Wall clock time and date at job start Sun Mar 7 2021 00:44:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39608 * 120.15477 * 2.78241 * 3 2 1 5 5 C 1.37968 * 119.84901 * 179.97438 * 4 3 2 6 6 C 1.38341 * 120.14786 * 359.97438 * 5 4 3 7 7 C 1.38384 * 120.30518 * 359.97438 * 6 5 4 8 8 C 1.50703 * 119.91989 * 179.97438 * 7 6 5 9 9 H 1.09003 * 112.84376 * 168.80353 * 8 7 6 10 10 C 1.53779 * 113.61746 * 299.99941 * 8 7 6 11 11 C 1.53789 * 87.08024 * 140.06681 * 10 8 7 12 12 H 1.08994 * 113.61359 * 219.93397 * 11 10 8 13 13 N 1.46501 * 113.61246 * 89.11640 * 11 10 8 14 14 C 1.34774 * 119.99594 * 154.99939 * 13 11 10 15 15 O 1.21279 * 120.00476 * 0.02562 * 14 13 11 16 16 C 1.50705 * 119.99676 * 180.02562 * 14 13 11 17 17 C 1.53546 * 109.82427 * 80.00077 * 16 14 13 18 18 C 1.53032 * 108.56341 * 180.48764 * 17 16 14 19 19 C 1.50208 * 110.18023 * 310.51166 * 18 17 16 20 20 C 1.50693 * 118.54770 * 199.94294 * 19 18 17 21 21 O 1.42898 * 109.47235 * 70.00389 * 20 19 18 22 22 Si 1.86305 * 109.46954 * 190.00173 * 20 19 18 23 23 C 1.30767 * 123.15991 * 19.96997 * 19 18 17 24 24 N 1.38931 * 121.74983 * 359.66104 * 23 19 18 25 25 C 1.53778 * 113.69269 * 37.54084 * 8 7 6 26 26 C 1.37921 * 120.15233 * 0.25646 * 7 6 5 27 27 H 1.08004 * 120.07386 * 0.02562 * 4 3 2 28 28 H 1.07997 * 119.92652 * 179.97438 * 5 4 3 29 29 H 1.08001 * 119.84733 * 180.02562 * 6 5 4 30 30 H 1.08997 * 113.61123 * 25.51920 * 10 8 7 31 31 H 1.09003 * 113.69378 * 254.62449 * 10 8 7 32 32 H 0.97001 * 119.99860 * 335.00300 * 13 11 10 33 33 H 1.09002 * 109.81493 * 319.13619 * 16 14 13 34 34 H 1.09001 * 109.61905 * 60.76131 * 17 16 14 35 35 H 1.09003 * 109.61797 * 300.21244 * 17 16 14 36 36 H 1.09002 * 109.32995 * 70.68866 * 18 17 16 37 37 H 1.08996 * 109.33232 * 190.34132 * 18 17 16 38 38 H 1.08996 * 109.47512 * 310.00284 * 20 19 18 39 39 H 0.96699 * 114.00039 * 59.99281 * 21 20 19 40 40 H 1.48498 * 109.99776 * 180.02562 * 22 20 19 41 41 H 1.48496 * 109.99894 * 301.31923 * 22 20 19 42 42 H 1.07996 * 119.17862 * 179.63029 * 23 19 18 43 43 H 0.97001 * 120.55852 * 193.29416 * 24 23 19 44 44 H 1.09000 * 113.61722 * 105.45643 * 25 8 7 45 45 H 1.09000 * 113.61486 * 334.55040 * 25 8 7 46 46 H 1.08006 * 120.07719 * 179.74361 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 -1.2048 -0.0586 5 6 4.6495 -1.1968 -0.0588 6 6 5.3374 0.0021 -0.0016 7 6 4.6480 1.2007 0.0556 8 6 5.4061 2.5016 0.1182 9 1 4.7674 3.3714 -0.0356 10 6 6.3244 2.6211 1.3459 11 6 7.3548 3.2792 0.4130 12 1 8.3809 2.9664 0.6060 13 7 7.2125 4.7339 0.3147 14 6 8.2743 5.4938 -0.0193 15 8 9.3475 4.9733 -0.2388 16 6 8.1280 6.9904 -0.1199 17 6 8.1775 7.6139 1.2824 18 6 8.0144 9.1295 1.1477 19 6 8.9584 9.6619 0.1076 20 6 9.2971 11.1301 0.1265 21 8 10.1097 11.4169 1.2664 22 14 10.2269 11.5729 -1.4261 23 6 9.5016 8.9123 -0.8160 24 7 9.2445 7.5493 -0.8961 25 6 6.6823 2.5151 -0.7397 26 6 3.2688 1.2070 0.0613 27 1 2.7340 -2.1414 -0.1045 28 1 5.1937 -2.1285 -0.1037 29 1 6.4174 0.0028 -0.0024 30 1 6.6478 1.6595 1.7444 31 1 5.9417 3.2912 2.1157 32 1 6.3540 5.1502 0.4899 33 1 7.1817 7.2376 -0.6011 34 1 9.1364 7.3889 1.7493 35 1 7.3677 7.2111 1.8908 36 1 6.9894 9.3575 0.8552 37 1 8.2297 9.6022 2.1059 38 1 8.3785 11.7143 0.1790 39 1 10.9455 10.9309 1.2860 40 1 10.5673 13.0183 -1.4193 41 1 11.4657 10.7602 -1.5254 42 1 10.1675 9.3639 -1.5363 43 1 9.7925 6.9761 -1.4548 44 1 6.5873 3.1001 -1.6545 45 1 7.1035 1.5245 -0.9113 46 1 2.7320 2.1430 0.1101 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:44:50 Heat of formation + Delta-G solvation = 39.924186 kcal Electronic energy + Delta-G solvation = -27913.511592 eV Core-core repulsion = 23963.756402 eV Total energy + Delta-G solvation = -3949.755191 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.74681 -40.88266 -39.75721 -38.87865 -37.51350 -37.36838 -34.72126 -33.17675 -32.98864 -32.22317 -31.76748 -27.73074 -26.62328 -26.07388 -25.36802 -24.80272 -23.66441 -22.78111 -21.91329 -20.72464 -19.43007 -19.03017 -18.94689 -18.07219 -17.29576 -17.21381 -16.76611 -16.60761 -16.25912 -16.12310 -15.84781 -15.52419 -15.27680 -15.19376 -15.16641 -14.91695 -14.58326 -14.33792 -14.18832 -14.11247 -13.93159 -13.84322 -13.75093 -13.37349 -13.13520 -12.96085 -12.87684 -12.77179 -12.47272 -12.31349 -11.92786 -11.74215 -11.64822 -11.64274 -11.21830 -11.18010 -10.87139 -10.30579 -10.08679 -9.89524 -9.64282 -8.44582 -4.89925 -0.17687 0.39226 1.36854 1.41206 1.49693 1.57575 1.58677 1.91425 1.92613 2.00711 2.66896 2.84017 2.87255 3.52688 3.54106 3.63065 3.73175 3.77816 3.81619 3.89575 3.96051 4.03907 4.10501 4.20631 4.22021 4.34630 4.35565 4.49656 4.53702 4.63598 4.68392 4.72963 4.80040 4.84017 4.86757 4.93200 5.03604 5.08010 5.08595 5.11880 5.22699 5.24837 5.32874 5.36685 5.43987 5.53767 5.61458 5.70826 5.91340 6.27413 6.40955 6.49998 6.62358 6.84041 7.15752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.276 3.724 3 C -0.046 4.046 4 C -0.077 4.077 5 C -0.118 4.118 6 C -0.084 4.084 7 C -0.074 4.074 8 C -0.066 4.066 9 H 0.114 0.886 10 C -0.126 4.126 11 C 0.112 3.888 12 H 0.084 0.916 13 N -0.693 5.693 14 C 0.516 3.484 15 O -0.575 6.575 16 C 0.138 3.862 17 C -0.121 4.121 18 C -0.054 4.054 19 C -0.280 4.280 20 C -0.057 4.057 21 O -0.558 6.558 22 Si 0.747 3.253 23 C 0.137 3.863 24 N -0.737 5.737 25 C -0.141 4.141 26 C -0.067 4.067 27 H 0.138 0.862 28 H 0.154 0.846 29 H 0.149 0.851 30 H 0.104 0.896 31 H 0.088 0.912 32 H 0.419 0.581 33 H 0.118 0.882 34 H 0.051 0.949 35 H 0.102 0.898 36 H 0.084 0.916 37 H 0.065 0.935 38 H 0.114 0.886 39 H 0.381 0.619 40 H -0.313 1.313 41 H -0.290 1.290 42 H 0.140 0.860 43 H 0.406 0.594 44 H 0.069 0.931 45 H 0.102 0.898 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.324 -2.139 -0.960 2.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.150 5.150 2 C -0.038 4.038 3 C -0.050 4.050 4 C -0.098 4.098 5 C -0.136 4.136 6 C -0.102 4.102 7 C -0.074 4.074 8 C -0.084 4.084 9 H 0.132 0.868 10 C -0.164 4.164 11 C 0.006 3.994 12 H 0.103 0.897 13 N -0.345 5.345 14 C 0.302 3.698 15 O -0.453 6.453 16 C 0.029 3.971 17 C -0.160 4.160 18 C -0.091 4.091 19 C -0.290 4.290 20 C -0.168 4.168 21 O -0.365 6.365 22 Si 0.655 3.345 23 C 0.016 3.984 24 N -0.370 5.370 25 C -0.179 4.179 26 C -0.087 4.087 27 H 0.156 0.844 28 H 0.171 0.829 29 H 0.166 0.834 30 H 0.123 0.877 31 H 0.106 0.894 32 H 0.256 0.744 33 H 0.136 0.864 34 H 0.070 0.930 35 H 0.120 0.880 36 H 0.102 0.898 37 H 0.084 0.916 38 H 0.132 0.868 39 H 0.229 0.771 40 H -0.242 1.242 41 H -0.218 1.218 42 H 0.157 0.843 43 H 0.243 0.757 44 H 0.088 0.912 45 H 0.120 0.880 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.582 -1.856 -1.241 2.307 hybrid contribution 1.034 -0.314 0.751 1.316 sum 0.452 -2.170 -0.490 2.270 Atomic orbital electron populations 1.81321 1.13821 1.08894 1.10974 1.26176 0.93104 0.92326 0.92195 1.16109 0.82850 0.96209 1.09800 1.21404 0.95177 0.96618 0.96553 1.21375 0.93125 0.99713 0.99348 1.21592 1.01605 0.91496 0.95520 1.19701 0.92358 0.95625 0.99751 1.21619 0.94745 0.94929 0.97111 0.86759 1.23408 0.94488 1.02220 0.96234 1.21892 1.00142 0.79470 0.97862 0.89737 1.45505 1.12939 1.06585 1.69500 1.20856 0.83793 0.89593 0.75544 1.90726 1.28522 1.75220 1.50863 1.21137 0.92794 0.88422 0.94710 1.21832 1.03125 0.96697 0.94307 1.19983 0.98592 0.93107 0.97447 1.20830 1.10492 0.95910 1.01757 1.24855 0.99407 0.95423 0.97089 1.86540 1.34991 1.69959 1.45030 0.94557 0.81962 0.75621 0.82334 1.20506 0.97779 0.83857 0.96240 1.44396 1.35239 1.05852 1.51473 1.23566 0.95326 1.01608 0.97424 1.21220 0.94131 0.96677 0.96696 0.84364 0.82871 0.83369 0.87735 0.89381 0.74351 0.86439 0.93035 0.88001 0.89771 0.91604 0.86770 0.77069 1.24202 1.21766 0.84325 0.75749 0.91234 0.88012 0.84049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -4.95 18.54 19.00 0.35 -4.60 16 2 C 0.28 1.08 15.33 88.33 1.35 2.43 16 3 C -0.05 0.12 5.73 -21.36 -0.12 -0.01 16 4 C -0.08 0.40 9.76 22.54 0.22 0.62 16 5 C -0.12 0.98 10.03 22.23 0.22 1.20 16 6 C -0.08 0.77 8.61 22.33 0.19 0.96 16 7 C -0.07 0.63 5.28 -19.90 -0.11 0.53 16 8 C -0.07 0.74 3.85 -11.01 -0.04 0.70 16 9 H 0.11 -1.55 8.09 -2.39 -0.02 -1.57 16 10 C -0.13 1.42 7.29 31.12 0.23 1.64 16 11 C 0.11 -0.83 4.32 45.52 0.20 -0.63 16 12 H 0.08 -0.19 7.46 -2.39 -0.02 -0.21 16 13 N -0.69 5.74 5.26 -440.03 -2.32 3.42 16 14 C 0.52 -1.00 7.10 87.66 0.62 -0.37 16 15 O -0.57 -4.20 15.66 -3.03 -0.05 -4.25 16 16 C 0.14 -0.68 3.36 44.33 0.15 -0.53 16 17 C -0.12 0.56 5.47 30.79 0.17 0.73 16 18 C -0.05 0.17 5.86 29.70 0.17 0.35 16 19 C -0.28 0.42 5.36 -16.41 -0.09 0.33 16 20 C -0.06 0.01 2.81 71.23 0.20 0.21 16 21 O -0.56 -2.26 12.88 -148.98 -1.92 -4.18 16 22 Si 0.75 -0.63 29.94 68.60 2.05 1.42 16 23 C 0.14 -0.25 9.60 83.77 0.80 0.55 16 24 N -0.74 1.19 5.47 -329.25 -1.80 -0.61 16 25 C -0.14 1.26 7.25 31.12 0.23 1.49 16 26 C -0.07 0.40 9.41 22.54 0.21 0.61 16 27 H 0.14 -0.96 8.06 -2.91 -0.02 -0.98 16 28 H 0.15 -1.86 8.06 -2.91 -0.02 -1.88 16 29 H 0.15 -1.88 6.65 -2.91 -0.02 -1.90 16 30 H 0.10 -1.21 7.72 -2.39 -0.02 -1.23 16 31 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 32 H 0.42 -6.00 8.70 -92.71 -0.81 -6.81 16 33 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 34 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 35 H 0.10 -0.96 8.14 -2.39 -0.02 -0.98 16 36 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 37 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.11 -0.17 7.96 -2.39 -0.02 -0.19 16 39 H 0.38 -0.31 8.70 -74.06 -0.64 -0.95 16 40 H -0.31 -2.48 7.11 99.48 0.71 -1.77 16 41 H -0.29 -0.91 6.83 99.48 0.68 -0.23 16 42 H 0.14 -0.50 4.26 -2.91 -0.01 -0.51 16 43 H 0.41 -0.14 8.08 -92.71 -0.75 -0.89 16 44 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 45 H 0.10 -1.00 6.31 -2.39 -0.02 -1.01 16 46 H 0.14 -1.19 8.05 -2.91 -0.02 -1.22 16 Total: 0.00 -23.45 383.22 -0.21 -23.65 By element: Atomic # 1 Polarization: -24.54 SS G_CDS: -1.14 Total: -25.68 kcal Atomic # 6 Polarization: 6.20 SS G_CDS: 4.61 Total: 10.82 kcal Atomic # 7 Polarization: 1.98 SS G_CDS: -3.76 Total: -1.79 kcal Atomic # 8 Polarization: -6.46 SS G_CDS: -1.97 Total: -8.43 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: 2.05 Total: 1.42 kcal Total: -23.45 -0.21 -23.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.578 kcal (2) G-P(sol) polarization free energy of solvation -23.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.654 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds