Wall clock time and date at job start Sun Mar 7 2021 00:41:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.42900 * 109.47151 * 2 1 4 4 C 1.35896 * 117.00252 * 275.31908 * 3 2 1 5 5 C 1.38740 * 120.05089 * 5.08997 * 4 3 2 6 6 C 1.38145 * 119.93750 * 179.70084 * 5 4 3 7 7 C 1.38263 * 120.06044 * 0.59090 * 6 5 4 8 8 C 1.50698 * 119.94519 * 179.70381 * 7 6 5 9 9 O 1.42900 * 109.47030 * 119.97995 * 8 7 6 10 10 Si 1.86295 * 109.47248 * 359.97438 * 8 7 6 11 11 C 1.38263 * 120.10750 * 359.68384 * 7 6 5 12 12 C 1.38140 * 120.05927 * 0.02562 * 11 7 6 13 13 C 1.50706 * 109.46796 * 119.99765 * 2 1 3 14 14 O 1.21283 * 120.00128 * 244.99985 * 13 2 1 15 15 N 1.34771 * 120.00042 * 65.00209 * 13 2 1 16 16 C 1.46497 * 120.00184 * 179.97438 * 15 13 2 17 17 H 1.09002 * 112.84957 * 23.80596 * 16 15 13 18 18 C 1.53779 * 113.61679 * 154.99744 * 16 15 13 19 19 C 1.53781 * 87.08080 * 89.20337 * 18 16 15 20 20 H 1.09002 * 113.61592 * 270.88366 * 19 18 16 21 21 C 1.50698 * 113.61857 * 139.98412 * 19 18 16 22 22 C 1.37920 * 119.92872 * 119.72308 * 21 19 18 23 23 C 1.39655 * 119.84944 * 179.74957 * 22 21 19 24 24 C 1.43198 * 120.15158 * 180.27251 * 23 22 21 25 25 N 9.93449 * 107.73317 * 246.38201 * 13 1 2 26 26 C 1.39609 * 119.69552 * 0.52802 * 23 22 21 27 27 C 1.37971 * 119.84951 * 359.74452 * 26 23 22 28 28 C 1.38341 * 120.14816 * 359.97438 * 27 26 23 29 29 C 1.53781 * 87.08235 * 25.43115 * 19 18 16 30 30 H 1.08998 * 109.47361 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.47523 * 300.00185 * 1 2 3 32 32 H 1.09006 * 109.47237 * 60.00226 * 1 2 3 33 33 H 1.09001 * 109.47523 * 239.99815 * 2 1 3 34 34 H 1.08000 * 120.03110 * 359.97438 * 5 4 3 35 35 H 1.08008 * 119.96834 * 180.26984 * 6 5 4 36 36 H 1.09001 * 109.47102 * 239.97945 * 8 7 6 37 37 H 0.96699 * 113.99898 * 299.99519 * 9 8 7 38 38 H 1.48505 * 110.00220 * 58.68218 * 10 8 7 39 39 H 1.48499 * 110.00064 * 180.02562 * 10 8 7 40 40 H 1.07999 * 119.97103 * 180.02562 * 11 7 6 41 41 H 1.07996 * 120.02925 * 179.97438 * 12 11 7 42 42 H 0.96999 * 120.00024 * 0.02562 * 15 13 2 43 43 H 1.08997 * 113.61418 * 334.65435 * 18 16 15 44 44 H 1.08995 * 113.69169 * 203.75877 * 18 16 15 45 45 H 1.08003 * 120.07561 * 0.02562 * 22 21 19 46 46 H 1.08007 * 120.07866 * 179.72499 * 26 23 22 47 47 H 1.07996 * 119.92705 * 180.02562 * 27 26 23 48 48 H 1.07998 * 119.84610 * 179.97438 * 28 27 26 49 49 H 1.09002 * 113.61342 * 89.11463 * 29 19 18 50 50 H 1.09002 * 113.61779 * 220.01969 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1061 1.9664 -1.2056 5 6 1.6544 1.3303 -2.3528 6 6 1.7514 1.9643 -3.5764 7 6 2.3091 3.2267 -3.6599 8 6 2.4197 3.9132 -4.9969 9 8 1.6858 5.1389 -4.9651 10 14 1.7226 2.8061 -6.3231 11 6 2.7652 3.8604 -2.5188 12 6 2.6651 3.2331 -1.2921 13 6 2.0322 -0.7104 1.2306 14 8 2.6528 -0.0979 2.0735 15 7 1.7918 -2.0263 1.3943 16 6 2.2805 -2.7171 2.5902 17 1 2.4417 -2.0434 3.4319 18 6 1.4682 -3.9716 2.9522 19 6 2.4271 -4.7587 2.0434 20 1 2.1045 -4.8038 1.0032 21 6 2.8137 -6.1061 2.5965 22 6 2.5155 -7.2518 1.8888 23 6 2.8792 -8.4993 2.4004 24 6 2.5780 -9.6925 1.6682 25 7 2.3397 -10.6391 1.0883 26 6 3.5329 -8.5781 3.6315 27 6 3.8200 -7.4244 4.3316 28 6 3.4620 -6.1915 3.8161 29 6 3.4657 -3.6586 2.3190 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5138 -0.8900 33 1 1.8933 -0.5139 -0.8900 34 1 1.2233 0.3421 -2.2888 35 1 1.3959 1.4713 -4.4692 36 1 3.4676 4.1226 -5.2122 37 1 0.7435 5.0284 -4.7782 38 1 0.3033 2.4872 -6.0243 39 1 1.8264 3.4715 -7.6466 40 1 3.2001 4.8466 -2.5866 41 1 3.0218 3.7284 -0.4011 42 1 1.2958 -2.5163 0.7199 43 1 0.4416 -3.9475 2.5869 44 1 1.5369 -4.2495 4.0039 45 1 2.0060 -7.1840 0.9389 46 1 3.8130 -9.5400 4.0351 47 1 4.3260 -7.4839 5.2839 48 1 3.6888 -5.2916 4.3685 49 1 4.0815 -3.8498 3.1979 50 1 4.0516 -3.3817 1.4425 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_10157680.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:41:49 Heat of formation + Delta-G solvation = 12.913616 kcal Electronic energy + Delta-G solvation = -32405.300079 eV Core-core repulsion = 27944.665060 eV Total energy + Delta-G solvation = -4460.635019 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.03010 -41.47783 -40.52661 -39.49964 -38.75272 -37.37032 -37.23641 -34.96055 -33.38404 -32.44031 -32.16201 -31.80042 -31.42973 -26.99685 -26.94006 -26.52950 -25.50552 -24.92217 -24.12640 -23.05689 -22.55099 -21.59252 -20.92218 -19.60487 -19.15013 -18.66990 -18.19631 -17.53289 -17.31289 -16.92900 -16.85666 -16.75694 -16.34028 -16.17077 -16.10973 -15.68606 -15.65463 -15.22798 -15.15250 -15.07444 -14.74800 -14.61942 -14.50779 -14.20029 -14.14162 -14.09843 -13.76803 -13.73916 -13.66610 -13.57808 -13.36504 -13.13048 -13.02149 -12.99627 -12.72786 -12.24151 -12.16460 -12.12136 -12.02988 -11.92176 -11.62083 -11.46852 -10.88982 -10.60681 -10.27754 -10.11379 -10.06353 -9.88458 -9.23658 -4.99756 -0.34663 0.12769 0.25693 0.27130 1.26791 1.37464 1.39299 1.55860 1.66445 1.87147 1.94153 2.37661 2.62761 2.72629 2.79359 3.20927 3.30203 3.36570 3.43046 3.46365 3.50704 3.62440 3.64491 3.67715 3.74417 3.78796 3.83255 3.88103 3.91691 4.05801 4.16894 4.25344 4.27165 4.35989 4.43901 4.46270 4.50341 4.52451 4.54783 4.62874 4.65084 4.71947 4.78519 4.81366 4.83554 4.90536 4.92791 5.13053 5.13835 5.17244 5.22621 5.28485 5.41926 5.47659 5.63859 5.65918 6.16252 6.32240 6.39892 6.46968 7.00543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.208 4.208 6 C -0.075 4.075 7 C -0.156 4.156 8 C -0.070 4.070 9 O -0.530 6.530 10 Si 0.681 3.319 11 C -0.051 4.051 12 C -0.146 4.146 13 C 0.522 3.478 14 O -0.508 6.508 15 N -0.710 5.710 16 C 0.120 3.880 17 H 0.108 0.892 18 C -0.135 4.135 19 C -0.075 4.075 20 H 0.101 0.899 21 C -0.072 4.072 22 C -0.067 4.067 23 C -0.025 4.025 24 C 0.250 3.750 25 N -0.412 5.412 26 C -0.073 4.073 27 C -0.115 4.115 28 C -0.087 4.087 29 C -0.144 4.144 30 H 0.080 0.920 31 H 0.077 0.923 32 H 0.078 0.922 33 H 0.101 0.899 34 H 0.133 0.867 35 H 0.130 0.870 36 H 0.118 0.882 37 H 0.376 0.624 38 H -0.261 1.261 39 H -0.257 1.257 40 H 0.134 0.866 41 H 0.136 0.864 42 H 0.402 0.598 43 H 0.079 0.921 44 H 0.101 0.899 45 H 0.132 0.868 46 H 0.133 0.867 47 H 0.136 0.864 48 H 0.132 0.868 49 H 0.098 0.902 50 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.883 -1.550 0.880 1.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.227 4.227 6 C -0.092 4.092 7 C -0.156 4.156 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.583 3.417 11 C -0.069 4.069 12 C -0.164 4.164 13 C 0.307 3.693 14 O -0.381 6.381 15 N -0.363 5.363 16 C 0.015 3.985 17 H 0.126 0.874 18 C -0.173 4.173 19 C -0.093 4.093 20 H 0.119 0.881 21 C -0.072 4.072 22 C -0.088 4.088 23 C -0.028 4.028 24 C -0.066 4.066 25 N -0.087 5.087 26 C -0.094 4.094 27 C -0.133 4.133 28 C -0.105 4.105 29 C -0.183 4.183 30 H 0.098 0.902 31 H 0.096 0.904 32 H 0.097 0.903 33 H 0.119 0.881 34 H 0.151 0.849 35 H 0.147 0.853 36 H 0.136 0.864 37 H 0.223 0.777 38 H -0.186 1.186 39 H -0.182 1.182 40 H 0.152 0.848 41 H 0.153 0.847 42 H 0.237 0.763 43 H 0.098 0.902 44 H 0.120 0.880 45 H 0.150 0.850 46 H 0.151 0.849 47 H 0.153 0.847 48 H 0.150 0.850 49 H 0.117 0.883 50 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.771 -2.323 0.036 2.448 hybrid contribution -1.024 0.542 0.246 1.184 sum -1.795 -1.781 0.282 2.544 Atomic orbital electron populations 1.22361 0.92257 1.03969 1.04961 1.22185 0.95943 0.83325 0.97916 1.86231 1.80868 1.25374 1.27100 1.19084 0.95121 0.92839 0.83944 1.21200 1.07353 1.01743 0.92392 1.20784 0.97338 0.94155 0.96968 1.20195 1.03386 0.95797 0.96234 1.24951 1.01563 0.91685 0.99778 1.86601 1.24702 1.29110 1.93246 0.95133 0.83369 0.85717 0.77530 1.20862 0.96112 0.99341 0.90551 1.20542 1.03266 0.93592 0.99039 1.20080 0.79788 0.82021 0.87453 1.90785 1.38501 1.65634 1.43178 1.45510 1.58241 1.08753 1.23829 1.21870 0.94913 0.93315 0.88436 0.87376 1.23446 0.98802 0.93881 1.01144 1.21639 0.97654 0.90247 0.99786 0.88103 1.19576 0.98630 0.94183 0.94860 1.21071 0.97834 0.90190 0.99668 1.15988 1.04303 0.87556 0.94991 1.25718 0.93988 0.93138 0.93732 1.81289 1.08280 1.10483 1.08605 1.21249 0.95883 0.99737 0.92521 1.21137 1.00037 0.91719 1.00391 1.21311 0.96093 0.98258 0.94887 1.23595 0.96606 0.94613 1.03444 0.90152 0.90383 0.90270 0.88097 0.84931 0.85285 0.86434 0.77682 1.18573 1.18238 0.84772 0.84656 0.76300 0.90226 0.88013 0.85032 0.84897 0.84660 0.84987 0.88325 0.90429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.59 9.12 37.15 0.34 0.93 16 2 C 0.07 -0.09 2.64 -27.88 -0.07 -0.17 16 3 O -0.28 -0.60 9.34 -39.27 -0.37 -0.97 16 4 C 0.14 0.15 6.60 -39.22 -0.26 -0.10 16 5 C -0.21 0.19 8.24 -39.43 -0.32 -0.14 16 6 C -0.07 0.08 8.66 -39.61 -0.34 -0.27 16 7 C -0.16 0.02 5.39 -104.60 -0.56 -0.54 16 8 C -0.07 0.04 2.82 36.00 0.10 0.14 16 9 O -0.53 -0.55 12.77 -35.23 -0.45 -1.00 16 10 Si 0.68 -0.91 29.78 -169.99 -5.06 -5.97 16 11 C -0.05 -0.03 9.60 -39.61 -0.38 -0.41 16 12 C -0.15 -0.19 9.99 -39.44 -0.39 -0.58 16 13 C 0.52 0.13 7.18 -10.99 -0.08 0.05 16 14 O -0.51 -2.64 16.11 -14.30 -0.23 -2.87 16 15 N -0.71 2.34 5.23 -53.02 -0.28 2.07 16 16 C 0.12 -0.37 4.32 -67.12 -0.29 -0.66 16 17 H 0.11 -0.12 7.46 -51.93 -0.39 -0.51 16 18 C -0.13 0.65 7.29 -25.92 -0.19 0.46 16 19 C -0.07 0.36 3.85 -90.96 -0.35 0.00 16 20 H 0.10 -0.58 8.09 -51.93 -0.42 -1.00 16 21 C -0.07 0.25 5.28 -104.68 -0.55 -0.30 16 22 C -0.07 0.17 9.41 -39.17 -0.37 -0.20 16 23 C -0.03 0.03 5.73 -106.93 -0.61 -0.58 16 24 C 0.25 0.36 15.33 -22.49 -0.34 0.02 16 25 N -0.41 -1.81 18.53 41.81 0.77 -1.04 16 26 C -0.07 0.17 9.76 -39.17 -0.38 -0.21 16 27 C -0.11 0.40 10.03 -39.64 -0.40 0.00 16 28 C -0.09 0.32 8.60 -39.49 -0.34 -0.02 16 29 C -0.14 0.54 7.25 -25.92 -0.19 0.35 16 30 H 0.08 -0.47 7.93 -51.93 -0.41 -0.88 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.08 -0.27 6.91 -51.93 -0.36 -0.63 16 33 H 0.10 -0.39 6.31 -51.93 -0.33 -0.72 16 34 H 0.13 -0.46 5.43 -52.49 -0.29 -0.75 16 35 H 0.13 -0.38 4.87 -52.48 -0.26 -0.64 16 36 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 37 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 38 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 39 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 40 H 0.13 -0.02 8.06 -52.49 -0.42 -0.45 16 41 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 42 H 0.40 -2.53 8.49 -40.82 -0.35 -2.88 16 43 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 44 H 0.10 -0.51 7.72 -51.93 -0.40 -0.91 16 45 H 0.13 -0.50 8.05 -52.48 -0.42 -0.92 16 46 H 0.13 -0.45 8.06 -52.48 -0.42 -0.88 16 47 H 0.14 -0.69 8.06 -52.49 -0.42 -1.12 16 48 H 0.13 -0.69 6.64 -52.49 -0.35 -1.04 16 49 H 0.10 -0.41 6.30 -51.93 -0.33 -0.74 16 50 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 LS Contribution 420.60 15.07 6.34 6.34 Total: 0.00 -10.97 420.60 -11.73 -22.71 By element: Atomic # 1 Polarization: -10.59 SS G_CDS: -6.47 Total: -17.06 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: -5.99 Total: -2.21 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: 0.50 Total: 1.03 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -1.05 Total: -4.84 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.06 Total: -5.97 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -10.97 -11.73 -22.71 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_10157680.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.622 kcal (2) G-P(sol) polarization free energy of solvation -10.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.733 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.708 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds