Wall clock time and date at job start Sun Mar 7 2021 00:44:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39612 * 120.15206 * 85.83188 * 3 2 1 5 5 C 1.37967 * 119.84751 * 179.97438 * 4 3 2 6 6 C 1.38335 * 120.15287 * 0.02562 * 5 4 3 7 7 C 1.38388 * 120.30468 * 359.97438 * 6 5 4 8 8 C 1.50700 * 119.92255 * 179.97438 * 7 6 5 9 9 H 1.09002 * 112.84909 * 191.19599 * 8 7 6 10 10 C 1.53783 * 113.69114 * 322.46059 * 8 7 6 11 11 C 1.53780 * 87.07812 * 139.99586 * 10 8 7 12 12 H 1.09004 * 113.69001 * 220.00428 * 11 10 8 13 13 N 1.46501 * 113.61524 * 89.12072 * 11 10 8 14 14 C 1.34771 * 120.00458 * 107.49963 * 13 11 10 15 15 O 1.21283 * 120.00108 * 359.97438 * 14 13 11 16 16 C 1.50696 * 120.00166 * 179.97438 * 14 13 11 17 17 C 1.50709 * 109.47071 * 179.97438 * 16 14 13 18 18 C 1.34843 * 125.88988 * 84.97789 * 17 16 14 19 19 C 1.40890 * 107.41713 * 180.02562 * 18 17 16 20 20 C 1.34842 * 107.41687 * 0.02562 * 19 18 17 21 21 C 1.50706 * 125.89233 * 179.97438 * 20 19 18 22 22 O 1.42895 * 109.47147 * 245.02719 * 21 20 19 23 23 Si 1.86299 * 109.46748 * 5.02361 * 21 20 19 24 24 N 1.36338 * 125.88964 * 265.30543 * 17 16 14 25 25 C 1.53774 * 87.08415 * 334.56616 * 11 10 8 26 26 C 1.37923 * 120.15087 * 0.25552 * 7 6 5 27 27 H 1.08007 * 120.07596 * 359.96924 * 4 3 2 28 28 H 1.08001 * 119.92263 * 179.97438 * 5 4 3 29 29 H 1.08000 * 119.84739 * 179.97438 * 6 5 4 30 30 H 1.08998 * 113.61343 * 25.44670 * 10 8 7 31 31 H 1.09003 * 113.61173 * 254.54013 * 10 8 7 32 32 H 0.96999 * 119.99595 * 287.49722 * 13 11 10 33 33 H 1.09006 * 109.46893 * 60.00409 * 16 14 13 34 34 H 1.08999 * 109.47273 * 299.99730 * 16 14 13 35 35 H 1.08003 * 126.29190 * 0.02562 * 18 17 16 36 36 H 1.08004 * 126.29059 * 179.97438 * 19 18 17 37 37 H 1.09000 * 109.47318 * 125.01831 * 21 20 19 38 38 H 0.96700 * 113.99916 * 179.97438 * 22 21 20 39 39 H 1.48501 * 109.99913 * 178.67998 * 23 21 20 40 40 H 1.48502 * 110.00097 * 300.00038 * 23 21 20 41 41 H 0.97004 * 125.64061 * 359.97438 * 24 17 16 42 42 H 1.09007 * 113.61592 * 139.97970 * 25 11 10 43 43 H 1.08998 * 113.61649 * 270.80276 * 25 11 10 44 44 H 1.08002 * 120.07761 * 179.72208 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 -0.0868 -1.2040 5 6 4.6489 -0.0851 -1.1968 6 6 5.3374 0.0024 -0.0001 7 6 4.6486 0.0893 1.1971 8 6 5.4073 0.1837 2.4957 9 1 4.7690 0.0516 3.3694 10 6 6.6832 -0.6740 2.5297 11 6 7.3564 0.4970 3.2648 12 1 8.3825 0.6818 2.9470 13 7 7.2148 0.4345 4.7217 14 6 8.2767 0.1190 5.4891 15 8 9.3497 -0.1137 4.9737 16 6 8.1311 0.0553 6.9877 17 6 9.4546 -0.3159 7.6057 18 6 10.4510 0.5390 7.9131 19 6 11.5012 -0.2192 8.4674 20 6 11.1068 -1.5086 8.4769 21 6 11.9144 -2.6759 8.9833 22 8 12.2198 -3.5513 7.8960 23 14 13.4975 -2.0529 9.7424 24 7 9.8533 -1.5749 7.9445 25 6 6.3262 1.4137 2.5844 26 6 3.2694 0.0840 1.2047 27 1 2.7330 -0.1557 -2.1390 28 1 5.1927 -0.1531 -2.1274 29 1 6.4174 0.0029 -0.0001 30 1 7.1039 -0.8701 1.5434 31 1 6.5882 -1.5741 3.1371 32 1 6.3566 0.6202 5.1339 33 1 7.3853 -0.6956 7.2486 34 1 7.8144 1.0282 7.3636 35 1 10.4451 1.6084 7.7622 36 1 12.4485 0.1622 8.8191 37 1 11.3394 -3.2168 9.7349 38 1 12.7395 -4.3264 8.1492 39 1 14.2884 -3.1917 10.2742 40 1 14.2907 -1.3135 8.7279 41 1 9.3308 -2.3838 7.8281 42 1 5.9428 2.1990 3.2360 43 1 6.6498 1.7895 1.6138 44 1 2.7331 0.1473 2.1400 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_14644196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:44:48 Heat of formation + Delta-G solvation = 62.989898 kcal Electronic energy + Delta-G solvation = -26900.319297 eV Core-core repulsion = 22978.875789 eV Total energy + Delta-G solvation = -3921.443508 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.142 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.25993 -41.66333 -40.41248 -39.04835 -37.76685 -37.32320 -34.63193 -33.19540 -32.41877 -31.98629 -31.81259 -29.45951 -26.89834 -26.45965 -25.21674 -24.76507 -23.03732 -22.20361 -21.21751 -20.95373 -20.79448 -19.15177 -18.56315 -18.27662 -18.01409 -17.48604 -17.11128 -16.63875 -16.37622 -15.98796 -15.89091 -15.42170 -15.14900 -15.03075 -14.98170 -14.63819 -14.47892 -14.34888 -14.17274 -14.06681 -13.89772 -13.73113 -13.70392 -13.57064 -13.27602 -13.09151 -12.96113 -12.85024 -12.69404 -12.40991 -11.99503 -11.85708 -11.81062 -11.40571 -10.88959 -10.57559 -10.14103 -10.08888 -9.85376 -9.66336 -8.85352 -4.88473 -0.32714 0.15067 1.12147 1.33059 1.61397 1.65400 1.67549 1.88797 1.90154 2.04584 2.27392 2.51990 2.74659 2.81102 3.28095 3.36925 3.48855 3.53833 3.63475 3.67939 3.77183 3.90621 3.93556 3.95089 3.96666 4.03004 4.08483 4.26266 4.30024 4.36041 4.50689 4.54873 4.58884 4.64095 4.71894 4.77170 4.82163 4.86106 4.88240 4.98487 5.15209 5.19789 5.34734 5.36163 5.42334 5.51669 5.66096 6.11357 6.24527 6.39271 6.41875 6.48419 6.70353 7.21197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.074 4.074 9 H 0.100 0.900 10 C -0.144 4.144 11 C 0.120 3.880 12 H 0.106 0.894 13 N -0.717 5.717 14 C 0.513 3.487 15 O -0.518 6.518 16 C -0.071 4.071 17 C 0.035 3.965 18 C -0.171 4.171 19 C -0.183 4.183 20 C 0.036 3.964 21 C -0.056 4.056 22 O -0.541 6.541 23 Si 0.711 3.289 24 N -0.536 5.536 25 C -0.135 4.135 26 C -0.067 4.067 27 H 0.133 0.867 28 H 0.135 0.865 29 H 0.132 0.868 30 H 0.096 0.904 31 H 0.075 0.925 32 H 0.401 0.599 33 H 0.100 0.900 34 H 0.119 0.881 35 H 0.138 0.862 36 H 0.142 0.858 37 H 0.071 0.929 38 H 0.380 0.620 39 H -0.262 1.262 40 H -0.252 1.252 41 H 0.412 0.588 42 H 0.079 0.921 43 H 0.100 0.900 44 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.525 0.779 3.445 3.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.065 4.065 3 C -0.029 4.029 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.072 4.072 8 C -0.093 4.093 9 H 0.118 0.882 10 C -0.183 4.183 11 C 0.014 3.986 12 H 0.124 0.876 13 N -0.369 5.369 14 C 0.298 3.702 15 O -0.392 6.392 16 C -0.112 4.112 17 C -0.078 4.078 18 C -0.196 4.196 19 C -0.208 4.208 20 C -0.077 4.077 21 C -0.165 4.165 22 O -0.348 6.348 23 Si 0.610 3.390 24 N -0.131 5.131 25 C -0.173 4.173 26 C -0.088 4.088 27 H 0.151 0.849 28 H 0.153 0.847 29 H 0.150 0.850 30 H 0.114 0.886 31 H 0.093 0.907 32 H 0.236 0.764 33 H 0.118 0.882 34 H 0.137 0.863 35 H 0.155 0.845 36 H 0.159 0.841 37 H 0.089 0.911 38 H 0.228 0.772 39 H -0.187 1.187 40 H -0.176 1.176 41 H 0.248 0.752 42 H 0.097 0.903 43 H 0.118 0.882 44 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 0.015 0.906 2.703 2.850 hybrid contribution -0.418 -1.488 -0.567 1.646 sum -0.403 -0.582 2.136 2.250 Atomic orbital electron populations 1.81312 1.12061 1.08404 1.06926 1.25741 0.92698 0.94005 0.94104 1.15986 0.84300 1.07519 0.95054 1.21244 0.94521 0.96898 0.96758 1.21134 0.93582 0.99883 0.98707 1.21312 1.00676 0.96859 0.91706 1.19598 0.92729 0.99871 0.95012 1.21629 0.95087 0.97627 0.94930 0.88150 1.23582 0.95053 0.97898 1.01747 1.21829 1.00701 0.96319 0.79757 0.87616 1.45678 1.12974 1.72081 1.06210 1.20640 0.83937 0.76424 0.89148 1.90792 1.26583 1.46998 1.74820 1.20127 0.94605 1.05064 0.91368 1.19439 0.97144 0.84456 1.06795 1.20567 0.93566 0.99108 1.06365 1.20615 1.00560 0.91806 1.07845 1.19551 0.86534 0.94699 1.06884 1.24498 1.07703 0.91828 0.92438 1.86628 1.75689 1.38003 1.34494 0.94486 0.74792 0.84015 0.85685 1.41756 1.14401 1.08048 1.48874 1.23436 0.95529 0.96336 1.02013 1.21075 0.93641 0.97298 0.96766 0.84899 0.84671 0.85018 0.88557 0.90670 0.76430 0.88198 0.86341 0.84451 0.84080 0.91097 0.77190 1.18733 1.17608 0.75223 0.90255 0.88204 0.85034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.97 18.54 41.84 0.78 -1.19 16 2 C 0.25 0.47 15.33 -22.48 -0.34 0.12 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.24 16 5 C -0.12 0.33 10.03 -39.65 -0.40 -0.07 16 6 C -0.09 0.26 8.61 -39.49 -0.34 -0.08 16 7 C -0.07 0.20 5.28 -104.68 -0.55 -0.35 16 8 C -0.07 0.29 3.85 -90.96 -0.35 -0.06 16 9 H 0.10 -0.48 8.09 -51.93 -0.42 -0.90 16 10 C -0.14 0.40 7.25 -25.92 -0.19 0.22 16 11 C 0.12 -0.26 4.32 -67.12 -0.29 -0.55 16 12 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 13 N -0.72 1.91 5.26 -53.02 -0.28 1.63 16 14 C 0.51 0.19 7.82 -10.99 -0.09 0.10 16 15 O -0.52 -2.90 15.63 5.56 0.09 -2.81 16 16 C -0.07 0.15 6.24 -29.03 -0.18 -0.03 16 17 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 18 C -0.17 -0.44 10.76 -39.78 -0.43 -0.87 16 19 C -0.18 -0.51 9.37 -39.78 -0.37 -0.88 16 20 C 0.04 0.09 6.53 -81.79 -0.53 -0.44 16 21 C -0.06 -0.04 3.07 36.01 0.11 0.08 16 22 O -0.54 -1.13 12.86 -35.23 -0.45 -1.59 16 23 Si 0.71 -0.26 30.60 -169.99 -5.20 -5.46 16 24 N -0.54 -0.90 6.07 -5.44 -0.03 -0.93 16 25 C -0.14 0.53 7.29 -25.92 -0.19 0.34 16 26 C -0.07 0.13 9.41 -39.17 -0.37 -0.24 16 27 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 28 H 0.14 -0.62 8.06 -52.49 -0.42 -1.05 16 29 H 0.13 -0.58 6.65 -52.49 -0.35 -0.93 16 30 H 0.10 -0.30 6.31 -51.93 -0.33 -0.63 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 32 H 0.40 -2.23 8.70 -40.82 -0.36 -2.59 16 33 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 34 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 35 H 0.14 0.15 8.06 -52.48 -0.42 -0.27 16 36 H 0.14 0.16 6.24 -52.48 -0.33 -0.16 16 37 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 38 H 0.38 -0.83 8.74 45.56 0.40 -0.43 16 39 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 40 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 41 H 0.41 -0.09 8.96 -40.82 -0.37 -0.46 16 42 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 43 H 0.10 -0.40 7.73 -51.93 -0.40 -0.80 16 44 H 0.13 -0.42 8.05 -52.49 -0.42 -0.84 16 LS Contribution 381.15 15.07 5.74 5.74 Total: 0.00 -11.95 381.15 -10.86 -22.81 By element: Atomic # 1 Polarization: -8.73 SS G_CDS: -5.53 Total: -14.25 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -5.97 Total: -3.95 kcal Atomic # 7 Polarization: -0.96 SS G_CDS: 0.46 Total: -0.49 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.37 Total: -4.39 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.20 Total: -5.46 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -11.95 -10.86 -22.81 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_14644196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.802 kcal (2) G-P(sol) polarization free energy of solvation -11.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.860 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.812 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds