Wall clock time and date at job start Sun Mar 7 2021 00:42:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.39612 * 120.14733 * 226.89052 * 3 2 1 5 5 C 1.37970 * 119.84010 * 180.02562 * 4 3 2 6 6 C 1.38333 * 120.15348 * 359.97438 * 5 4 3 7 7 C 1.38385 * 120.30847 * 0.02562 * 6 5 4 8 8 C 1.50700 * 119.92733 * 179.97438 * 7 6 5 9 9 H 1.09000 * 112.90891 * 191.25005 * 8 7 6 10 10 C 1.53786 * 113.61233 * 322.50023 * 8 7 6 11 11 C 1.53774 * 87.08098 * 139.98368 * 10 8 7 12 12 H 1.09006 * 113.68954 * 220.00702 * 11 10 8 13 13 N 1.46505 * 113.61597 * 89.11511 * 11 10 8 14 14 C 1.34777 * 119.99724 * 107.50390 * 13 11 10 15 15 O 1.21723 * 120.00181 * 359.97438 * 14 13 11 16 16 C 1.46566 * 119.99859 * 179.72469 * 14 13 11 17 17 C 1.40853 * 126.58092 * 180.27190 * 16 14 13 18 18 C 1.40090 * 132.86518 * 0.04185 * 17 16 14 19 19 C 1.36448 * 119.25254 * 179.97438 * 18 17 16 20 20 C 1.50698 * 120.29843 * 179.97438 * 19 18 17 21 21 O 1.42897 * 109.47550 * 240.02495 * 20 19 18 22 22 Si 1.86305 * 109.47372 * 120.01713 * 20 19 18 23 23 C 1.40169 * 119.41024 * 359.97147 * 19 18 17 24 24 C 1.35181 * 120.31461 * 0.02562 * 23 19 18 25 25 N 1.36242 * 120.71081 * 0.02562 * 24 23 19 26 26 N 1.40013 * 132.01219 * 180.02562 * 25 24 23 27 27 C 1.30742 * 109.60540 * 179.68482 * 26 25 24 28 28 C 1.53776 * 87.08146 * 334.56554 * 11 10 8 29 29 C 1.37925 * 120.14983 * 0.24689 * 7 6 5 30 30 H 1.07995 * 120.08029 * 0.02562 * 4 3 2 31 31 H 1.08005 * 119.91893 * 180.02562 * 5 4 3 32 32 H 1.08006 * 119.84835 * 180.02562 * 6 5 4 33 33 H 1.09001 * 113.61468 * 25.43382 * 10 8 7 34 34 H 1.09001 * 113.60973 * 254.53328 * 10 8 7 35 35 H 0.97000 * 119.99792 * 287.49957 * 13 11 10 36 36 H 1.07996 * 120.37448 * 359.93359 * 18 17 16 37 37 H 1.09005 * 109.47011 * 0.02562 * 20 19 18 38 38 H 0.96710 * 113.99506 * 299.99690 * 21 20 19 39 39 H 1.48508 * 109.99450 * 58.68549 * 22 20 19 40 40 H 1.48496 * 110.00007 * 180.02562 * 22 20 19 41 41 H 1.08000 * 119.83778 * 179.97438 * 23 19 18 42 42 H 1.08009 * 119.64531 * 180.02562 * 24 23 19 43 43 H 1.08003 * 125.63256 * 180.29699 * 27 26 25 44 44 H 1.09002 * 113.61634 * 139.98104 * 28 11 10 45 45 H 1.09003 * 113.61635 * 270.88631 * 28 11 10 46 46 H 1.07999 * 120.08096 * 179.74744 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2688 0.8260 0.8814 5 6 4.6485 0.8220 0.8756 6 6 5.3373 0.0023 -0.0003 7 6 4.6490 -0.8183 -0.8766 8 6 5.4081 -1.7074 -1.8276 9 1 4.7709 -2.1540 -2.5910 10 6 6.6835 -1.0592 -2.3917 11 6 7.3585 -2.4311 -2.2283 12 1 8.3844 -2.3739 -1.8641 13 7 7.2189 -3.2974 -3.4016 14 6 8.2819 -3.5321 -4.1962 15 8 9.3578 -3.0240 -3.9395 16 6 8.1437 -4.4036 -5.3665 17 6 9.1575 -4.7461 -6.2824 18 6 10.5126 -4.4035 -6.3763 19 6 11.2579 -4.9060 -7.4028 20 6 12.7175 -4.5524 -7.5267 21 8 12.9443 -3.8958 -8.7754 22 14 13.7420 -6.1065 -7.4470 23 6 10.6538 -5.7542 -8.3411 24 6 9.3443 -6.0713 -8.2306 25 7 8.5916 -5.5738 -7.2098 26 7 7.2433 -5.7414 -6.8716 27 6 6.9750 -5.0611 -5.7879 28 6 6.3280 -2.7190 -1.1239 29 6 3.2698 -0.8202 -0.8855 30 1 2.7323 1.4661 1.5660 31 1 5.1919 1.4596 1.5572 32 1 6.4174 0.0027 -0.0004 33 1 7.1026 -0.2868 -1.7469 34 1 6.5886 -0.7401 -3.4296 35 1 6.3614 -3.7021 -3.6063 36 1 10.9621 -3.7484 -5.6447 37 1 13.0010 -3.8882 -6.7102 38 1 12.7135 -4.4297 -9.5481 39 1 13.3430 -7.0341 -8.5360 40 1 15.1836 -5.7712 -7.5675 41 1 11.2371 -6.1556 -9.1566 42 1 8.8899 -6.7262 -8.9595 43 1 6.0138 -5.0116 -5.2979 44 1 5.9461 -3.7398 -1.1382 45 1 6.6499 -2.4003 -0.1325 46 1 2.7337 -1.4580 -1.5727 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_11618758.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:42:01 Heat of formation + Delta-G solvation = 127.017953 kcal Electronic energy + Delta-G solvation = -31513.214806 eV Core-core repulsion = 27144.443431 eV Total energy + Delta-G solvation = -4368.771376 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.137 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -43.29910 -41.44908 -40.26139 -39.40007 -38.80336 -37.42874 -37.30048 -34.53369 -34.13656 -32.20812 -32.11165 -31.95358 -30.19725 -27.38665 -26.57451 -26.17492 -25.08813 -24.72130 -23.77010 -23.06661 -22.68785 -21.34944 -20.62446 -19.17487 -18.87765 -18.58384 -17.88206 -17.51536 -17.22634 -16.99594 -16.89523 -16.55057 -16.37143 -15.96432 -15.80345 -15.53505 -15.42955 -15.25359 -15.13446 -14.79972 -14.67067 -14.35023 -14.20839 -14.14208 -13.94179 -13.80564 -13.73843 -13.47879 -13.33951 -13.21984 -12.91037 -12.73511 -12.45882 -12.44485 -12.11034 -11.88850 -11.69488 -11.61566 -11.55558 -11.13192 -10.92446 -10.87119 -10.31296 -9.99838 -9.87744 -9.62178 -8.77712 -4.88086 -0.54656 -0.16305 -0.12294 0.40940 1.03872 1.05586 1.22744 1.57934 1.61192 1.90511 1.93078 2.09949 2.26403 2.52229 2.84928 2.88806 3.10525 3.25210 3.38312 3.55535 3.58407 3.72595 3.77628 3.84459 3.88419 3.97409 4.00560 4.08854 4.20881 4.22893 4.25122 4.36625 4.37157 4.42337 4.55874 4.59514 4.74601 4.82065 4.83103 4.90819 5.00852 5.06407 5.10750 5.12721 5.16242 5.18206 5.28059 5.31805 5.38338 5.46379 5.60832 5.66633 5.77709 5.93098 6.30615 6.41354 6.46866 6.66534 7.36128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.475 5.475 2 C 0.277 3.723 3 C -0.047 4.047 4 C -0.077 4.077 5 C -0.117 4.117 6 C -0.083 4.083 7 C -0.073 4.073 8 C -0.067 4.067 9 H 0.112 0.888 10 C -0.143 4.143 11 C 0.116 3.884 12 H 0.088 0.912 13 N -0.698 5.698 14 C 0.602 3.398 15 O -0.588 6.588 16 C -0.339 4.339 17 C 0.152 3.848 18 C -0.114 4.114 19 C -0.052 4.052 20 C -0.084 4.084 21 O -0.542 6.542 22 Si 0.768 3.232 23 C -0.157 4.157 24 C 0.116 3.884 25 N -0.275 5.275 26 N -0.341 5.341 27 C 0.131 3.869 28 C -0.124 4.124 29 C -0.068 4.068 30 H 0.139 0.861 31 H 0.155 0.845 32 H 0.150 0.850 33 H 0.103 0.897 34 H 0.063 0.937 35 H 0.413 0.587 36 H 0.153 0.847 37 H 0.124 0.876 38 H 0.390 0.610 39 H -0.255 1.255 40 H -0.294 1.294 41 H 0.189 0.811 42 H 0.204 0.796 43 H 0.234 0.766 44 H 0.087 0.913 45 H 0.107 0.893 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.483 -3.948 -0.008 5.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.037 4.037 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.135 4.135 6 C -0.102 4.102 7 C -0.073 4.073 8 C -0.085 4.085 9 H 0.130 0.870 10 C -0.181 4.181 11 C 0.011 3.989 12 H 0.106 0.894 13 N -0.349 5.349 14 C 0.392 3.608 15 O -0.470 6.470 16 C -0.353 4.353 17 C 0.031 3.969 18 C -0.134 4.134 19 C -0.058 4.058 20 C -0.191 4.191 21 O -0.351 6.351 22 Si 0.668 3.332 23 C -0.178 4.178 24 C -0.009 4.009 25 N -0.038 5.038 26 N -0.162 5.162 27 C -0.050 4.050 28 C -0.162 4.162 29 C -0.088 4.088 30 H 0.157 0.843 31 H 0.172 0.828 32 H 0.167 0.833 33 H 0.122 0.878 34 H 0.082 0.918 35 H 0.250 0.750 36 H 0.171 0.829 37 H 0.142 0.858 38 H 0.240 0.760 39 H -0.180 1.180 40 H -0.221 1.221 41 H 0.206 0.794 42 H 0.221 0.779 43 H 0.250 0.750 44 H 0.105 0.895 45 H 0.126 0.874 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.567 -4.433 -0.723 5.736 hybrid contribution -0.334 0.984 -0.559 1.180 sum 3.233 -3.449 -1.282 4.898 Atomic orbital electron populations 1.81314 1.13813 1.10052 1.09898 1.26178 0.93105 0.92227 0.92236 1.16108 0.82842 1.03537 1.02534 1.21403 0.95193 0.96536 0.96607 1.21379 0.93100 0.99509 0.99500 1.21601 1.01673 0.93587 0.93295 1.19702 0.92345 0.97780 0.97511 1.21616 0.94716 0.95557 0.96613 0.87028 1.23593 0.95501 0.97043 1.02013 1.21856 1.00304 0.90737 0.86047 0.89409 1.45245 1.12546 1.50264 1.26836 1.16958 0.83648 0.78963 0.81257 1.90758 1.28428 1.53834 1.73971 1.19713 0.94270 1.16781 1.04582 1.19570 0.94338 0.92493 0.90548 1.20664 0.89805 1.01985 1.00903 1.20561 0.97284 0.94260 0.93676 1.25288 0.94346 1.09895 0.89602 1.86682 1.88102 1.44812 1.15458 0.93454 0.75410 0.74920 0.89388 1.21086 0.93557 1.00870 1.02290 1.22159 0.90910 0.98007 0.89854 1.46299 1.08633 1.30473 1.18439 1.77574 0.89365 1.29036 1.20192 1.24613 0.99571 0.89799 0.91032 1.23404 0.94387 1.00242 0.98128 1.21213 0.94140 0.96750 0.96731 0.84307 0.82763 0.83265 0.87829 0.91784 0.75046 0.82931 0.85782 0.75979 1.17966 1.22070 0.79394 0.77944 0.74965 0.89472 0.87450 0.84192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.45 18.54 19.01 0.35 -5.10 16 2 C 0.28 1.39 15.33 88.33 1.35 2.75 16 3 C -0.05 0.06 5.73 -21.36 -0.12 -0.06 16 4 C -0.08 0.32 9.76 22.54 0.22 0.54 16 5 C -0.12 0.85 10.03 22.23 0.22 1.07 16 6 C -0.08 0.65 8.60 22.33 0.19 0.84 16 7 C -0.07 0.49 5.28 -19.90 -0.11 0.39 16 8 C -0.07 0.59 3.85 -11.01 -0.04 0.54 16 9 H 0.11 -1.20 8.09 -2.39 -0.02 -1.22 16 10 C -0.14 0.85 7.25 31.12 0.23 1.07 16 11 C 0.12 -0.48 4.32 45.51 0.20 -0.29 16 12 H 0.09 0.02 7.46 -2.38 -0.02 0.01 16 13 N -0.70 2.17 5.25 -444.08 -2.33 -0.16 16 14 C 0.60 2.92 7.78 86.41 0.67 3.59 16 15 O -0.59 -7.19 15.30 -4.42 -0.07 -7.25 16 16 C -0.34 -1.34 6.17 -19.90 -0.12 -1.47 16 17 C 0.15 0.78 6.76 39.49 0.27 1.05 16 18 C -0.11 -0.35 9.35 22.30 0.21 -0.14 16 19 C -0.05 0.11 4.53 -19.81 -0.09 0.02 16 20 C -0.08 0.28 2.84 71.24 0.20 0.48 16 21 O -0.54 0.49 12.88 -148.98 -1.92 -1.43 16 22 Si 0.77 -4.27 31.97 68.60 2.19 -2.08 16 23 C -0.16 0.97 8.38 22.03 0.18 1.15 16 24 C 0.12 -0.43 11.17 83.30 0.93 0.50 16 25 N -0.27 -0.82 3.86 -187.28 -0.72 -1.54 16 26 N -0.34 -1.31 12.57 -56.61 -0.71 -2.02 16 27 C 0.13 -0.05 11.44 85.42 0.98 0.92 16 28 C -0.12 1.11 7.29 31.12 0.23 1.34 16 29 C -0.07 0.30 9.41 22.54 0.21 0.51 16 30 H 0.14 -0.84 8.06 -2.91 -0.02 -0.87 16 31 H 0.15 -1.74 8.06 -2.91 -0.02 -1.77 16 32 H 0.15 -1.69 6.64 -2.91 -0.02 -1.71 16 33 H 0.10 -0.77 6.30 -2.39 -0.02 -0.79 16 34 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.41 -3.83 7.62 -92.71 -0.71 -4.54 16 36 H 0.15 0.75 7.01 -2.91 -0.02 0.73 16 37 H 0.12 -0.38 7.71 -2.38 -0.02 -0.40 16 38 H 0.39 -3.47 8.09 -74.05 -0.60 -4.07 16 39 H -0.26 1.27 7.05 99.48 0.70 1.97 16 40 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 41 H 0.19 -2.46 7.26 -2.91 -0.02 -2.48 16 42 H 0.20 -2.01 8.06 -2.91 -0.02 -2.03 16 43 H 0.23 -2.38 7.46 -2.91 -0.02 -2.40 16 44 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 45 H 0.11 -1.08 7.72 -2.39 -0.02 -1.10 16 46 H 0.14 -0.93 8.05 -2.91 -0.02 -0.95 16 Total: 0.00 -29.87 399.69 2.40 -27.46 By element: Atomic # 1 Polarization: -22.50 SS G_CDS: -0.20 Total: -22.70 kcal Atomic # 6 Polarization: 9.00 SS G_CDS: 5.81 Total: 14.81 kcal Atomic # 7 Polarization: -5.40 SS G_CDS: -3.41 Total: -8.82 kcal Atomic # 8 Polarization: -6.69 SS G_CDS: -1.99 Total: -8.68 kcal Atomic # 14 Polarization: -4.27 SS G_CDS: 2.19 Total: -2.08 kcal Total: -29.87 2.40 -27.46 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_11618758.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 154.483 kcal (2) G-P(sol) polarization free energy of solvation -29.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.465 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds