Wall clock time and date at job start Sun Mar 7 2021 00:44:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39618 * 120.14619 * 212.94716 * 3 2 1 5 5 C 1.37973 * 119.83945 * 179.97438 * 4 3 2 6 6 C 1.38338 * 120.15220 * 359.74061 * 5 4 3 7 7 C 1.38376 * 120.30682 * 0.51344 * 6 5 4 8 8 C 1.50703 * 119.92797 * 179.76031 * 7 6 5 9 9 H 1.08992 * 112.91264 * 168.47375 * 8 7 6 10 10 C 1.53777 * 113.61522 * 299.72927 * 8 7 6 11 11 C 1.53783 * 87.08289 * 139.97535 * 10 8 7 12 12 H 1.09001 * 113.61445 * 219.93224 * 11 10 8 13 13 N 1.46495 * 113.61218 * 89.11587 * 11 10 8 14 14 C 1.34773 * 120.00101 * 155.00434 * 13 11 10 15 15 O 1.21591 * 120.00109 * 359.97438 * 14 13 11 16 16 C 1.47538 * 120.00302 * 179.97438 * 14 13 11 17 17 C 1.40133 * 120.19302 * 180.02562 * 16 14 13 18 18 O 1.35660 * 120.15161 * 359.95737 * 17 16 14 19 19 C 1.38710 * 119.70194 * 179.97438 * 17 16 14 20 20 C 1.38053 * 120.08112 * 0.02894 * 19 17 16 21 21 C 1.50703 * 119.80424 * 179.97438 * 20 19 17 22 22 O 1.42903 * 109.47410 * 64.99287 * 21 20 19 23 23 Si 1.86295 * 109.47446 * 184.99647 * 21 20 19 24 24 C 1.38549 * 120.39049 * 359.67216 * 20 19 17 25 25 C 1.37782 * 120.30015 * 0.61008 * 24 20 19 26 26 C 1.53782 * 87.07959 * 334.56589 * 11 10 8 27 27 C 1.37929 * 120.14989 * 359.48815 * 7 6 5 28 28 H 1.07999 * 120.07760 * 359.97438 * 4 3 2 29 29 H 1.07998 * 119.91909 * 180.02562 * 5 4 3 30 30 H 1.08004 * 119.84629 * 180.27534 * 6 5 4 31 31 H 1.09008 * 113.61436 * 25.42911 * 10 8 7 32 32 H 1.08997 * 113.69530 * 254.53628 * 10 8 7 33 33 H 0.96999 * 120.00282 * 334.99709 * 13 11 10 34 34 H 0.96695 * 113.99619 * 89.99571 * 18 17 16 35 35 H 1.07997 * 119.96011 * 180.02562 * 19 17 16 36 36 H 1.09005 * 109.46470 * 304.99500 * 21 20 19 37 37 H 0.96693 * 114.00282 * 180.02562 * 22 21 20 38 38 H 1.48493 * 110.00219 * 178.67460 * 23 21 20 39 39 H 1.48499 * 110.00185 * 300.00281 * 23 21 20 40 40 H 1.08000 * 119.84792 * 180.32629 * 24 20 19 41 41 H 1.08002 * 120.04937 * 179.69942 * 25 24 20 42 42 H 1.08999 * 113.61069 * 139.97822 * 26 11 10 43 43 H 1.09002 * 113.61560 * 270.88155 * 26 11 10 44 44 H 1.08003 * 120.07533 * 180.26972 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2688 1.0141 0.6566 5 6 4.6485 1.0082 0.6531 6 6 5.3374 -0.0016 0.0055 7 6 4.6492 -1.0062 -0.6517 8 6 5.4083 -2.0992 -1.3590 9 1 4.7715 -2.9297 -1.6633 10 6 6.3275 -1.5851 -2.4795 11 6 7.3588 -2.6208 -2.0014 12 1 8.3844 -2.2518 -2.0100 13 7 7.2194 -3.9287 -2.6464 14 6 8.2825 -4.7520 -2.7373 15 8 9.3575 -4.4090 -2.2844 16 6 8.1420 -6.0694 -3.3865 17 6 9.2447 -6.9288 -3.4827 18 8 10.4474 -6.5531 -2.9800 19 6 9.1010 -8.1654 -4.0946 20 6 7.8767 -8.5460 -4.6065 21 6 7.7278 -9.8906 -5.2706 22 8 7.9359 -10.9240 -4.3058 23 14 6.0141 -10.0440 -5.9850 24 6 6.7826 -7.7017 -4.5079 25 6 6.9088 -6.4675 -3.9085 26 6 6.6842 -2.5392 -0.6218 27 6 3.2699 -1.0127 -0.6561 28 1 2.7321 1.8007 1.1661 29 1 5.1918 1.7913 1.1609 30 1 6.4174 -0.0038 0.0096 31 1 6.6491 -0.5528 -2.3413 32 1 5.9465 -1.7791 -3.4821 33 1 6.3619 -4.2022 -3.0080 34 1 10.5833 -6.8042 -2.0562 35 1 9.9479 -8.8311 -4.1707 36 1 8.4640 -9.9850 -6.0688 37 1 7.8555 -11.8186 -4.6641 38 1 5.8649 -11.3528 -6.6705 39 1 5.0010 -9.9168 -4.9068 40 1 5.8277 -8.0105 -4.9067 41 1 6.0544 -5.8106 -3.8381 42 1 6.5901 -3.5044 -0.1241 43 1 7.1034 -1.7678 0.0243 44 1 2.7340 -1.7998 -1.1658 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_13422076.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:44:20 Heat of formation + Delta-G solvation = 9.833001 kcal Electronic energy + Delta-G solvation = -28804.378128 eV Core-core repulsion = 24654.684761 eV Total energy + Delta-G solvation = -4149.693367 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.130 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.83750 -41.09837 -40.00335 -38.92296 -38.31465 -37.42920 -37.27796 -34.70122 -32.91829 -32.21920 -31.66266 -31.09433 -27.68718 -26.61918 -26.06613 -24.86270 -23.84196 -23.51200 -22.74035 -21.72451 -20.71290 -19.27848 -18.98934 -18.63691 -18.58902 -17.52961 -17.27679 -16.78959 -16.62678 -16.41138 -16.26380 -15.94437 -15.69513 -15.53160 -15.40466 -15.14019 -14.93948 -14.68940 -14.31640 -14.15492 -14.07250 -14.00245 -13.94805 -13.75282 -13.40404 -13.28780 -12.96363 -12.90747 -12.75940 -12.53563 -12.46443 -12.13219 -11.72957 -11.63597 -11.61860 -11.16789 -10.88798 -10.55855 -10.18154 -9.96549 -9.88987 -9.75795 -9.63437 -4.90196 -0.39631 -0.17248 0.16748 0.39687 1.27741 1.57685 1.62814 1.72085 1.92423 1.96540 2.06327 2.55909 2.84260 2.87695 3.15398 3.28180 3.53069 3.60922 3.73033 3.75247 3.80931 3.82617 3.96377 4.04736 4.12400 4.21051 4.22152 4.28250 4.32384 4.35030 4.53969 4.62402 4.73677 4.77017 4.81519 4.87230 4.93109 5.02732 5.04376 5.08977 5.11922 5.15121 5.24321 5.28013 5.37003 5.44672 5.55369 5.60497 5.71876 5.91754 6.41148 6.51084 6.54832 6.71769 7.20732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.276 3.724 3 C -0.046 4.046 4 C -0.077 4.077 5 C -0.117 4.117 6 C -0.084 4.084 7 C -0.074 4.074 8 C -0.066 4.066 9 H 0.114 0.886 10 C -0.124 4.124 11 C 0.111 3.889 12 H 0.085 0.915 13 N -0.696 5.696 14 C 0.560 3.440 15 O -0.562 6.562 16 C -0.180 4.180 17 C 0.152 3.848 18 O -0.496 6.496 19 C -0.141 4.141 20 C -0.035 4.035 21 C -0.097 4.097 22 O -0.558 6.558 23 Si 0.775 3.225 24 C -0.136 4.136 25 C -0.052 4.052 26 C -0.142 4.142 27 C -0.067 4.067 28 H 0.139 0.861 29 H 0.154 0.846 30 H 0.149 0.851 31 H 0.107 0.893 32 H 0.089 0.911 33 H 0.414 0.586 34 H 0.406 0.594 35 H 0.135 0.865 36 H 0.096 0.904 37 H 0.397 0.603 38 H -0.291 1.291 39 H -0.286 1.286 40 H 0.158 0.842 41 H 0.171 0.829 42 H 0.066 0.934 43 H 0.104 0.896 44 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.448 -0.312 -3.407 3.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.135 4.135 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.084 4.084 9 H 0.132 0.868 10 C -0.162 4.162 11 C 0.006 3.994 12 H 0.103 0.897 13 N -0.348 5.348 14 C 0.348 3.652 15 O -0.442 6.442 16 C -0.184 4.184 17 C 0.106 3.894 18 O -0.309 6.309 19 C -0.160 4.160 20 C -0.036 4.036 21 C -0.205 4.205 22 O -0.368 6.368 23 Si 0.679 3.321 24 C -0.153 4.153 25 C -0.070 4.070 26 C -0.180 4.180 27 C -0.087 4.087 28 H 0.157 0.843 29 H 0.172 0.828 30 H 0.166 0.834 31 H 0.125 0.875 32 H 0.107 0.893 33 H 0.253 0.747 34 H 0.266 0.734 35 H 0.153 0.847 36 H 0.114 0.886 37 H 0.248 0.752 38 H -0.218 1.218 39 H -0.214 1.214 40 H 0.176 0.824 41 H 0.188 0.812 42 H 0.085 0.915 43 H 0.122 0.878 44 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.113 0.245 -3.243 3.437 hybrid contribution 0.604 -1.547 0.956 1.916 sum -0.509 -1.301 -2.287 2.680 Atomic orbital electron populations 1.81323 1.13794 1.09516 1.10370 1.26170 0.93092 0.92280 0.92228 1.16102 0.82861 1.00206 1.05803 1.21408 0.95169 0.96595 0.96546 1.21375 0.93126 0.99539 0.99482 1.21595 1.01634 0.92647 0.94335 1.19685 0.92373 0.96824 0.98506 1.21617 0.94681 0.96196 0.95915 0.86805 1.23410 0.94309 0.99286 0.99196 1.21911 1.00341 0.83122 0.94029 0.89651 1.45459 1.12659 1.17014 1.59702 1.18232 0.83924 0.84435 0.78615 1.90810 1.28090 1.76099 1.49154 1.20450 0.95358 0.95979 1.06567 1.18728 0.84376 0.91241 0.95041 1.84710 1.31544 1.81725 1.32940 1.21352 0.98803 0.95088 1.00731 1.19598 0.93129 0.94681 0.96185 1.25213 1.14548 0.86174 0.94579 1.86535 1.93599 1.18596 1.38076 0.93990 0.72150 0.84715 0.81223 1.21226 0.98724 0.94465 1.00870 1.21472 0.95787 0.96141 0.93636 1.23588 0.95457 1.02621 0.96370 1.21214 0.94082 0.96727 0.96693 0.84318 0.82833 0.83367 0.87492 0.89286 0.74722 0.73385 0.84726 0.88591 0.75221 1.21790 1.21350 0.82444 0.81154 0.91523 0.87815 0.84043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -5.12 18.54 19.00 0.35 -4.77 16 2 C 0.28 1.20 15.33 88.33 1.35 2.55 16 3 C -0.05 0.09 5.73 -21.36 -0.12 -0.03 16 4 C -0.08 0.36 9.76 22.54 0.22 0.58 16 5 C -0.12 0.90 10.03 22.23 0.22 1.12 16 6 C -0.08 0.69 8.62 22.33 0.19 0.89 16 7 C -0.07 0.55 5.28 -19.90 -0.11 0.45 16 8 C -0.07 0.64 3.85 -11.01 -0.04 0.60 16 9 H 0.11 -1.38 8.09 -2.39 -0.02 -1.40 16 10 C -0.12 1.19 7.29 31.12 0.23 1.42 16 11 C 0.11 -0.52 4.32 45.52 0.20 -0.33 16 12 H 0.09 0.04 7.46 -2.39 -0.02 0.02 16 13 N -0.70 2.87 5.21 -443.20 -2.31 0.56 16 14 C 0.56 2.24 7.76 86.70 0.67 2.91 16 15 O -0.56 -7.09 14.76 16.92 0.25 -6.84 16 16 C -0.18 -0.35 5.89 -20.01 -0.12 -0.46 16 17 C 0.15 0.78 6.72 22.84 0.15 0.94 16 18 O -0.50 -3.78 11.58 -68.84 -0.80 -4.58 16 19 C -0.14 -0.41 9.60 22.34 0.21 -0.19 16 20 C -0.04 0.02 5.39 -19.83 -0.11 -0.09 16 21 C -0.10 0.32 2.78 71.24 0.20 0.52 16 22 O -0.56 0.09 12.81 -148.98 -1.91 -1.82 16 23 Si 0.78 -4.50 29.84 68.60 2.05 -2.46 16 24 C -0.14 0.57 8.64 22.24 0.19 0.76 16 25 C -0.05 0.26 9.54 22.52 0.21 0.47 16 26 C -0.14 0.97 7.25 31.12 0.23 1.19 16 27 C -0.07 0.35 9.41 22.54 0.21 0.56 16 28 H 0.14 -0.90 8.06 -2.91 -0.02 -0.93 16 29 H 0.15 -1.77 8.06 -2.91 -0.02 -1.80 16 30 H 0.15 -1.73 6.63 -2.91 -0.02 -1.75 16 31 H 0.11 -1.11 7.73 -2.38 -0.02 -1.13 16 32 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 33 H 0.41 -4.44 6.73 -92.71 -0.62 -5.06 16 34 H 0.41 0.41 9.06 -74.06 -0.67 -0.26 16 35 H 0.13 0.35 8.06 -2.91 -0.02 0.32 16 36 H 0.10 -0.62 7.96 -2.38 -0.02 -0.64 16 37 H 0.40 -3.15 8.74 -74.06 -0.65 -3.80 16 38 H -0.29 0.19 7.11 99.48 0.71 0.89 16 39 H -0.29 0.04 7.03 99.48 0.70 0.74 16 40 H 0.16 -1.41 4.83 -2.91 -0.01 -1.43 16 41 H 0.17 -2.25 6.40 -2.91 -0.02 -2.27 16 42 H 0.07 -0.29 8.14 -2.39 -0.02 -0.30 16 43 H 0.10 -0.84 6.29 -2.39 -0.01 -0.86 16 44 H 0.14 -1.10 8.05 -2.91 -0.02 -1.12 16 Total: 0.00 -28.63 378.51 0.83 -27.80 By element: Atomic # 1 Polarization: -20.94 SS G_CDS: -0.81 Total: -21.75 kcal Atomic # 6 Polarization: 9.85 SS G_CDS: 4.00 Total: 13.86 kcal Atomic # 7 Polarization: -2.25 SS G_CDS: -1.96 Total: -4.21 kcal Atomic # 8 Polarization: -10.78 SS G_CDS: -2.46 Total: -13.24 kcal Atomic # 14 Polarization: -4.50 SS G_CDS: 2.05 Total: -2.46 kcal Total: -28.63 0.83 -27.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13422076.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.632 kcal (2) G-P(sol) polarization free energy of solvation -28.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.799 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds