Wall clock time and date at job start Sun Mar 7 2021 00:18:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 116.99708 * 2 1 4 4 O 1.20825 * 120.00171 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99825 * 179.97438 * 3 2 1 6 6 N 1.46498 * 112.85097 * 35.49655 * 5 3 2 7 7 C 1.34772 * 119.99786 * 65.88225 * 6 5 3 8 8 O 1.21632 * 120.00191 * 4.71705 * 7 6 5 9 9 C 1.47264 * 120.00061 * 184.72385 * 7 6 5 10 10 C 1.36771 * 126.94165 * 179.97438 * 9 7 6 11 11 C 1.50694 * 125.80283 * 359.97438 * 10 9 7 12 12 N 1.34657 * 108.39421 * 179.97438 * 10 9 7 13 13 C 1.36445 * 110.29994 * 0.02562 * 12 10 9 14 14 C 1.50704 * 125.57016 * 179.97438 * 13 12 10 15 15 O 1.42905 * 109.46694 * 245.02348 * 14 13 12 16 16 Si 1.86301 * 109.47249 * 5.02447 * 14 13 12 17 17 C 1.34480 * 108.85747 * 359.74873 * 13 12 10 18 18 C 1.53787 * 113.68932 * 264.23091 * 5 3 2 19 19 C 1.53788 * 87.07882 * 220.00881 * 18 5 3 20 20 H 1.09002 * 113.60787 * 139.98199 * 19 18 5 21 21 O 1.42894 * 113.61166 * 270.88285 * 19 18 5 22 22 C 1.42908 * 113.99928 * 247.50001 * 21 19 18 23 23 C 1.53780 * 87.08244 * 25.43171 * 19 18 5 24 24 H 1.09001 * 109.47010 * 180.02562 * 1 2 3 25 25 H 1.08993 * 109.47371 * 300.00478 * 1 2 3 26 26 H 1.08997 * 109.46988 * 60.00691 * 1 2 3 27 27 H 0.96994 * 120.00179 * 245.60704 * 6 5 3 28 28 H 1.09000 * 109.47707 * 89.99927 * 11 10 9 29 29 H 1.09005 * 109.47254 * 210.00163 * 11 10 9 30 30 H 1.08996 * 109.47372 * 329.99633 * 11 10 9 31 31 H 0.97009 * 124.84861 * 179.97438 * 12 10 9 32 32 H 1.08997 * 109.47088 * 125.02744 * 14 13 12 33 33 H 0.96692 * 114.00206 * 60.00423 * 15 14 13 34 34 H 1.48496 * 109.99786 * 58.68131 * 16 14 13 35 35 H 1.48502 * 109.99516 * 180.02562 * 16 14 13 36 36 H 1.08001 * 126.83785 * 180.25324 * 17 13 12 37 37 H 1.09001 * 113.60982 * 334.55647 * 18 5 3 38 38 H 1.08999 * 113.61466 * 105.45703 * 18 5 3 39 39 H 1.09000 * 109.46929 * 60.00124 * 22 21 19 40 40 H 1.08999 * 109.46814 * 180.02562 * 22 21 19 41 41 H 1.08995 * 109.46946 * 299.99934 * 22 21 19 42 42 H 1.08992 * 113.61190 * 220.01747 * 23 19 18 43 43 H 1.09003 * 113.61186 * 89.11674 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1923 0.2069 -0.7828 7 6 4.0172 0.1597 -2.1183 8 8 3.4119 1.0500 -2.6842 9 6 4.5586 -0.9701 -2.8924 10 6 4.4644 -1.1610 -4.2434 11 6 3.7777 -0.2396 -5.2182 12 7 5.0896 -2.3124 -4.5544 13 6 5.5994 -2.8930 -3.4299 14 6 6.3639 -4.1909 -3.3829 15 8 5.6145 -5.1586 -2.6452 16 14 6.6417 -4.8112 -5.1175 17 6 5.3125 -2.1153 -2.3709 18 6 4.1754 1.4489 1.4019 19 6 5.1714 2.4300 0.7612 20 1 5.3786 3.3056 1.3764 21 8 6.3572 1.8022 0.2697 22 6 7.5413 2.1525 0.9891 23 6 4.1098 2.6765 -0.3237 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5137 -0.8900 27 1 4.7360 -0.4638 -0.3410 28 1 4.4918 0.4966 -5.5872 29 1 3.3891 -0.8201 -6.0550 30 1 2.9552 0.2713 -4.7176 31 1 5.1659 -2.6773 -5.4500 32 1 7.3257 -4.0286 -2.8966 33 1 4.7452 -5.3530 -3.0214 34 1 7.3924 -3.8000 -5.9042 35 1 7.3941 -6.0910 -5.0847 36 1 5.5818 -2.2984 -1.3412 37 1 3.4991 1.9178 2.1167 38 1 4.6424 0.5439 1.7905 39 1 7.4318 1.8600 2.0334 40 1 8.3968 1.6355 0.5544 41 1 7.6984 3.2293 0.9279 42 1 4.5240 2.7625 -1.3282 43 1 3.4157 3.4810 -0.0806 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14247462_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:18:05 Heat of formation + Delta-G solvation = -108.337569 kcal Electronic energy + Delta-G solvation = -29190.339075 eV Core-core repulsion = 25011.976288 eV Total energy + Delta-G solvation = -4178.362787 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.53291 -42.07524 -40.32302 -39.30303 -37.79926 -37.47313 -36.76941 -34.04120 -32.76889 -31.92744 -29.25595 -28.89044 -27.80570 -26.99625 -26.52703 -25.36804 -23.50025 -22.46895 -21.58366 -20.59746 -20.23969 -18.91190 -18.66361 -17.97579 -17.71563 -17.37496 -17.17451 -16.84428 -16.63983 -16.44708 -16.06740 -15.71805 -15.58997 -15.23706 -14.96177 -14.55498 -14.45410 -14.43946 -14.11491 -14.09463 -13.87999 -13.68038 -13.37692 -13.26165 -13.19609 -12.87805 -12.67915 -12.57407 -12.48881 -12.24364 -12.06871 -11.96662 -11.61026 -11.35577 -10.77736 -10.62247 -10.45707 -10.00573 -9.78202 -9.10682 -5.32408 0.81366 1.03199 1.22836 1.26768 1.40511 1.74071 1.83632 1.97615 2.31504 2.60913 2.70765 3.31106 3.31276 3.32637 3.59755 3.64759 3.83095 3.86980 4.10039 4.23268 4.25854 4.29097 4.36207 4.37783 4.38326 4.40853 4.47498 4.54043 4.57878 4.69359 4.71684 4.73113 4.80438 4.81827 4.84386 5.04670 5.10227 5.28039 5.52987 5.54042 5.75305 5.90108 6.17240 6.35468 6.44699 6.70382 6.89257 7.49593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.351 6.351 3 C 0.472 3.528 4 O -0.498 6.498 5 C 0.167 3.833 6 N -0.690 5.690 7 C 0.601 3.399 8 O -0.543 6.543 9 C -0.236 4.236 10 C 0.125 3.875 11 C -0.099 4.099 12 N -0.545 5.545 13 C -0.031 4.031 14 C -0.032 4.032 15 O -0.534 6.534 16 Si 0.670 3.330 17 C -0.123 4.123 18 C -0.146 4.146 19 C 0.067 3.933 20 H 0.089 0.911 21 O -0.361 6.361 22 C 0.029 3.971 23 C -0.122 4.122 24 H 0.101 0.899 25 H 0.063 0.937 26 H 0.063 0.937 27 H 0.409 0.591 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.103 0.897 31 H 0.413 0.587 32 H 0.126 0.874 33 H 0.380 0.620 34 H -0.251 1.251 35 H -0.244 1.244 36 H 0.147 0.853 37 H 0.112 0.888 38 H 0.095 0.905 39 H 0.044 0.956 40 H 0.088 0.912 41 H 0.044 0.956 42 H 0.098 0.902 43 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.325 -3.240 0.144 3.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.267 6.267 3 C 0.313 3.687 4 O -0.384 6.384 5 C 0.078 3.922 6 N -0.343 5.343 7 C 0.392 3.608 8 O -0.421 6.421 9 C -0.245 4.245 10 C 0.006 3.994 11 C -0.157 4.157 12 N -0.144 5.144 13 C -0.139 4.139 14 C -0.144 4.144 15 O -0.339 6.339 16 Si 0.571 3.429 17 C -0.148 4.148 18 C -0.184 4.184 19 C 0.008 3.992 20 H 0.107 0.893 21 O -0.279 6.279 22 C -0.068 4.068 23 C -0.160 4.160 24 H 0.120 0.880 25 H 0.081 0.919 26 H 0.082 0.918 27 H 0.246 0.754 28 H 0.099 0.901 29 H 0.086 0.914 30 H 0.122 0.878 31 H 0.252 0.748 32 H 0.143 0.857 33 H 0.228 0.772 34 H -0.176 1.176 35 H -0.168 1.168 36 H 0.164 0.836 37 H 0.130 0.870 38 H 0.114 0.886 39 H 0.062 0.938 40 H 0.107 0.893 41 H 0.063 0.937 42 H 0.117 0.883 43 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.807 -2.767 -0.759 3.391 hybrid contribution 0.350 -0.104 0.583 0.687 sum 2.157 -2.870 -0.177 3.595 Atomic orbital electron populations 1.23298 0.76304 1.03805 1.02591 1.86541 1.23399 1.33187 1.83556 1.23787 0.91366 0.81639 0.71946 1.90666 1.66286 1.36459 1.44965 1.20980 0.84492 0.91453 0.95309 1.45144 1.52923 1.29465 1.06744 1.17295 0.78145 0.84484 0.80926 1.90775 1.42673 1.38738 1.69919 1.19962 1.12653 0.99300 0.92617 1.20369 0.96524 0.87886 0.94619 1.20649 1.01326 0.97148 0.96540 1.41686 1.44412 1.19046 1.09297 1.20503 1.07445 0.99407 0.86522 1.24410 0.96131 0.85556 1.08315 1.86546 1.33661 1.58839 1.54837 0.95469 0.89271 0.81690 0.76462 1.21788 1.01410 0.93433 0.98138 1.23815 0.98697 1.02283 0.93572 1.22998 0.85492 0.94920 0.95794 0.89295 1.87951 1.14704 1.68932 1.56305 1.22870 0.87367 1.00195 0.96345 1.23571 0.96405 0.94278 1.01747 0.88019 0.91863 0.91807 0.75424 0.90091 0.91422 0.87820 0.74796 0.85707 0.77219 1.17599 1.16767 0.83553 0.87011 0.88619 0.93755 0.89349 0.93708 0.88330 0.86474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.11 16 2 O -0.35 -1.36 10.41 -39.25 -0.41 -1.77 16 3 C 0.47 2.20 6.58 36.01 0.24 2.43 16 4 O -0.50 -3.43 15.66 -18.75 -0.29 -3.73 16 5 C 0.17 0.39 1.00 -132.15 -0.13 0.25 16 6 N -0.69 -1.42 4.53 -49.03 -0.22 -1.64 16 7 C 0.60 2.52 7.36 -12.59 -0.09 2.43 16 8 O -0.54 -3.75 13.36 5.25 0.07 -3.68 16 9 C -0.24 -0.62 6.29 -103.35 -0.65 -1.27 16 10 C 0.12 0.16 7.17 -81.89 -0.59 -0.43 16 11 C -0.10 -0.02 9.88 36.00 0.36 0.33 16 12 N -0.54 0.54 5.41 -5.43 -0.03 0.51 16 13 C -0.03 0.01 6.09 -81.87 -0.50 -0.49 16 14 C -0.03 0.05 2.98 36.01 0.11 0.15 16 15 O -0.53 0.47 12.88 -35.23 -0.45 0.02 16 16 Si 0.67 -1.72 30.96 -169.99 -5.26 -6.99 16 17 C -0.12 -0.12 10.45 -37.50 -0.39 -0.51 16 18 C -0.15 0.10 7.19 -25.91 -0.19 -0.09 16 19 C 0.07 -0.01 4.37 -25.92 -0.11 -0.12 16 20 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 21 O -0.36 -0.31 10.13 -35.23 -0.36 -0.67 16 22 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 23 C -0.12 -0.28 6.63 -25.92 -0.17 -0.45 16 24 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 25 H 0.06 0.06 8.13 -51.93 -0.42 -0.37 16 26 H 0.06 0.13 8.13 -51.93 -0.42 -0.29 16 27 H 0.41 0.07 7.80 -40.82 -0.32 -0.25 16 28 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 30 H 0.10 0.25 6.47 -51.93 -0.34 -0.08 16 31 H 0.41 -1.52 6.72 -40.82 -0.27 -1.80 16 32 H 0.13 -0.15 7.96 -51.93 -0.41 -0.57 16 33 H 0.38 -1.69 8.70 45.56 0.40 -1.30 16 34 H -0.25 0.06 7.11 56.52 0.40 0.47 16 35 H -0.24 -0.20 7.11 56.52 0.40 0.20 16 36 H 0.15 -0.04 7.70 -52.49 -0.40 -0.45 16 37 H 0.11 -0.18 8.10 -51.93 -0.42 -0.60 16 38 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 39 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.10 0.43 7.21 -51.93 -0.37 0.05 16 43 H 0.12 0.26 7.35 -51.93 -0.38 -0.12 16 LS Contribution 364.04 15.07 5.49 5.49 Total: 0.00 -10.12 364.04 -7.37 -17.48 By element: Atomic # 1 Polarization: -3.50 SS G_CDS: -5.93 Total: -9.43 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: 0.04 Total: 4.40 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -0.25 Total: -1.13 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -1.44 Total: -9.82 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.26 Total: -6.99 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -10.12 -7.37 -17.48 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14247462_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.853 kcal (2) G-P(sol) polarization free energy of solvation -10.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds