Wall clock time and date at job start Sun Mar 7 2021 00:44:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39612 * 120.14807 * 248.04128 * 3 2 1 5 5 C 1.37966 * 119.84544 * 180.02562 * 4 3 2 6 6 C 1.38342 * 120.15228 * 0.02562 * 5 4 3 7 7 C 1.38387 * 120.30160 * 0.25702 * 6 5 4 8 8 C 1.50700 * 119.91813 * 179.74415 * 7 6 5 9 9 H 1.08999 * 112.84518 * 191.18895 * 8 7 6 10 10 C 1.53778 * 113.61919 * 322.49806 * 8 7 6 11 11 C 1.53779 * 87.08020 * 139.98312 * 10 8 7 12 12 H 1.09007 * 113.61181 * 220.01679 * 11 10 8 13 13 N 1.46499 * 113.69003 * 89.13150 * 11 10 8 14 14 C 1.34774 * 120.00311 * 107.46371 * 13 11 10 15 15 O 1.21598 * 119.99875 * 359.97438 * 14 13 11 16 16 C 1.47558 * 120.00129 * 179.97438 * 14 13 11 17 17 C 1.39826 * 120.00127 * 359.72848 * 16 14 13 18 18 C 1.36567 * 120.00035 * 179.69242 * 17 16 14 19 19 C 1.39826 * 119.99675 * 0.57736 * 18 17 16 20 20 C 1.47559 * 119.99405 * 179.69354 * 19 18 17 21 21 C 1.34977 * 125.28321 * 0.02695 * 20 19 18 22 22 C 1.37790 * 114.70377 * 179.97438 * 21 20 19 23 23 C 1.33740 * 115.08415 * 359.97438 * 22 21 20 24 24 C 1.50698 * 125.12031 * 180.02562 * 23 22 21 25 25 O 1.42903 * 109.47259 * 299.99473 * 24 23 22 26 26 Si 1.86306 * 109.47104 * 179.97438 * 24 23 22 27 27 S 1.75863 * 109.75874 * 359.75411 * 23 22 21 28 28 C 1.39820 * 120.00020 * 359.71770 * 19 18 17 29 29 C 1.36556 * 120.00599 * 359.97438 * 28 19 18 30 30 C 1.53775 * 87.08489 * 334.56688 * 11 10 8 31 31 C 1.37920 * 120.15324 * 359.47876 * 7 6 5 32 32 H 1.08005 * 120.07894 * 0.05289 * 4 3 2 33 33 H 1.08003 * 119.92610 * 179.97438 * 5 4 3 34 34 H 1.08002 * 119.84559 * 179.97438 * 6 5 4 35 35 H 1.09000 * 113.61285 * 254.53298 * 10 8 7 36 36 H 1.09002 * 113.61019 * 25.43193 * 10 8 7 37 37 H 0.96997 * 119.99774 * 287.45856 * 13 11 10 38 38 H 1.08006 * 120.00319 * 359.97438 * 17 16 14 39 39 H 1.08004 * 120.00244 * 180.29443 * 18 17 16 40 40 H 1.08008 * 122.64526 * 359.97438 * 21 20 19 41 41 H 1.08001 * 122.45816 * 179.97438 * 22 21 20 42 42 H 1.08996 * 109.47209 * 59.99782 * 24 23 22 43 43 H 0.96699 * 114.00055 * 300.00507 * 25 24 23 44 44 H 1.48502 * 109.99708 * 58.68027 * 26 24 23 45 45 H 1.48497 * 110.00111 * 179.97438 * 26 24 23 46 46 H 1.08001 * 119.99279 * 179.97438 * 28 19 18 47 47 H 1.07999 * 120.00130 * 179.97438 * 29 28 19 48 48 H 1.08996 * 113.62054 * 270.88492 * 30 11 10 49 49 H 1.08998 * 113.61718 * 139.97884 * 30 11 10 50 50 H 1.08002 * 120.07871 * 180.25451 * 31 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2690 0.4524 1.1197 5 6 4.6487 0.4508 1.1127 6 6 5.3375 0.0034 -0.0005 7 6 4.6489 -0.4403 -1.1159 8 6 5.4079 -0.9203 -2.3261 9 1 4.7696 -1.0579 -3.1989 10 6 6.6832 -0.1109 -2.6146 11 6 7.3583 -1.4478 -2.9637 12 1 8.3840 -1.5262 -2.6032 13 7 7.2198 -1.8270 -4.3720 14 6 8.2830 -1.7550 -5.1970 15 8 9.3572 -1.3748 -4.7726 16 6 8.1436 -2.1375 -6.6154 17 6 6.9097 -2.5800 -7.1021 18 6 6.7791 -2.9280 -8.4162 19 6 7.8823 -2.8533 -9.2721 20 6 7.7428 -3.2358 -10.6904 21 6 6.6051 -3.6703 -11.2725 22 6 6.7212 -3.9675 -12.6129 23 6 7.9395 -3.7803 -13.1318 24 6 8.3182 -4.0328 -14.5684 25 8 8.0898 -5.4070 -14.8868 26 14 10.1200 -3.6286 -14.8159 27 16 9.0312 -3.1878 -11.8868 28 6 9.1176 -2.4167 -8.7840 29 6 9.2467 -2.0627 -7.4714 30 6 6.3278 -2.1192 -2.0407 31 6 3.2697 -0.4492 -1.1205 32 1 2.7326 0.8019 1.9895 33 1 5.1923 0.8004 1.9780 34 1 6.4175 0.0047 -0.0008 35 1 6.5883 0.5654 -3.4641 36 1 7.1024 0.3726 -1.7321 37 1 6.3628 -2.1299 -4.7106 38 1 6.0588 -2.6423 -6.4399 39 1 5.8249 -3.2653 -8.7933 40 1 5.6770 -3.7765 -10.7303 41 1 5.8893 -4.3253 -13.2014 42 1 7.7121 -3.4033 -15.2199 43 1 8.5978 -6.0260 -14.3447 44 1 10.9554 -4.4574 -13.9102 45 1 10.5061 -3.8740 -16.2286 46 1 9.9697 -2.3594 -9.4451 47 1 10.2010 -1.7258 -7.0943 48 1 6.6498 -2.1848 -1.0014 49 1 5.9460 -3.0642 -2.4269 50 1 2.7336 -0.7996 -1.9902 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_13308390.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:44:17 Heat of formation + Delta-G solvation = 79.256585 kcal Electronic energy + Delta-G solvation = -33514.634505 eV Core-core repulsion = 28951.806209 eV Total energy + Delta-G solvation = -4562.828296 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.119 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -41.87927 -41.03445 -40.06499 -39.32998 -38.78612 -37.51366 -37.31784 -34.85640 -33.51872 -32.46407 -32.41240 -31.91164 -30.48160 -27.49495 -26.90824 -26.33867 -25.11986 -24.65013 -24.01616 -23.50894 -22.97050 -21.89142 -20.86193 -20.34575 -19.27420 -19.16045 -18.64958 -17.73992 -17.50612 -17.25785 -16.79851 -16.68598 -16.38331 -16.26109 -16.23073 -16.09861 -15.87484 -15.50703 -15.24898 -15.11233 -15.01281 -14.79396 -14.54741 -14.47196 -14.25012 -14.17332 -14.06215 -13.83779 -13.73030 -13.67810 -13.65956 -13.37595 -13.17956 -13.05386 -12.96484 -12.69805 -12.58932 -12.37344 -12.17094 -11.99901 -11.87768 -11.57620 -11.41303 -11.02078 -10.90761 -10.68170 -10.26744 -10.18786 -10.08923 -9.85589 -9.60640 -9.08686 -5.14329 -0.94018 -0.32444 0.15179 0.20385 0.27066 0.33229 0.70041 1.14497 1.49609 1.52289 1.67968 1.83502 1.88956 1.94996 1.95923 2.74611 2.78703 2.81406 3.19912 3.25684 3.35296 3.47823 3.52659 3.56442 3.61171 3.65669 3.69241 3.73910 3.77938 3.91033 3.94767 4.08487 4.09858 4.21940 4.29848 4.30575 4.41978 4.45293 4.49122 4.53236 4.54372 4.58924 4.68895 4.75815 4.81306 4.82352 4.86638 4.92162 4.95737 5.03445 5.15364 5.15999 5.19901 5.21305 5.23876 5.33989 5.40037 5.48216 5.65854 5.66288 6.23348 6.36015 6.48830 7.11824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.144 4.144 11 C 0.119 3.881 12 H 0.108 0.892 13 N -0.710 5.710 14 C 0.563 3.437 15 O -0.530 6.530 16 C -0.137 4.137 17 C -0.078 4.078 18 C -0.110 4.110 19 C 0.014 3.986 20 C -0.149 4.149 21 C -0.119 4.119 22 C -0.104 4.104 23 C -0.217 4.217 24 C -0.033 4.033 25 O -0.523 6.523 26 Si 0.649 3.351 27 S 0.134 5.866 28 C -0.120 4.120 29 C -0.048 4.048 30 C -0.136 4.136 31 C -0.067 4.067 32 H 0.133 0.867 33 H 0.135 0.865 34 H 0.132 0.868 35 H 0.077 0.923 36 H 0.098 0.902 37 H 0.401 0.599 38 H 0.130 0.870 39 H 0.134 0.866 40 H 0.145 0.855 41 H 0.146 0.854 42 H 0.128 0.872 43 H 0.378 0.622 44 H -0.240 1.240 45 H -0.234 1.234 46 H 0.131 0.869 47 H 0.142 0.858 48 H 0.101 0.899 49 H 0.079 0.921 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.125 0.309 0.129 2.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.072 4.072 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.182 4.182 11 C 0.014 3.986 12 H 0.126 0.874 13 N -0.362 5.362 14 C 0.351 3.649 15 O -0.407 6.407 16 C -0.141 4.141 17 C -0.097 4.097 18 C -0.130 4.130 19 C 0.012 3.988 20 C -0.266 4.266 21 C -0.149 4.149 22 C -0.135 4.135 23 C -0.334 4.334 24 C -0.145 4.145 25 O -0.330 6.330 26 Si 0.547 3.453 27 S 0.402 5.598 28 C -0.139 4.139 29 C -0.067 4.067 30 C -0.174 4.174 31 C -0.088 4.088 32 H 0.151 0.849 33 H 0.153 0.847 34 H 0.150 0.850 35 H 0.096 0.904 36 H 0.116 0.884 37 H 0.236 0.764 38 H 0.147 0.853 39 H 0.152 0.848 40 H 0.162 0.838 41 H 0.163 0.837 42 H 0.146 0.854 43 H 0.226 0.774 44 H -0.164 1.164 45 H -0.157 1.157 46 H 0.149 0.851 47 H 0.160 0.840 48 H 0.120 0.880 49 H 0.097 0.903 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.090 0.940 -0.252 3.240 hybrid contribution -1.975 -1.613 0.135 2.554 sum 1.115 -0.673 -0.117 1.308 Atomic orbital electron populations 1.81313 1.12066 1.08193 1.07127 1.25747 0.92703 0.94023 0.94091 1.15987 0.84295 1.05803 0.96756 1.21244 0.94535 0.96875 0.96767 1.21134 0.93571 0.99714 0.98875 1.21313 1.00682 0.96200 0.92349 1.19585 0.92717 0.99248 0.95623 1.21640 0.95143 0.96982 0.95614 0.88165 1.23588 0.94918 0.96903 1.02822 1.21864 1.00893 0.95288 0.80604 0.87376 1.45574 1.12930 1.68158 1.09532 1.18203 0.83824 0.77282 0.85585 1.90816 1.26730 1.46220 1.76951 1.19983 0.95139 1.05303 0.93631 1.20950 0.96293 0.96725 0.95704 1.20873 0.98412 1.00705 0.92988 1.18302 0.94014 0.96782 0.89713 1.23088 0.97716 1.09290 0.96485 1.20389 0.98452 1.01391 0.94703 1.20001 0.97332 1.01317 0.94804 1.25042 0.97783 1.10325 1.00267 1.24376 1.12874 0.86007 0.91262 1.86630 1.69072 1.14601 1.62675 0.95237 0.74204 0.91901 0.83957 1.84172 1.12553 1.63861 0.99239 1.20979 0.96692 1.00232 0.95973 1.20948 0.98670 0.94826 0.92236 1.23451 0.95502 0.97588 1.00823 1.21073 0.93653 0.97198 0.96859 0.84904 0.84670 0.84973 0.90434 0.88374 0.76355 0.85261 0.84816 0.83766 0.83658 0.85436 0.77395 1.16376 1.15705 0.85119 0.84018 0.88047 0.90281 0.85045 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.93 18.54 41.84 0.78 -1.16 16 2 C 0.25 0.44 15.33 -22.47 -0.34 0.10 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 5 C -0.11 0.36 10.03 -39.64 -0.40 -0.03 16 6 C -0.09 0.29 8.60 -39.49 -0.34 -0.05 16 7 C -0.07 0.22 5.28 -104.68 -0.55 -0.34 16 8 C -0.08 0.31 3.86 -90.96 -0.35 -0.04 16 9 H 0.10 -0.49 8.09 -51.93 -0.42 -0.91 16 10 C -0.14 0.45 7.25 -25.92 -0.19 0.26 16 11 C 0.12 -0.28 4.32 -67.12 -0.29 -0.57 16 12 H 0.11 -0.07 7.46 -51.92 -0.39 -0.46 16 13 N -0.71 1.45 5.22 -54.05 -0.28 1.17 16 14 C 0.56 0.63 7.76 -12.46 -0.10 0.54 16 15 O -0.53 -2.59 15.93 5.28 0.08 -2.51 16 16 C -0.14 -0.01 5.88 -104.91 -0.62 -0.62 16 17 C -0.08 0.16 9.48 -39.59 -0.38 -0.21 16 18 C -0.11 0.18 9.48 -39.59 -0.38 -0.20 16 19 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 20 C -0.15 0.02 6.37 -36.94 -0.24 -0.22 16 21 C -0.12 0.09 9.64 -40.90 -0.39 -0.30 16 22 C -0.10 0.05 10.00 -41.32 -0.41 -0.37 16 23 C -0.22 0.10 5.73 -35.89 -0.21 -0.10 16 24 C -0.03 0.03 2.96 36.00 0.11 0.14 16 25 O -0.52 -0.21 12.86 -35.23 -0.45 -0.66 16 26 Si 0.65 -0.77 30.96 -169.99 -5.26 -6.03 16 27 S 0.13 -0.08 19.46 -107.50 -2.09 -2.17 16 28 C -0.12 0.01 9.54 -39.60 -0.38 -0.36 16 29 C -0.05 -0.02 9.53 -39.59 -0.38 -0.40 16 30 C -0.14 0.56 7.29 -25.92 -0.19 0.37 16 31 C -0.07 0.14 9.41 -39.17 -0.37 -0.23 16 32 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 33 H 0.14 -0.66 8.06 -52.48 -0.42 -1.08 16 34 H 0.13 -0.65 6.64 -52.49 -0.35 -1.00 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.10 -0.37 6.30 -51.93 -0.33 -0.69 16 37 H 0.40 -1.84 6.71 -40.82 -0.27 -2.11 16 38 H 0.13 -0.66 6.38 -52.48 -0.34 -0.99 16 39 H 0.13 -0.48 6.74 -52.48 -0.35 -0.83 16 40 H 0.14 -0.39 6.88 -52.48 -0.36 -0.75 16 41 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.13 -0.23 7.96 -51.93 -0.41 -0.65 16 43 H 0.38 -0.87 8.70 45.56 0.40 -0.48 16 44 H -0.24 -0.15 7.11 56.52 0.40 0.25 16 45 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 46 H 0.13 -0.16 7.26 -52.49 -0.38 -0.54 16 47 H 0.14 0.08 7.64 -52.49 -0.40 -0.32 16 48 H 0.10 -0.45 7.72 -51.93 -0.40 -0.85 16 49 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 50 H 0.13 -0.43 8.05 -52.49 -0.42 -0.86 16 LS Contribution 439.29 15.07 6.62 6.62 Total: 0.00 -9.48 439.29 -14.34 -23.82 By element: Atomic # 1 Polarization: -9.27 SS G_CDS: -5.74 Total: -15.01 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: -7.99 Total: -4.08 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: 0.49 Total: 0.01 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.37 Total: -3.17 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.26 Total: -6.03 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.09 Total: -2.17 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -9.48 -14.34 -23.82 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13308390.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.081 kcal (2) G-P(sol) polarization free energy of solvation -9.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.825 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.257 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds