Wall clock time and date at job start Sun Mar 7 2021 00:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37870 * 126.45468 * 2 1 4 4 C 1.46684 * 126.23813 * 0.02562 * 3 2 1 5 5 O 1.21689 * 119.99555 * 0.20355 * 4 3 2 6 6 N 1.34767 * 120.00109 * 180.20001 * 4 3 2 7 7 C 1.46504 * 120.00038 * 179.97438 * 6 4 3 8 8 H 1.08996 * 112.84819 * 25.33736 * 7 6 4 9 9 C 1.53776 * 113.61636 * 156.53115 * 7 6 4 10 10 C 1.53786 * 87.08304 * 89.11989 * 9 7 6 11 11 H 1.09000 * 113.61059 * 270.88615 * 10 9 7 12 12 C 1.50698 * 113.61550 * 139.98239 * 10 9 7 13 13 C 1.37925 * 119.92266 * 119.99997 * 12 10 9 14 14 C 1.39651 * 119.84368 * 179.97438 * 13 12 10 15 15 C 1.43198 * 120.14764 * 180.02562 * 14 13 12 16 16 N 9.92525 * 163.01554 * 68.04287 * 4 1 2 17 17 C 1.39607 * 119.70189 * 0.02562 * 14 13 12 18 18 C 1.37970 * 119.84728 * 0.02562 * 17 14 13 19 19 C 1.38348 * 120.14909 * 359.74491 * 18 17 14 20 20 C 1.53779 * 113.61696 * 254.13912 * 7 6 4 21 21 N 1.37652 * 107.53360 * 180.18240 * 3 2 1 22 22 C 1.35537 * 108.64067 * 359.60376 * 21 3 2 23 23 C 1.50696 * 125.56448 * 180.24547 * 22 21 3 24 24 O 1.42908 * 109.46996 * 64.99875 * 23 22 21 25 25 Si 1.86294 * 109.47352 * 184.99830 * 23 22 21 26 26 C 1.35453 * 108.87115 * 0.24461 * 22 21 3 27 27 H 1.09005 * 109.46854 * 270.27263 * 1 2 3 28 28 H 1.09000 * 109.47637 * 30.26805 * 1 2 3 29 29 H 1.09002 * 109.47267 * 150.27557 * 1 2 3 30 30 H 0.97004 * 120.00206 * 0.02562 * 6 4 3 31 31 H 1.09002 * 113.61937 * 203.66479 * 9 7 6 32 32 H 1.09008 * 113.61300 * 334.48729 * 9 7 6 33 33 H 1.08000 * 120.07643 * 359.96009 * 13 12 10 34 34 H 1.08005 * 120.08201 * 179.97438 * 17 14 13 35 35 H 1.07994 * 119.92682 * 180.02562 * 18 17 14 36 36 H 1.07997 * 119.85147 * 180.28188 * 19 18 17 37 37 H 1.09005 * 113.61257 * 25.43578 * 20 7 6 38 38 H 1.08998 * 113.61415 * 156.32848 * 20 7 6 39 39 H 0.97001 * 125.68311 * 179.87760 * 21 3 2 40 40 H 1.09000 * 109.47355 * 305.00392 * 23 22 21 41 41 H 0.96702 * 113.99676 * 179.97438 * 24 23 22 42 42 H 1.48507 * 110.00417 * 178.67938 * 25 23 22 43 43 H 1.48499 * 110.00336 * 300.00445 * 25 23 22 44 44 H 1.08003 * 126.06703 * 179.97438 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5094 0.0005 5 8 0.7027 2.7766 0.0048 6 7 2.8036 3.4999 -0.0036 7 6 2.3678 4.8986 -0.0036 8 1 1.3766 5.0330 0.4294 9 6 3.4203 5.8719 0.5529 10 6 3.9606 5.9847 -0.8825 11 1 4.7203 5.2410 -1.1227 12 6 4.3675 7.3841 -1.2661 13 6 5.6701 7.6444 -1.6373 14 6 6.0453 8.9417 -1.9930 15 6 7.3958 9.2192 -2.3800 16 7 8.4663 9.4403 -2.6870 17 6 5.0978 9.9668 -1.9695 18 6 3.7985 9.6925 -1.5951 19 6 3.4325 8.4041 -1.2486 20 6 2.5476 5.5999 -1.3604 21 7 3.6283 0.6626 -0.0042 22 6 3.6217 -0.6928 0.0022 23 6 4.8433 -1.5752 0.0056 24 8 5.5635 -1.3868 1.2255 25 14 4.3221 -3.3579 -0.1388 26 6 2.3379 -1.1246 0.0049 27 1 -0.3633 0.0049 1.0277 28 1 -0.3634 0.8875 -0.5180 29 1 -0.3634 -0.8925 -0.5096 30 1 3.7500 3.2868 -0.0073 31 1 2.9972 6.8012 0.9344 32 1 4.1193 5.4078 1.2488 33 1 6.3982 6.8469 -1.6527 34 1 5.3814 10.9724 -2.2430 35 1 3.0645 10.4844 -1.5769 36 1 2.4131 8.1939 -0.9606 37 1 2.5432 4.9161 -2.2093 38 1 1.8862 6.4548 -1.5010 39 1 4.4191 1.2244 -0.0068 40 1 5.4826 -1.3141 -0.8377 41 1 6.3637 -1.9251 1.2970 42 1 5.5191 -4.2364 -0.1686 43 1 3.4499 -3.7264 1.0052 44 1 2.0136 -2.1548 0.0095 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_13940406.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:44:43 Heat of formation + Delta-G solvation = 60.506360 kcal Electronic energy + Delta-G solvation = -27441.069602 eV Core-core repulsion = 23519.518399 eV Total energy + Delta-G solvation = -3921.551202 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.142 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.60050 -41.44615 -40.23077 -38.94069 -37.82250 -37.47980 -34.86058 -33.47665 -32.25243 -32.23645 -31.39979 -28.22162 -27.24610 -26.67713 -25.89754 -24.84476 -23.03804 -22.61600 -21.56499 -20.79015 -20.30345 -19.46194 -18.96638 -18.62850 -17.34159 -17.10184 -16.82790 -16.57062 -16.44361 -15.96851 -15.80582 -15.38539 -15.21041 -15.01585 -14.89250 -14.70480 -14.59466 -14.18400 -14.14056 -13.99600 -13.95425 -13.79081 -13.58445 -13.42228 -13.30186 -13.11025 -12.97754 -12.78984 -12.51231 -12.44957 -11.99023 -11.77909 -11.70170 -11.23028 -11.11432 -10.62042 -10.20031 -9.92237 -9.82342 -9.67769 -9.18275 -4.84202 -0.20262 0.29691 0.36485 1.21399 1.51584 1.54962 1.65237 1.89540 1.94179 2.01686 2.19534 2.25851 2.81237 2.84418 3.26441 3.46803 3.69034 3.71766 3.78939 3.82988 3.92192 3.99183 4.13706 4.15956 4.16966 4.18911 4.31008 4.42028 4.50425 4.67856 4.72309 4.75799 4.81267 4.83260 4.87513 4.91959 4.98581 5.03947 5.06871 5.15509 5.18475 5.33696 5.35395 5.41427 5.49361 5.63358 5.68017 5.85337 5.88680 6.31105 6.38050 6.47585 6.54033 7.08779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.086 4.086 3 C -0.069 4.069 4 C 0.592 3.408 5 O -0.558 6.558 6 N -0.702 5.702 7 C 0.112 3.888 8 H 0.091 0.909 9 C -0.125 4.125 10 C -0.066 4.066 11 H 0.109 0.891 12 C -0.074 4.074 13 C -0.068 4.068 14 C -0.046 4.046 15 C 0.276 3.724 16 N -0.473 5.473 17 C -0.076 4.076 18 C -0.116 4.116 19 C -0.083 4.083 20 C -0.140 4.140 21 N -0.514 5.514 22 C 0.073 3.927 23 C -0.064 4.064 24 O -0.561 6.561 25 Si 0.785 3.215 26 C -0.210 4.210 27 H 0.063 0.937 28 H 0.065 0.935 29 H 0.081 0.919 30 H 0.407 0.593 31 H 0.110 0.890 32 H 0.083 0.917 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.156 0.844 36 H 0.150 0.850 37 H 0.066 0.934 38 H 0.107 0.893 39 H 0.428 0.572 40 H 0.106 0.894 41 H 0.401 0.599 42 H -0.280 1.280 43 H -0.300 1.300 44 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.612 -1.788 -1.064 2.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.095 4.095 3 C -0.182 4.182 4 C 0.381 3.619 5 O -0.437 6.437 6 N -0.353 5.353 7 C 0.007 3.993 8 H 0.109 0.891 9 C -0.163 4.163 10 C -0.084 4.084 11 H 0.127 0.873 12 C -0.075 4.075 13 C -0.089 4.089 14 C -0.050 4.050 15 C -0.038 4.038 16 N -0.149 5.149 17 C -0.096 4.096 18 C -0.134 4.134 19 C -0.101 4.101 20 C -0.178 4.178 21 N -0.111 5.111 22 C -0.046 4.046 23 C -0.173 4.173 24 O -0.372 6.372 25 Si 0.689 3.311 26 C -0.235 4.235 27 H 0.082 0.918 28 H 0.084 0.916 29 H 0.100 0.900 30 H 0.243 0.757 31 H 0.128 0.872 32 H 0.102 0.898 33 H 0.157 0.843 34 H 0.158 0.842 35 H 0.173 0.827 36 H 0.168 0.832 37 H 0.085 0.915 38 H 0.125 0.875 39 H 0.267 0.733 40 H 0.124 0.876 41 H 0.252 0.748 42 H -0.207 1.207 43 H -0.227 1.227 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -0.117 -1.449 -1.067 1.804 hybrid contribution 1.658 0.360 0.819 1.884 sum 1.541 -1.089 -0.248 1.903 Atomic orbital electron populations 1.20340 0.88978 1.03188 1.02166 1.20157 0.96425 0.91164 1.01742 1.20156 0.84299 0.93286 1.20453 1.17104 0.85646 0.83494 0.75700 1.90817 1.17475 1.83647 1.51744 1.45445 1.09435 1.05428 1.74976 1.21938 0.99617 0.79503 0.98217 0.89128 1.23413 0.97265 0.99718 0.95875 1.21641 0.97301 0.92972 0.96526 0.87305 1.19664 0.92554 0.95886 0.99352 1.21194 0.96834 0.94580 0.96262 1.16098 0.85143 0.96114 1.07610 1.26144 0.93000 0.92374 0.92283 1.81295 1.13409 1.09115 1.11117 1.21418 0.92873 0.98603 0.96739 1.21392 0.95691 0.97858 0.98466 1.21604 1.00536 0.92099 0.95871 1.23626 0.96384 1.00925 0.96880 1.41774 1.06926 1.06583 1.55828 1.20112 0.95523 0.82910 1.06023 1.24706 0.92804 1.09907 0.89883 1.86535 1.43212 1.68749 1.38658 0.93436 0.80003 0.70351 0.87358 1.20783 0.90986 0.99558 1.12133 0.91826 0.91606 0.89997 0.75663 0.87172 0.89848 0.84304 0.84219 0.82673 0.83207 0.91489 0.87468 0.73257 0.87577 0.74783 1.20655 1.22701 0.82131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.45 9.82 71.24 0.70 0.25 16 2 C -0.09 -0.48 6.21 -19.57 -0.12 -0.60 16 3 C -0.07 -0.26 7.06 40.35 0.28 0.02 16 4 C 0.59 2.80 7.79 86.45 0.67 3.48 16 5 O -0.56 -6.70 14.43 -4.31 -0.06 -6.77 16 6 N -0.70 2.20 5.26 -444.02 -2.34 -0.14 16 7 C 0.11 -0.49 4.30 45.51 0.20 -0.30 16 8 H 0.09 -0.01 7.50 -2.39 -0.02 -0.03 16 9 C -0.12 1.12 7.29 31.12 0.23 1.34 16 10 C -0.07 0.60 3.87 -10.92 -0.04 0.56 16 11 H 0.11 -1.19 8.09 -2.39 -0.02 -1.21 16 12 C -0.07 0.53 5.28 -19.90 -0.11 0.43 16 13 C -0.07 0.33 9.41 22.54 0.21 0.54 16 14 C -0.05 0.08 5.73 -21.36 -0.12 -0.04 16 15 C 0.28 1.25 15.33 88.34 1.35 2.60 16 16 N -0.47 -5.18 18.53 19.00 0.35 -4.83 16 17 C -0.08 0.36 9.76 22.54 0.22 0.58 16 18 C -0.12 0.90 10.03 22.23 0.22 1.13 16 19 C -0.08 0.69 8.61 22.33 0.19 0.88 16 20 C -0.14 0.93 7.27 31.21 0.23 1.16 16 21 N -0.51 0.76 5.99 -171.93 -1.03 -0.27 16 22 C 0.07 -0.01 6.50 41.34 0.27 0.26 16 23 C -0.06 0.31 3.07 71.23 0.22 0.53 16 24 O -0.56 1.41 12.86 -148.98 -1.92 -0.51 16 25 Si 0.78 -3.76 30.56 68.60 2.10 -1.67 16 26 C -0.21 -0.48 9.27 22.01 0.20 -0.27 16 27 H 0.06 0.35 8.14 -2.38 -0.02 0.33 16 28 H 0.07 0.55 6.50 -2.39 -0.02 0.53 16 29 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 30 H 0.41 -3.56 7.83 -92.70 -0.73 -4.29 16 31 H 0.11 -1.11 7.73 -2.39 -0.02 -1.13 16 32 H 0.08 -0.79 8.14 -2.38 -0.02 -0.81 16 33 H 0.14 -0.97 8.05 -2.91 -0.02 -1.00 16 34 H 0.14 -0.92 8.06 -2.91 -0.02 -0.95 16 35 H 0.16 -1.84 8.06 -2.91 -0.02 -1.86 16 36 H 0.15 -1.79 6.63 -2.91 -0.02 -1.81 16 37 H 0.07 -0.27 8.14 -2.38 -0.02 -0.28 16 38 H 0.11 -0.90 6.30 -2.39 -0.02 -0.91 16 39 H 0.43 -3.21 8.19 -92.71 -0.76 -3.97 16 40 H 0.11 -1.08 7.96 -2.39 -0.02 -1.10 16 41 H 0.40 -4.18 8.74 -74.06 -0.65 -4.83 16 42 H -0.28 0.37 7.11 99.48 0.71 1.08 16 43 H -0.30 -1.09 7.11 99.48 0.71 -0.38 16 44 H 0.16 -0.18 6.19 -2.91 -0.02 -0.20 16 Total: 0.00 -25.29 376.83 0.90 -24.39 By element: Atomic # 1 Polarization: -21.73 SS G_CDS: -1.01 Total: -22.74 kcal Atomic # 6 Polarization: 7.73 SS G_CDS: 4.81 Total: 12.54 kcal Atomic # 7 Polarization: -2.23 SS G_CDS: -3.01 Total: -5.25 kcal Atomic # 8 Polarization: -5.30 SS G_CDS: -1.98 Total: -7.27 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.10 Total: -1.67 kcal Total: -25.29 0.90 -24.39 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_13940406.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.897 kcal (2) G-P(sol) polarization free energy of solvation -25.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.391 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds