Wall clock time and date at job start Sun Mar 7 2021 00:41:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39613 * 120.15273 * 309.49476 * 3 2 1 5 5 C 1.37959 * 119.84723 * 179.97438 * 4 3 2 6 6 C 1.38346 * 120.15105 * 359.74417 * 5 4 3 7 7 C 1.38386 * 120.30365 * 0.51354 * 6 5 4 8 8 C 1.50693 * 119.92217 * 179.75978 * 7 6 5 9 9 H 1.08997 * 112.90894 * 190.97706 * 8 7 6 10 10 C 1.53781 * 113.61855 * 322.23002 * 8 7 6 11 11 C 1.53785 * 87.08279 * 139.98028 * 10 8 7 12 12 H 1.08999 * 113.68962 * 220.01161 * 11 10 8 13 13 N 1.46497 * 113.61392 * 89.11547 * 11 10 8 14 14 C 1.34781 * 119.99947 * 107.50214 * 13 11 10 15 15 O 1.21696 * 119.99692 * 0.02562 * 14 13 11 16 16 C 1.46678 * 119.99818 * 179.97438 * 14 13 11 17 17 C 1.37871 * 126.22782 * 180.02562 * 16 14 13 18 18 C 1.39834 * 107.08165 * 180.02562 * 17 16 14 19 19 C 1.50704 * 126.06892 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.46742 * 65.05299 * 19 18 17 21 21 Si 1.86297 * 109.47571 * 185.05504 * 19 18 17 22 22 C 1.35452 * 107.86685 * 0.02562 * 18 17 16 23 23 N 1.35535 * 108.86987 * 359.97438 * 22 18 17 24 24 C 1.53785 * 87.08045 * 334.56755 * 11 10 8 25 25 C 1.37921 * 120.14977 * 359.48938 * 7 6 5 26 26 H 1.08004 * 120.07632 * 359.96246 * 4 3 2 27 27 H 1.08000 * 119.92818 * 180.02562 * 5 4 3 28 28 H 1.08005 * 119.84531 * 180.27514 * 6 5 4 29 29 H 1.09002 * 113.61177 * 25.43255 * 10 8 7 30 30 H 1.09004 * 113.61283 * 254.52607 * 10 8 7 31 31 H 0.96998 * 120.00389 * 287.50552 * 13 11 10 32 32 H 1.08003 * 126.46200 * 359.97438 * 17 16 14 33 33 H 1.09004 * 109.47014 * 305.05788 * 19 18 17 34 34 H 0.96700 * 113.99894 * 60.00245 * 20 19 18 35 35 H 1.48496 * 110.00254 * 180.02562 * 21 19 18 36 36 H 1.48505 * 110.00003 * 301.32329 * 21 19 18 37 37 H 1.08006 * 125.56278 * 180.26333 * 22 18 17 38 38 H 0.97003 * 125.67591 * 180.02562 * 23 22 18 39 39 H 1.08998 * 113.61322 * 139.98021 * 24 11 10 40 40 H 1.09005 * 113.61456 * 270.88457 * 24 11 10 41 41 H 1.08001 * 120.07524 * 180.27836 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.7668 0.9316 5 6 4.6492 -0.7620 0.9256 6 6 5.3373 -0.0030 -0.0042 7 6 4.6482 0.7642 -0.9270 8 6 5.4065 1.5918 -1.9324 9 1 4.7691 2.2911 -2.4735 10 6 6.6826 2.2348 -1.3640 11 6 7.3564 1.8949 -2.7040 12 1 8.3821 1.5409 -2.6011 13 7 7.2160 2.9460 -3.7148 14 6 8.2788 3.7034 -4.0515 15 8 9.3551 3.5138 -3.5162 16 6 8.1383 4.7555 -5.0639 17 6 9.1345 5.6007 -5.5043 18 6 8.5649 6.4410 -6.4659 19 6 9.2766 7.5309 -7.2254 20 8 10.2774 6.9511 -8.0646 21 14 8.0491 8.4606 -8.2740 22 6 7.2595 6.1023 -6.5929 23 7 6.9878 5.0792 -5.7465 24 6 6.3253 0.7627 -2.8453 25 6 3.2690 0.7686 -0.9322 26 1 2.7336 -1.3629 1.6554 27 1 5.1933 -1.3555 1.6454 28 1 6.4174 -0.0063 -0.0072 29 1 7.1024 1.6954 -0.5150 30 1 6.5883 3.3054 -1.1820 31 1 6.3582 3.0970 -4.1416 32 1 10.1611 5.6123 -5.1691 33 1 9.7463 8.2174 -6.5209 34 1 9.9303 6.3280 -8.7177 35 1 8.7387 9.5378 -9.0285 36 1 7.3787 7.5297 -9.2170 37 1 6.5520 6.5682 -7.2630 38 1 6.1259 4.6471 -5.6397 39 1 5.9425 0.6448 -3.8590 40 1 6.6474 -0.1792 -2.4012 41 1 2.7325 1.3643 -1.6559 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_10543058.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:41:53 Heat of formation + Delta-G solvation = 64.964105 kcal Electronic energy + Delta-G solvation = -25166.833984 eV Core-core repulsion = 21401.013703 eV Total energy + Delta-G solvation = -3765.820281 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.126 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.57381 -41.65515 -40.30969 -38.98754 -37.76720 -37.35605 -34.80346 -32.72276 -32.45077 -32.08440 -30.66021 -26.99510 -26.95858 -26.20629 -25.11598 -24.12177 -23.00916 -21.32747 -21.03126 -20.82364 -20.01366 -19.16364 -17.64914 -17.53442 -17.31875 -16.98975 -16.67195 -16.48218 -16.11442 -15.84329 -15.67802 -15.31168 -15.14590 -14.97744 -14.74446 -14.59387 -14.39707 -14.20689 -14.05292 -13.84543 -13.77097 -13.69326 -13.48255 -13.12378 -13.01230 -12.74200 -12.42660 -12.05054 -11.93339 -11.82481 -11.47594 -11.21397 -10.50227 -10.29794 -10.12560 -10.01802 -9.89641 -9.36841 -4.97354 -0.35857 0.11542 0.35193 1.30062 1.49131 1.57137 1.64852 1.83309 1.85814 1.94376 1.99995 2.30338 2.71410 2.77976 3.20364 3.43067 3.47312 3.49715 3.61941 3.68578 3.73439 3.84785 3.86804 3.90551 3.98732 4.04512 4.25799 4.29862 4.43527 4.49569 4.53872 4.61944 4.70635 4.71711 4.77435 4.81229 4.85741 4.91406 5.01388 5.11824 5.16229 5.27777 5.41097 5.54814 5.62709 5.74830 6.13908 6.33432 6.45680 6.52483 7.05497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.099 0.901 10 C -0.144 4.144 11 C 0.120 3.880 12 H 0.110 0.890 13 N -0.716 5.716 14 C 0.594 3.406 15 O -0.520 6.520 16 C -0.060 4.060 17 C -0.073 4.073 18 C -0.208 4.208 19 C -0.040 4.040 20 O -0.530 6.530 21 Si 0.683 3.317 22 C 0.036 3.964 23 N -0.535 5.535 24 C -0.136 4.136 25 C -0.068 4.068 26 H 0.133 0.867 27 H 0.136 0.864 28 H 0.133 0.867 29 H 0.099 0.901 30 H 0.077 0.923 31 H 0.394 0.606 32 H 0.151 0.849 33 H 0.116 0.884 34 H 0.374 0.626 35 H -0.258 1.258 36 H -0.261 1.261 37 H 0.176 0.824 38 H 0.418 0.582 39 H 0.077 0.923 40 H 0.102 0.898 41 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.662 -0.237 -0.309 1.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.073 4.073 8 C -0.093 4.093 9 H 0.117 0.883 10 C -0.182 4.182 11 C 0.015 3.985 12 H 0.128 0.872 13 N -0.367 5.367 14 C 0.382 3.618 15 O -0.395 6.395 16 C -0.172 4.172 17 C -0.100 4.100 18 C -0.215 4.215 19 C -0.151 4.151 20 O -0.336 6.336 21 Si 0.584 3.416 22 C -0.101 4.101 23 N -0.132 5.132 24 C -0.174 4.174 25 C -0.088 4.088 26 H 0.151 0.849 27 H 0.154 0.846 28 H 0.150 0.850 29 H 0.117 0.883 30 H 0.096 0.904 31 H 0.228 0.772 32 H 0.169 0.831 33 H 0.134 0.866 34 H 0.221 0.779 35 H -0.183 1.183 36 H -0.186 1.186 37 H 0.193 0.807 38 H 0.255 0.745 39 H 0.096 0.904 40 H 0.120 0.880 41 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.604 0.122 -0.307 2.625 hybrid contribution -0.101 -1.084 -0.683 1.285 sum -2.705 -0.963 -0.990 3.037 Atomic orbital electron populations 1.81312 1.12063 1.07780 1.07494 1.25742 0.92699 0.94065 0.94087 1.15986 0.84303 1.02465 1.00070 1.21249 0.94533 0.96790 0.96801 1.21140 0.93579 0.99400 0.99139 1.21315 1.00694 0.94729 0.93783 1.19572 0.92717 0.97954 0.97013 1.21627 0.95134 0.96994 0.95561 0.88311 1.23594 0.94859 1.02184 0.97573 1.21870 1.01014 0.87689 0.87941 0.87217 1.45538 1.12398 1.36168 1.42611 1.17033 0.84026 0.80023 0.80748 1.90887 1.26428 1.68714 1.53509 1.20376 0.87913 1.04793 1.04083 1.21242 0.98693 0.93935 0.96104 1.19846 0.93871 1.03553 1.04253 1.24334 0.97078 0.96818 0.96879 1.86615 1.34301 1.62644 1.50058 0.95392 0.82291 0.80969 0.82918 1.21908 0.97542 0.92846 0.97755 1.41918 1.10786 1.28450 1.32010 1.23459 0.95495 0.97888 1.00511 1.21062 0.93639 0.97152 0.96951 0.84873 0.84625 0.84957 0.88292 0.90423 0.77185 0.83140 0.86650 0.77868 1.18299 1.18568 0.80738 0.74479 0.90393 0.87965 0.85093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.82 18.54 41.84 0.78 -1.05 16 2 C 0.25 0.38 15.33 -22.47 -0.34 0.03 16 3 C -0.02 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.17 9.76 -39.17 -0.38 -0.21 16 5 C -0.11 0.39 10.03 -39.64 -0.40 -0.01 16 6 C -0.09 0.31 8.59 -39.49 -0.34 -0.03 16 7 C -0.07 0.24 5.28 -104.69 -0.55 -0.31 16 8 C -0.07 0.34 3.85 -90.96 -0.35 -0.02 16 9 H 0.10 -0.54 8.09 -51.93 -0.42 -0.96 16 10 C -0.14 0.50 7.25 -25.92 -0.19 0.31 16 11 C 0.12 -0.32 4.32 -67.11 -0.29 -0.61 16 12 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 13 N -0.72 1.84 5.26 -54.32 -0.29 1.56 16 14 C 0.59 0.67 7.79 -12.85 -0.10 0.57 16 15 O -0.52 -2.77 16.48 5.19 0.09 -2.69 16 16 C -0.06 -0.01 7.06 -81.98 -0.58 -0.58 16 17 C -0.07 -0.11 10.59 -39.12 -0.41 -0.52 16 18 C -0.21 0.09 5.43 -105.02 -0.57 -0.48 16 19 C -0.04 0.02 3.02 36.01 0.11 0.13 16 20 O -0.53 -0.79 12.88 -35.23 -0.45 -1.24 16 21 Si 0.68 -1.35 30.60 -169.99 -5.20 -6.55 16 22 C 0.04 -0.10 10.45 -16.91 -0.18 -0.28 16 23 N -0.54 1.77 5.99 -9.39 -0.06 1.72 16 24 C -0.14 0.61 7.29 -25.91 -0.19 0.42 16 25 C -0.07 0.17 9.41 -39.17 -0.37 -0.20 16 26 H 0.13 -0.45 8.06 -52.48 -0.42 -0.87 16 27 H 0.14 -0.69 8.06 -52.49 -0.42 -1.11 16 28 H 0.13 -0.68 6.66 -52.48 -0.35 -1.03 16 29 H 0.10 -0.39 6.31 -51.93 -0.33 -0.72 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 31 H 0.39 -2.17 7.83 -40.82 -0.32 -2.49 16 32 H 0.15 0.38 8.06 -52.48 -0.42 -0.04 16 33 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 34 H 0.37 -0.55 8.70 45.56 0.40 -0.15 16 35 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 36 H -0.26 0.13 7.11 56.52 0.40 0.53 16 37 H 0.18 -0.95 6.21 -52.48 -0.33 -1.28 16 38 H 0.42 -2.81 8.19 -40.82 -0.33 -3.14 16 39 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.10 -0.48 7.71 -51.93 -0.40 -0.88 16 41 H 0.13 -0.48 8.05 -52.49 -0.42 -0.90 16 LS Contribution 358.79 15.07 5.41 5.41 Total: 0.00 -10.66 358.79 -10.09 -20.75 By element: Atomic # 1 Polarization: -10.89 SS G_CDS: -4.62 Total: -15.51 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -5.75 Total: -2.39 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: 0.43 Total: 2.22 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -0.37 Total: -3.93 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.20 Total: -6.55 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -10.66 -10.09 -20.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_10543058.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.716 kcal (2) G-P(sol) polarization free energy of solvation -10.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.752 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds