 C -0.130 4.130 28 H 0.133 0.867 29 H 0.064 0.936 30 H 0.050 0.950 31 H 0.428 0.572 32 H 0.163 0.837 33 H 0.145 0.855 34 H 0.196 0.804 35 H 0.102 0.898 36 H 0.384 0.616 37 H -0.300 1.300 38 H -0.257 1.257 39 H 0.118 0.882 40 H 0.136 0.864 41 H 0.145 0.855 42 H 0.131 0.869 43 H 0.119 0.881 44 H 0.121 0.879 45 H 0.044 0.956 46 H 0.058 0.942 47 H 0.096 0.904 48 H 0.068 0.932 49 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.657 -3.869 10.242 11.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.270 6.270 3 C 0.310 3.690 4 O -0.421 6.421 5 C 0.069 3.931 6 N -0.331 5.331 7 C 0.284 3.716 8 O -0.435 6.435 9 C -0.032 4.032 10 N -0.147 5.147 11 C -0.052 4.052 12 C -0.222 4.222 13 C -0.158 4.158 14 O -0.360 6.360 15 Si 0.663 3.337 16 C -0.119 4.119 17 C -0.107 4.107 18 C -0.172 4.172 19 C -0.126 4.126 20 C -0.152 4.152 21 C -0.012 4.012 22 C -0.166 4.166 23 C 0.019 3.981 24 H 0.124 0.876 25 O -0.294 6.294 26 C -0.072 4.072 27 C -0.169 4.169 28 H 0.151 0.849 29 H 0.083 0.917 30 H 0.069 0.931 31 H 0.268 0.732 32 H 0.180 0.820 33 H 0.162 0.838 34 H 0.213 0.787 35 H 0.120 0.880 36 H 0.233 0.767 37 H -0.228 1.228 38 H -0.182 1.182 39 H 0.136 0.864 40 H 0.154 0.846 41 H 0.162 0.838 42 H 0.149 0.851 43 H 0.138 0.862 44 H 0.139 0.861 45 H 0.063 0.937 46 H 0.076 0.924 47 H 0.115 0.885 48 H 0.087 0.913 49 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 3.402 -3.530 9.673 10.844 hybrid contribution 0.609 -0.240 -0.409 0.772 sum 4.011 -3.770 9.264 10.776 Atomic orbital electron populations 1.23523 0.75170 1.05716 1.02143 1.86494 1.24595 1.32684 1.83253 1.24327 0.92382 0.81428 0.70902 1.90663 1.67262 1.37619 1.46595 1.21208 0.83182 0.91227 0.97497 1.45224 1.53216 1.29010 1.05624 1.21489 0.81631 0.85682 0.82799 1.90833 1.38701 1.42108 1.71875 1.21909 1.03034 1.00971 0.77260 1.43411 1.30268 1.33170 1.07869 1.21999 0.92863 0.98598 0.91692 1.20699 1.02835 1.03280 0.95380 1.24561 0.99867 0.97878 0.93530 1.86562 1.72500 1.39145 1.37792 0.94076 0.77285 0.81121 0.81243 1.19327 0.98966 1.00047 0.93578 1.20446 0.97142 0.95505 0.97591 1.20911 0.97692 1.00113 0.98489 1.21118 1.00205 0.99245 0.92019 1.20236 0.97417 0.97350 1.00232 1.18384 0.97660 0.95454 0.89737 1.23814 0.97919 1.03134 0.91696 1.22918 0.85031 0.95864 0.94317 0.87630 1.87865 1.15256 1.69046 1.57200 1.23009 0.86591 1.00502 0.97050 1.23543 0.97675 0.94545 1.01092 0.84866 0.91689 0.93087 0.73215 0.81958 0.83771 0.78729 0.87960 0.76729 1.22776 1.18234 0.86368 0.84599 0.83753 0.85100 0.86239 0.86058 0.93721 0.92376 0.88530 0.91283 0.87541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.20 16 2 O -0.35 -1.31 10.42 -51.48 -0.54 -1.84 16 3 C 0.47 3.05 6.42 71.23 0.46 3.51 16 4 O -0.53 -7.11 15.66 21.95 0.34 -6.76 16 5 C 0.16 -0.02 1.00 3.38 0.00 -0.02 16 6 N -0.67 2.88 4.53 -423.91 -1.92 0.96 16 7 C 0.50 0.35 7.38 87.66 0.65 1.00 16 8 O -0.56 -6.60 15.14 -3.04 -0.05 -6.64 16 9 C 0.09 -0.52 6.48 85.63 0.56 0.04 16 10 N -0.46 -1.26 2.27 -519.99 -1.18 -2.44 16 11 C 0.07 0.17 9.89 83.00 0.82 0.99 16 12 C -0.21 -1.42 5.57 -18.63 -0.10 -1.53 16 13 C -0.05 -0.25 3.06 71.23 0.22 -0.03 16 14 O -0.55 -4.00 12.88 -148.98 -1.92 -5.91 16 15 Si 0.76 0.42 30.82 68.60 2.11 2.54 16 16 C -0.11 -1.23 6.35 -20.20 -0.13 -1.36 16 17 C -0.09 -0.92 10.05 22.23 0.22 -0.69 16 18 C -0.15 -1.14 9.97 22.03 0.22 -0.92 16 19 C -0.11 -0.62 10.01 22.29 0.22 -0.39 16 20 C -0.13 -0.83 10.00 22.37 0.22 -0.61 16 21 C 0.09 0.76 6.80 39.03 0.27 1.02 16 22 C -0.13 0.91 7.20 31.12 0.22 1.13 16 23 C 0.08 -0.39 4.37 31.12 0.14 -0.26 16 24 H 0.11 -0.84 7.87 -2.39 -0.02 -0.86 16 25 O -0.38 1.83 10.13 -148.98 -1.51 0.32 16 26 C 0.02 -0.21 10.85 113.37 1.23 1.02 16 27 C -0.13 -0.27 6.67 31.12 0.21 -0.06 16 28 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 29 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 30 H 0.05 0.16 8.13 -2.39 -0.02 0.14 16 31 H 0.43 -4.95 8.67 -92.71 -0.80 -5.75 16 32 H 0.16 -2.23 8.12 -2.39 -0.02 -2.25 16 33 H 0.14 -1.45 8.14 -2.39 -0.02 -1.47 16 34 H 0.20 -0.85 6.27 -2.91 -0.02 -0.87 16 35 H 0.10 0.64 7.96 -2.39 -0.02 0.62 16 36 H 0.38 0.19 8.70 -74.06 -0.64 -0.45 16 37 H -0.30 -2.39 7.11 99.48 0.71 -1.68 16 38 H -0.26 -0.05 7.00 99.48 0.70 0.64 16 39 H 0.12 1.12 8.06 -2.91 -0.02 1.09 16 40 H 0.14 0.45 8.06 -2.91 -0.02 0.43 16 41 H 0.14 0.10 8.06 -2.91 -0.02 0.07 16 42 H 0.13 0.28 8.06 -2.91 -0.02 0.25 16 43 H 0.12 -0.94 8.10 -2.39 -0.02 -0.96 16 44 H 0.12 -1.42 8.10 -2.39 -0.02 -1.44 16 45 H 0.04 -0.37 8.14 -2.39 -0.02 -0.38 16 46 H 0.06 -0.64 8.14 -2.39 -0.02 -0.66 16 47 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 48 H 0.07 0.50 7.41 -2.38 -0.02 0.48 16 49 H 0.11 0.46 7.35 -2.39 -0.02 0.44 16 Total: 0.00 -31.83 416.34 1.54 -30.28 By element: Atomic # 1 Polarization: -14.09 SS G_CDS: -0.42 Total: -14.52 kcal Atomic # 6 Polarization: -2.59 SS G_CDS: 6.62 Total: 4.03 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -3.10 Total: -1.48 kcal Atomic # 8 Polarization: -17.18 SS G_CDS: -3.67 Total: -20.84 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: 2.11 Total: 2.54 kcal Total: -31.83 1.54 -30.28 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.756 kcal (2) G-P(sol) polarization free energy of solvation -31.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.282 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds