Wall clock time and date at job start Sun Mar 7 2021 00:43:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39619 * 120.15062 * 300.94823 * 3 2 1 5 5 C 1.37966 * 119.84754 * 179.97438 * 4 3 2 6 6 C 1.38343 * 120.14708 * 359.74676 * 5 4 3 7 7 C 1.38379 * 120.30915 * 0.51179 * 6 5 4 8 8 C 1.50693 * 119.92645 * 179.76283 * 7 6 5 9 9 H 1.09001 * 112.85448 * 168.52735 * 8 7 6 10 10 C 1.53784 * 113.61638 * 299.72471 * 8 7 6 11 11 C 1.53783 * 87.08322 * 140.06477 * 10 8 7 12 12 H 1.09000 * 113.61564 * 219.93731 * 11 10 8 13 13 N 1.46494 * 113.61459 * 89.11657 * 11 10 8 14 14 C 1.34779 * 120.00086 * 156.53052 * 13 11 10 15 15 O 1.21569 * 119.99598 * 359.97438 * 14 13 11 16 16 C 1.47721 * 119.99987 * 180.02562 * 14 13 11 17 17 C 1.39637 * 120.11640 * 180.27070 * 16 14 13 18 18 C 1.37855 * 119.87683 * 180.27278 * 17 16 14 19 19 C 1.50706 * 119.94140 * 179.72946 * 18 17 16 20 20 O 1.42901 * 109.47017 * 254.72904 * 19 18 17 21 21 Si 1.86298 * 109.47156 * 134.72616 * 19 18 17 22 22 C 1.38636 * 120.12049 * 359.45386 * 18 17 16 23 23 F 1.35098 * 119.87968 * 180.29356 * 22 18 17 24 24 C 1.38677 * 120.23766 * 0.27710 * 22 18 17 25 25 C 1.37818 * 120.11890 * 359.97438 * 24 22 18 26 26 C 1.53789 * 87.17073 * 334.52927 * 11 10 8 27 27 C 1.37928 * 120.15097 * 359.49067 * 7 6 5 28 28 H 1.08007 * 120.07342 * 0.02562 * 4 3 2 29 29 H 1.07993 * 119.92525 * 180.02562 * 5 4 3 30 30 H 1.08004 * 119.84201 * 180.27192 * 6 5 4 31 31 H 1.08998 * 113.61278 * 25.51630 * 10 8 7 32 32 H 1.09001 * 113.61843 * 254.61221 * 10 8 7 33 33 H 0.97001 * 119.99943 * 336.53290 * 13 11 10 34 34 H 1.07998 * 120.05903 * 0.02562 * 17 16 14 35 35 H 1.08994 * 109.46574 * 14.72321 * 19 18 17 36 36 H 0.96706 * 113.99908 * 299.99742 * 20 19 18 37 37 H 1.48496 * 110.00060 * 58.68431 * 21 19 18 38 38 H 1.48500 * 109.99609 * 180.02562 * 21 19 18 39 39 H 1.07998 * 119.93629 * 180.02562 * 24 22 18 40 40 H 1.07994 * 120.05855 * 180.02562 * 25 24 22 41 41 H 1.08998 * 113.61466 * 140.02891 * 26 11 10 42 42 H 1.09003 * 113.61147 * 270.92438 * 26 11 10 43 43 H 1.07997 * 120.07845 * 180.27664 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2696 -0.6199 1.0354 5 6 4.6492 -0.6160 1.0289 6 6 5.3374 -0.0036 -0.0032 7 6 4.6484 0.6179 -1.0299 8 6 5.4068 1.2870 -2.1470 9 1 4.7684 1.5624 -2.9865 10 6 6.3256 2.4253 -1.6726 11 6 7.3559 1.9132 -2.6931 12 1 8.3820 1.9352 -2.3262 13 7 7.2139 2.5134 -4.0219 14 6 8.2679 2.5495 -4.8611 15 8 9.3365 2.0845 -4.5152 16 6 8.1249 3.1552 -6.2009 17 6 9.2137 3.1889 -7.0744 18 6 9.0763 3.7604 -8.3214 19 6 10.2522 3.8031 -9.2630 20 8 10.7736 5.1326 -9.3140 21 14 9.7028 3.2857 -10.9663 22 6 7.8567 4.2909 -8.7130 23 9 7.7259 4.8445 -9.9384 24 6 6.7706 4.2550 -7.8515 25 6 6.8984 3.6907 -6.6006 26 6 6.6850 0.5353 -2.5646 27 6 3.2692 0.6216 -1.0359 28 1 2.7334 -1.1026 1.8392 29 1 5.1931 -1.0960 1.8289 30 1 6.4174 -0.0073 -0.0057 31 1 6.6489 2.3225 -0.6368 32 1 5.9423 3.4198 -1.9008 33 1 6.3613 2.8847 -4.2978 34 1 10.1629 2.7716 -6.7722 35 1 11.0262 3.1225 -8.9085 36 1 10.1377 5.7930 -9.6216 37 1 8.6251 4.1866 -11.4479 38 1 10.8536 3.3230 -11.9042 39 1 5.8227 4.6693 -8.1617 40 1 6.0518 3.6629 -5.9307 41 1 6.5916 0.0051 -3.5124 42 1 7.1063 -0.0832 -1.7722 43 1 2.7327 1.1031 -1.8400 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:43:08 Heat of formation + Delta-G solvation = 15.480383 kcal Electronic energy + Delta-G solvation = -28869.281301 eV Core-core repulsion = 24569.061040 eV Total energy + Delta-G solvation = -4300.220261 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.121 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.46150 -41.73901 -40.87235 -39.82251 -38.86178 -37.79848 -37.43092 -34.77960 -32.92243 -32.22236 -32.20602 -31.41234 -27.05791 -26.60450 -26.41100 -25.12475 -24.46993 -23.50980 -22.75870 -21.62869 -20.72553 -19.24273 -19.05636 -18.75704 -17.93760 -17.85924 -17.26419 -17.13151 -16.96302 -16.53624 -16.19679 -16.10615 -15.70557 -15.61823 -15.46494 -15.14409 -15.01932 -14.88149 -14.64021 -14.43218 -14.14487 -14.02028 -13.98637 -13.84637 -13.75319 -13.43878 -13.30807 -12.98622 -12.88240 -12.75356 -12.45458 -12.34777 -11.72559 -11.62876 -11.34789 -11.18834 -11.14932 -10.85975 -10.18189 -10.09111 -9.88209 -9.79366 -9.62331 -4.97139 -0.49922 -0.16121 0.03868 0.40893 1.20053 1.57501 1.58630 1.60019 1.93430 1.93872 2.04561 2.57839 2.85308 2.88777 2.98654 3.24053 3.45736 3.53741 3.57526 3.62396 3.75523 3.81894 3.97474 3.99016 4.05880 4.12803 4.22506 4.24041 4.33779 4.36437 4.55258 4.63918 4.74559 4.78893 4.81734 4.89342 4.91969 4.93789 5.01502 5.05484 5.09875 5.11414 5.14782 5.24642 5.38209 5.45660 5.54487 5.61709 5.72748 5.93049 6.30769 6.42076 6.48138 7.15757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.475 5.475 2 C 0.276 3.724 3 C -0.047 4.047 4 C -0.077 4.077 5 C -0.118 4.118 6 C -0.083 4.083 7 C -0.074 4.074 8 C -0.066 4.066 9 H 0.115 0.885 10 C -0.125 4.125 11 C 0.111 3.889 12 H 0.087 0.913 13 N -0.693 5.693 14 C 0.563 3.437 15 O -0.574 6.574 16 C -0.152 4.152 17 C -0.021 4.021 18 C -0.156 4.156 19 C -0.083 4.083 20 O -0.543 6.543 21 Si 0.749 3.251 22 C 0.107 3.893 23 F -0.131 7.131 24 C -0.148 4.148 25 C -0.039 4.039 26 C -0.142 4.142 27 C -0.066 4.066 28 H 0.138 0.862 29 H 0.153 0.847 30 H 0.149 0.851 31 H 0.106 0.894 32 H 0.088 0.912 33 H 0.416 0.584 34 H 0.140 0.860 35 H 0.130 0.870 36 H 0.383 0.617 37 H -0.253 1.253 38 H -0.308 1.308 39 H 0.170 0.830 40 H 0.176 0.824 41 H 0.069 0.931 42 H 0.103 0.897 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.828 -0.698 1.898 2.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.098 4.098 5 C -0.136 4.136 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.085 4.085 9 H 0.133 0.867 10 C -0.163 4.163 11 C 0.006 3.994 12 H 0.105 0.895 13 N -0.345 5.345 14 C 0.351 3.649 15 O -0.455 6.455 16 C -0.155 4.155 17 C -0.040 4.040 18 C -0.157 4.157 19 C -0.191 4.191 20 O -0.351 6.351 21 Si 0.653 3.347 22 C 0.088 3.912 23 F -0.110 7.110 24 C -0.166 4.166 25 C -0.057 4.057 26 C -0.180 4.180 27 C -0.087 4.087 28 H 0.156 0.844 29 H 0.171 0.829 30 H 0.167 0.833 31 H 0.125 0.875 32 H 0.107 0.893 33 H 0.255 0.745 34 H 0.158 0.842 35 H 0.148 0.852 36 H 0.232 0.768 37 H -0.178 1.178 38 H -0.236 1.236 39 H 0.188 0.812 40 H 0.193 0.807 41 H 0.088 0.912 42 H 0.121 0.879 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.432 -1.067 1.508 2.337 hybrid contribution 0.062 1.376 -0.205 1.393 sum -1.369 0.309 1.303 1.916 Atomic orbital electron populations 1.81321 1.13833 1.10454 1.09465 1.26181 0.93109 0.92213 0.92274 1.16111 0.82834 1.06261 0.99807 1.21404 0.95191 0.96581 0.96608 1.21373 0.93113 0.99499 0.99588 1.21601 1.01651 0.94426 0.92503 1.19694 0.92344 0.98628 0.96723 1.21680 0.94733 0.95979 0.96067 0.86677 1.23408 0.94374 0.98953 0.99527 1.21932 1.00411 0.94590 0.82513 0.89498 1.45455 1.13587 1.60398 1.15050 1.18301 0.83717 0.78124 0.84723 1.90805 1.28698 1.48674 1.77294 1.19992 0.95888 1.04962 0.94701 1.21028 0.99030 0.93662 0.90294 1.20137 0.94680 1.03529 0.97355 1.25152 0.97688 0.87610 1.08660 1.86625 1.42708 1.17143 1.88663 0.94657 0.78540 0.88805 0.72726 1.18140 0.94994 0.96841 0.81230 1.91554 1.96226 1.83169 1.40042 1.21407 0.99119 1.02283 0.93803 1.21516 0.96450 0.92310 0.95458 1.23631 0.95308 0.96279 1.02795 1.21221 0.94118 0.96662 0.96691 0.84416 0.82895 0.83307 0.87541 0.89299 0.74521 0.84217 0.85169 0.76752 1.17818 1.23622 0.81202 0.80704 0.91225 0.87872 0.83998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -4.86 18.54 19.00 0.35 -4.50 16 2 C 0.28 1.01 15.33 88.33 1.35 2.37 16 3 C -0.05 0.13 5.73 -21.36 -0.12 0.01 16 4 C -0.08 0.42 9.76 22.54 0.22 0.64 16 5 C -0.12 1.00 10.03 22.23 0.22 1.22 16 6 C -0.08 0.79 8.62 22.33 0.19 0.98 16 7 C -0.07 0.65 5.28 -19.91 -0.11 0.55 16 8 C -0.07 0.77 3.86 -10.92 -0.04 0.73 16 9 H 0.12 -1.63 8.09 -2.39 -0.02 -1.65 16 10 C -0.12 1.44 7.29 31.12 0.23 1.67 16 11 C 0.11 -0.79 4.30 45.52 0.20 -0.60 16 12 H 0.09 -0.20 7.50 -2.39 -0.02 -0.22 16 13 N -0.69 5.10 5.21 -443.01 -2.31 2.79 16 14 C 0.56 0.03 7.77 86.75 0.67 0.70 16 15 O -0.57 -5.28 15.96 -3.93 -0.06 -5.34 16 16 C -0.15 0.41 5.87 -20.09 -0.12 0.29 16 17 C -0.02 0.00 9.21 22.52 0.21 0.20 16 18 C -0.16 0.09 4.78 -19.86 -0.09 0.00 16 19 C -0.08 -0.05 2.81 71.24 0.20 0.15 16 20 O -0.54 -2.32 12.88 -148.98 -1.92 -4.24 16 21 Si 0.75 -0.01 30.81 68.60 2.11 2.10 16 22 C 0.11 -0.22 6.63 22.47 0.15 -0.07 16 23 F -0.13 -0.09 12.57 44.97 0.57 0.48 16 24 C -0.15 1.05 10.01 22.28 0.22 1.28 16 25 C -0.04 0.35 9.54 22.52 0.21 0.56 16 26 C -0.14 1.26 7.27 31.21 0.23 1.48 16 27 C -0.07 0.42 9.41 22.54 0.21 0.63 16 28 H 0.14 -0.97 8.06 -2.91 -0.02 -0.99 16 29 H 0.15 -1.87 8.06 -2.91 -0.02 -1.90 16 30 H 0.15 -1.92 6.64 -2.91 -0.02 -1.94 16 31 H 0.11 -1.28 7.73 -2.39 -0.02 -1.29 16 32 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 33 H 0.42 -5.86 6.73 -92.71 -0.62 -6.49 16 34 H 0.14 0.24 7.58 -2.91 -0.02 0.22 16 35 H 0.13 -0.15 7.76 -2.39 -0.02 -0.17 16 36 H 0.38 -0.29 8.41 -74.05 -0.62 -0.92 16 37 H -0.25 -0.86 5.27 99.48 0.52 -0.34 16 38 H -0.31 -2.43 7.11 99.48 0.71 -1.72 16 39 H 0.17 -2.00 8.06 -2.91 -0.02 -2.02 16 40 H 0.18 -2.98 6.40 -2.91 -0.02 -3.00 16 41 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 42 H 0.10 -1.02 6.31 -2.39 -0.02 -1.03 16 43 H 0.14 -1.27 8.05 -2.91 -0.02 -1.30 16 Total: 0.00 -24.81 373.50 2.48 -22.33 By element: Atomic # 1 Polarization: -26.10 SS G_CDS: -0.30 Total: -26.40 kcal Atomic # 6 Polarization: 8.75 SS G_CDS: 4.04 Total: 12.79 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -1.96 Total: -1.72 kcal Atomic # 8 Polarization: -7.60 SS G_CDS: -1.98 Total: -9.58 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.57 Total: 0.48 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: 2.11 Total: 2.10 kcal Total: -24.81 2.48 -22.33 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.810 kcal (2) G-P(sol) polarization free energy of solvation -24.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.329 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds