Wall clock time and date at job start Sun Mar 7 2021 00:45:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39617 * 120.15009 * 309.13871 * 3 2 1 5 5 C 1.37976 * 119.84317 * 180.30028 * 4 3 2 6 6 C 1.38336 * 120.15081 * 359.95165 * 5 4 3 7 7 C 1.38387 * 120.30636 * 0.05162 * 6 5 4 8 8 C 1.50699 * 119.92264 * 179.97438 * 7 6 5 9 9 H 1.08996 * 112.85138 * 168.82220 * 8 7 6 10 10 C 1.53783 * 113.61717 * 300.02039 * 8 7 6 11 11 C 1.53781 * 87.08310 * 139.97948 * 10 8 7 12 12 H 1.08997 * 113.61093 * 220.01598 * 11 10 8 13 13 N 1.46504 * 113.61075 * 89.20419 * 11 10 8 14 14 C 1.34768 * 119.99942 * 155.00053 * 13 11 10 15 15 O 1.21285 * 120.00213 * 359.97438 * 14 13 11 16 16 C 1.50702 * 120.00344 * 179.97438 * 14 13 11 17 17 O 1.42895 * 109.47366 * 180.02562 * 16 14 13 18 18 C 1.35908 * 116.99835 * 180.02562 * 17 16 14 19 19 C 1.38727 * 120.05471 * 359.72022 * 18 17 16 20 20 C 1.38147 * 119.94340 * 179.70019 * 19 18 17 21 21 C 1.38270 * 120.05251 * 0.59812 * 20 19 18 22 22 C 1.50695 * 119.94278 * 179.70053 * 21 20 19 23 23 O 1.42901 * 109.46947 * 244.97827 * 22 21 20 24 24 Si 1.86302 * 109.47278 * 4.97772 * 22 21 20 25 25 C 1.38268 * 120.11222 * 359.67954 * 21 20 19 26 26 C 1.38140 * 120.05532 * 0.02562 * 25 21 20 27 27 C 1.53780 * 87.08109 * 334.56768 * 11 10 8 28 28 C 1.37917 * 120.15347 * 359.97223 * 7 6 5 29 29 H 1.07994 * 120.07988 * 0.29788 * 4 3 2 30 30 H 1.07996 * 119.91738 * 179.97438 * 5 4 3 31 31 H 1.08000 * 119.84651 * 180.02562 * 6 5 4 32 32 H 1.09000 * 113.61623 * 254.53394 * 10 8 7 33 33 H 1.09001 * 113.61147 * 25.34894 * 10 8 7 34 34 H 0.97002 * 119.99678 * 334.99152 * 13 11 10 35 35 H 1.09011 * 109.46898 * 299.99891 * 16 14 13 36 36 H 1.08996 * 109.46938 * 59.99206 * 16 14 13 37 37 H 1.08002 * 120.02785 * 359.97438 * 19 18 17 38 38 H 1.08000 * 119.97510 * 180.27895 * 20 19 18 39 39 H 1.08999 * 109.47590 * 124.98142 * 22 21 20 40 40 H 0.96708 * 113.99992 * 180.02562 * 23 22 21 41 41 H 1.48502 * 109.99921 * 300.00091 * 24 22 21 42 42 H 1.48499 * 109.99912 * 61.32245 * 24 22 21 43 43 H 1.08000 * 119.97052 * 179.97438 * 25 21 20 44 44 H 1.07999 * 120.02864 * 179.97438 * 26 25 21 45 45 H 1.08999 * 113.61808 * 270.88186 * 27 11 10 46 46 H 1.09001 * 113.61293 * 139.97732 * 27 11 10 47 47 H 1.07998 * 120.07857 * 180.02562 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2695 -0.7611 0.9364 5 6 4.6493 -0.7509 0.9346 6 6 5.3373 0.0108 0.0073 7 6 4.6482 0.7682 -0.9236 8 6 5.4065 1.5953 -1.9295 9 1 4.7688 1.9879 -2.7216 10 6 6.3202 2.6554 -1.2921 11 6 7.3553 2.2992 -2.3722 12 1 8.3800 2.2692 -2.0019 13 7 7.2168 3.0865 -3.5999 14 6 8.2815 3.2721 -4.4050 15 8 9.3545 2.7878 -4.1130 16 6 8.1391 4.0814 -5.6683 17 8 9.3965 4.1332 -6.3452 18 6 9.4413 4.8303 -7.5110 19 6 8.2972 5.4468 -7.9963 20 6 8.3468 6.1600 -9.1784 21 6 9.5326 6.2493 -9.8840 22 6 9.5823 7.0223 -11.1766 23 8 9.8605 6.1280 -12.2560 24 14 7.9406 7.8539 -11.4665 25 6 10.6729 5.6310 -9.4053 26 6 10.6299 4.9217 -8.2206 27 6 6.6862 0.9166 -2.4459 28 6 3.2691 0.7678 -0.9329 29 1 2.7336 -1.3568 1.6604 30 1 5.1932 -1.3394 1.6587 31 1 6.4173 0.0148 0.0101 32 1 5.9344 3.6714 -1.3751 33 1 6.6393 2.4053 -0.2803 34 1 6.3588 3.4740 -3.8333 35 1 7.3968 3.6155 -6.3165 36 1 7.8189 5.0927 -5.4176 37 1 7.3696 5.3729 -7.4482 38 1 7.4575 6.6439 -9.5544 39 1 10.3667 7.7770 -11.1188 40 1 9.9075 6.5581 -13.1209 41 1 6.8627 6.8356 -11.5474 42 1 7.6545 8.8102 -10.3670 43 1 11.5978 5.7019 -9.9585 44 1 11.5208 4.4386 -7.8473 45 1 7.1065 0.1904 -1.7502 46 1 6.5957 0.5289 -3.4606 47 1 2.7325 1.3590 -1.6602 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_2989410.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:45:06 Heat of formation + Delta-G solvation = 16.222041 kcal Electronic energy + Delta-G solvation = -29802.634669 eV Core-core repulsion = 25497.680733 eV Total energy + Delta-G solvation = -4304.953936 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.91284 -41.38507 -40.49814 -39.38995 -38.68774 -37.35539 -37.19467 -34.79995 -32.59632 -32.44157 -32.16906 -31.85581 -29.69815 -26.96233 -26.51136 -26.07577 -25.02107 -24.11874 -23.06926 -22.45683 -21.83504 -20.92009 -19.61210 -19.13913 -18.49303 -18.33548 -17.60045 -17.48167 -17.40195 -17.01889 -16.75216 -16.61066 -16.12136 -15.72798 -15.68407 -15.51584 -15.25832 -15.12801 -15.00976 -14.66016 -14.47259 -14.22254 -14.17249 -14.08311 -13.86425 -13.76647 -13.72575 -13.59980 -13.43441 -13.10715 -13.02574 -12.73278 -12.49237 -12.21114 -12.04381 -11.95788 -11.93008 -11.88006 -11.47675 -10.99850 -10.33782 -10.29612 -10.11632 -10.08430 -9.88749 -9.25330 -5.01421 -0.34966 0.12508 0.23530 0.25795 1.24787 1.32322 1.37414 1.59207 1.65896 1.86722 1.91839 2.44206 2.58615 2.72311 2.79031 3.20331 3.32592 3.40734 3.43390 3.48796 3.61677 3.64413 3.71663 3.73800 3.77999 3.82732 3.87805 3.91442 3.91715 4.05571 4.19401 4.26769 4.32639 4.42046 4.43878 4.49837 4.54219 4.59510 4.63335 4.71621 4.78167 4.80957 4.88702 4.89555 5.10752 5.12811 5.16870 5.18988 5.27650 5.41140 5.46738 5.62349 5.63617 6.13806 6.28363 6.46734 6.60622 6.98672 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.073 4.073 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.073 4.073 8 C -0.075 4.075 9 H 0.101 0.899 10 C -0.135 4.135 11 C 0.120 3.880 12 H 0.109 0.891 13 N -0.711 5.711 14 C 0.520 3.480 15 O -0.508 6.508 16 C 0.039 3.961 17 O -0.287 6.287 18 C 0.134 3.866 19 C -0.205 4.205 20 C -0.082 4.082 21 C -0.112 4.112 22 C -0.067 4.067 23 O -0.546 6.546 24 Si 0.681 3.319 25 C -0.048 4.048 26 C -0.143 4.143 27 C -0.144 4.144 28 C -0.067 4.067 29 H 0.133 0.867 30 H 0.136 0.864 31 H 0.132 0.868 32 H 0.079 0.921 33 H 0.102 0.898 34 H 0.403 0.597 35 H 0.095 0.905 36 H 0.095 0.905 37 H 0.131 0.869 38 H 0.121 0.879 39 H 0.074 0.926 40 H 0.382 0.618 41 H -0.252 1.252 42 H -0.256 1.256 43 H 0.137 0.863 44 H 0.139 0.861 45 H 0.099 0.901 46 H 0.077 0.923 47 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.268 3.642 -1.572 4.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.073 4.073 8 C -0.094 4.094 9 H 0.119 0.881 10 C -0.173 4.173 11 C 0.015 3.985 12 H 0.127 0.873 13 N -0.365 5.365 14 C 0.304 3.696 15 O -0.381 6.381 16 C -0.040 4.040 17 O -0.199 6.199 18 C 0.089 3.911 19 C -0.223 4.223 20 C -0.100 4.100 21 C -0.112 4.112 22 C -0.178 4.178 23 O -0.352 6.352 24 Si 0.583 3.417 25 C -0.066 4.066 26 C -0.161 4.161 27 C -0.182 4.182 28 C -0.088 4.088 29 H 0.151 0.849 30 H 0.154 0.846 31 H 0.150 0.850 32 H 0.098 0.902 33 H 0.120 0.880 34 H 0.238 0.762 35 H 0.113 0.887 36 H 0.113 0.887 37 H 0.149 0.851 38 H 0.138 0.862 39 H 0.092 0.908 40 H 0.229 0.771 41 H -0.177 1.177 42 H -0.180 1.180 43 H 0.155 0.845 44 H 0.157 0.843 45 H 0.117 0.883 46 H 0.096 0.904 47 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.349 2.894 -0.465 2.952 hybrid contribution -0.090 0.002 0.261 0.276 sum -0.440 2.896 -0.204 2.936 Atomic orbital electron populations 1.81312 1.12065 1.07784 1.07493 1.25740 0.92700 0.94065 0.94082 1.15988 0.84307 1.02510 1.00022 1.21252 0.94530 0.96840 0.96753 1.21138 0.93578 0.99391 0.99167 1.21310 1.00678 0.94825 0.93733 1.19575 0.92725 0.97977 0.96987 1.21642 0.95131 0.96045 0.96533 0.88118 1.23449 0.95406 0.99446 0.98970 1.21872 1.01008 0.91323 0.84299 0.87331 1.45471 1.12504 1.54885 1.23628 1.20010 0.84420 0.80796 0.84334 1.90794 1.26517 1.48022 1.72792 1.22470 0.86935 1.01459 0.93104 1.86171 1.31607 1.68814 1.33300 1.19035 0.94444 0.92003 0.85662 1.21108 0.98014 1.03834 0.99362 1.20668 0.96624 0.97787 0.94876 1.19264 0.94001 1.02026 0.95918 1.24609 1.11029 0.95481 0.86635 1.86503 1.94830 1.36469 1.17443 0.95298 0.76272 0.81309 0.88827 1.20857 0.98303 0.93725 0.93702 1.20542 0.96780 1.03149 0.95673 1.23595 0.94920 0.96889 1.02842 1.21070 0.93646 0.97012 0.97045 0.84877 0.84640 0.84978 0.90227 0.87972 0.76240 0.88687 0.88677 0.85093 0.86161 0.90827 0.77060 1.17652 1.18039 0.84545 0.84347 0.88285 0.90432 0.85051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.94 18.54 41.84 0.78 -1.17 16 2 C 0.25 0.45 15.33 -22.48 -0.34 0.10 16 3 C -0.02 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.15 9.76 -39.16 -0.38 -0.23 16 5 C -0.11 0.36 10.03 -39.64 -0.40 -0.04 16 6 C -0.09 0.29 8.60 -39.49 -0.34 -0.05 16 7 C -0.07 0.22 5.28 -104.68 -0.55 -0.33 16 8 C -0.08 0.32 3.86 -90.96 -0.35 -0.03 16 9 H 0.10 -0.52 8.09 -51.93 -0.42 -0.94 16 10 C -0.13 0.59 7.29 -25.92 -0.19 0.40 16 11 C 0.12 -0.32 4.32 -67.12 -0.29 -0.61 16 12 H 0.11 -0.08 7.46 -51.93 -0.39 -0.46 16 13 N -0.71 2.01 5.27 -53.02 -0.28 1.73 16 14 C 0.52 0.34 7.91 -10.99 -0.09 0.25 16 15 O -0.51 -2.87 16.10 -14.36 -0.23 -3.10 16 16 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 17 O -0.29 -0.85 9.67 -39.36 -0.38 -1.23 16 18 C 0.13 0.34 6.69 -39.22 -0.26 0.08 16 19 C -0.20 -0.25 9.04 -39.43 -0.36 -0.60 16 20 C -0.08 -0.16 8.66 -39.60 -0.34 -0.51 16 21 C -0.11 -0.24 5.39 -104.60 -0.56 -0.80 16 22 C -0.07 0.01 2.79 36.00 0.10 0.11 16 23 O -0.55 -0.07 12.81 -35.23 -0.45 -0.52 16 24 Si 0.68 -0.89 29.85 -169.99 -5.07 -5.97 16 25 C -0.05 -0.09 9.68 -39.61 -0.38 -0.48 16 26 C -0.14 -0.35 9.99 -39.43 -0.39 -0.74 16 27 C -0.14 0.47 7.25 -25.92 -0.19 0.29 16 28 C -0.07 0.15 9.41 -39.17 -0.37 -0.22 16 29 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 30 H 0.14 -0.66 8.06 -52.49 -0.42 -1.08 16 31 H 0.13 -0.65 6.64 -52.49 -0.35 -1.00 16 32 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 33 H 0.10 -0.47 7.72 -51.93 -0.40 -0.87 16 34 H 0.40 -2.37 8.70 -40.82 -0.36 -2.73 16 35 H 0.10 -0.32 7.65 -51.92 -0.40 -0.72 16 36 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 37 H 0.13 -0.23 6.30 -52.49 -0.33 -0.56 16 38 H 0.12 0.14 4.86 -52.49 -0.26 -0.11 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 41 H -0.25 -0.44 7.05 56.52 0.40 -0.04 16 42 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 43 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 44 H 0.14 0.21 8.06 -52.49 -0.42 -0.22 16 45 H 0.10 -0.37 6.30 -51.93 -0.33 -0.70 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.13 -0.44 8.05 -52.49 -0.42 -0.86 16 LS Contribution 403.28 15.07 6.08 6.08 Total: 0.00 -12.08 403.28 -11.48 -23.56 By element: Atomic # 1 Polarization: -9.74 SS G_CDS: -5.80 Total: -15.53 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -6.12 Total: -3.85 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: 0.50 Total: 0.57 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -1.06 Total: -4.86 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.07 Total: -5.97 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -12.08 -11.48 -23.56 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_2989410.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.777 kcal (2) G-P(sol) polarization free energy of solvation -12.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.555 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds