Wall clock time and date at job start Sun Mar 7 2021 00:46:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37643 * 125.67684 * 2 1 4 4 C 1.46671 * 126.22657 * 359.94719 * 3 2 1 5 5 O 1.21698 * 119.99979 * 5.08372 * 4 3 2 6 6 N 1.34773 * 120.00459 * 185.08317 * 4 3 2 7 7 C 1.46497 * 120.00499 * 174.93137 * 6 4 3 8 8 H 1.09002 * 112.84462 * 23.80241 * 7 6 4 9 9 C 1.53776 * 113.61364 * 155.00188 * 7 6 4 10 10 C 1.53781 * 87.08245 * 89.11670 * 9 7 6 11 11 H 1.09002 * 113.61100 * 270.88059 * 10 9 7 12 12 C 1.50704 * 113.61224 * 139.97857 * 10 9 7 13 13 C 1.37925 * 119.91913 * 119.72513 * 12 10 9 14 14 C 1.39656 * 119.84185 * 179.79068 * 13 12 10 15 15 C 1.43204 * 120.15046 * 180.22745 * 14 13 12 16 16 N 9.93344 * 159.85661 * 68.26465 * 4 1 2 17 17 C 1.39606 * 119.70008 * 0.47894 * 14 13 12 18 18 C 1.37974 * 119.84707 * 359.74967 * 17 14 13 19 19 C 1.38343 * 120.15060 * 0.02562 * 18 17 14 20 20 C 1.53776 * 87.08286 * 25.43205 * 10 9 7 21 21 C 1.37882 * 107.54914 * 179.70624 * 3 2 1 22 22 C 1.39886 * 107.09072 * 0.41904 * 21 3 2 23 23 Br 1.89101 * 126.07107 * 179.83689 * 22 21 3 24 24 C 1.35503 * 107.85174 * 359.57563 * 22 21 3 25 25 C 1.50700 * 125.56824 * 180.26323 * 24 22 21 26 26 O 1.42907 * 109.46978 * 115.22980 * 25 24 22 27 27 Si 1.86303 * 109.46986 * 235.22827 * 25 24 22 28 28 H 1.08997 * 109.47637 * 275.49766 * 1 2 3 29 29 H 1.09006 * 109.46935 * 35.49285 * 1 2 3 30 30 H 1.09003 * 109.47523 * 155.49303 * 1 2 3 31 31 H 0.97004 * 119.99458 * 354.93308 * 6 4 3 32 32 H 1.09009 * 113.61233 * 203.66604 * 9 7 6 33 33 H 1.09002 * 113.61664 * 334.56438 * 9 7 6 34 34 H 1.07997 * 120.08269 * 359.97438 * 13 12 10 35 35 H 1.07999 * 120.08065 * 179.76795 * 17 14 13 36 36 H 1.07997 * 119.92245 * 179.97438 * 18 17 14 37 37 H 1.07989 * 119.84620 * 179.97438 * 19 18 17 38 38 H 1.09003 * 113.61455 * 220.02428 * 20 10 9 39 39 H 1.09000 * 113.61715 * 89.11221 * 20 10 9 40 40 H 1.07999 * 126.45504 * 180.28482 * 21 3 2 41 41 H 1.09000 * 109.47247 * 355.23077 * 25 24 22 42 42 H 0.96697 * 113.99636 * 59.99968 * 26 25 24 43 43 H 1.48494 * 109.99932 * 63.68950 * 27 25 24 44 44 H 1.48503 * 109.99616 * 185.00730 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 -0.0011 5 8 0.6252 2.7646 0.0913 6 7 2.7079 3.5139 -0.1044 7 6 2.2472 4.9000 -0.2173 8 1 1.2489 5.0490 0.1943 9 6 3.2759 5.9329 0.2721 10 6 3.8301 5.9441 -1.1623 11 1 4.6057 5.1983 -1.3366 12 6 4.2162 7.3169 -1.6495 13 6 5.5193 7.5735 -2.0218 14 6 5.8744 8.8451 -2.4772 15 6 7.2243 9.1174 -2.8699 16 7 8.2952 9.3333 -3.1816 17 6 4.9086 9.8510 -2.5427 18 6 3.6098 9.5818 -2.1627 19 6 3.2639 8.3187 -1.7170 20 6 2.4321 5.4980 -1.6220 21 6 3.5781 0.6891 0.0067 22 6 3.5528 -0.7095 0.0010 23 35 5.0609 -1.8504 0.0019 24 6 2.2557 -1.1015 0.0007 25 6 1.7713 -2.5285 0.0009 26 8 1.0739 -2.7946 1.2196 27 14 0.6236 -2.7950 -1.4422 28 1 -0.3634 0.0984 1.0229 29 1 -0.3633 0.8368 -0.5967 30 1 -0.3634 -0.9351 -0.4263 31 1 3.6577 3.3170 -0.1039 32 1 2.8320 6.8809 0.5762 33 1 3.9762 5.5370 1.0077 34 1 6.2626 6.7922 -1.9640 35 1 5.1773 10.8376 -2.8904 36 1 2.8618 10.3592 -2.2126 37 1 2.2460 8.1135 -1.4204 38 1 2.4511 4.7510 -2.4156 39 1 1.7575 6.3271 -1.8357 40 1 4.4582 1.3150 0.0129 41 1 2.6242 -3.2019 -0.0840 42 1 0.3012 -2.2309 1.3616 43 1 1.3601 -2.6082 -2.7180 44 1 0.0448 -4.1614 -1.3852 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14329782_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:46:11 Heat of formation + Delta-G solvation = 77.544883 kcal Electronic energy + Delta-G solvation = -29657.612894 eV Core-core repulsion = 25396.982534 eV Total energy + Delta-G solvation = -4260.630359 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.052 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.88272 -41.44214 -40.23553 -38.90616 -37.88041 -37.43910 -35.01469 -34.20478 -32.43014 -32.20880 -31.63492 -30.88251 -27.42306 -27.30823 -26.59538 -25.86442 -24.80899 -23.33290 -22.74335 -21.79258 -20.77642 -20.45242 -19.01203 -18.89264 -18.06345 -17.36673 -17.19944 -17.00551 -16.77202 -16.49441 -16.09008 -15.86814 -15.66368 -15.39787 -15.14222 -14.91278 -14.64670 -14.45165 -14.39202 -14.31514 -14.20171 -14.14869 -13.96601 -13.75940 -13.68031 -13.35327 -13.19944 -12.96041 -12.89672 -12.74765 -12.45829 -12.38694 -11.92508 -11.72209 -11.62708 -11.33848 -11.16353 -11.06476 -10.82971 -10.11503 -9.88236 -9.78810 -9.62905 -9.27929 -5.20646 -0.16498 0.16233 0.40681 0.63087 0.91831 1.17637 1.45036 1.53806 1.57461 1.82966 1.92689 2.18624 2.29094 2.84768 2.88412 3.19303 3.42613 3.53303 3.56529 3.74315 3.75998 3.82898 3.91295 3.97488 4.06209 4.22653 4.23826 4.27647 4.34734 4.36234 4.42412 4.55207 4.64789 4.69468 4.78401 4.81931 4.90092 4.96391 5.05197 5.09209 5.15002 5.24293 5.26253 5.38127 5.45793 5.54394 5.58774 5.72397 5.84386 5.93193 6.40949 6.44725 6.45101 7.09924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.394 5.394 3 C -0.041 4.041 4 C 0.597 3.403 5 O -0.566 6.566 6 N -0.689 5.689 7 C 0.117 3.883 8 H 0.097 0.903 9 C -0.126 4.126 10 C -0.070 4.070 11 H 0.109 0.891 12 C -0.073 4.073 13 C -0.069 4.069 14 C -0.047 4.047 15 C 0.276 3.724 16 N -0.475 5.475 17 C -0.077 4.077 18 C -0.117 4.117 19 C -0.082 4.082 20 C -0.140 4.140 21 C -0.107 4.107 22 C -0.181 4.181 23 Br -0.031 7.031 24 C 0.048 3.952 25 C -0.055 4.055 26 O -0.541 6.541 27 Si 0.748 3.252 28 H 0.109 0.891 29 H 0.110 0.890 30 H 0.108 0.892 31 H 0.415 0.585 32 H 0.110 0.890 33 H 0.084 0.916 34 H 0.138 0.862 35 H 0.138 0.862 36 H 0.155 0.845 37 H 0.153 0.847 38 H 0.068 0.932 39 H 0.108 0.892 40 H 0.176 0.824 41 H 0.124 0.876 42 H 0.390 0.610 43 H -0.283 1.283 44 H -0.267 1.267 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.777 2.513 1.247 8.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.067 5.067 3 C -0.156 4.156 4 C 0.384 3.616 5 O -0.447 6.447 6 N -0.340 5.340 7 C 0.012 3.988 8 H 0.115 0.885 9 C -0.164 4.164 10 C -0.088 4.088 11 H 0.127 0.873 12 C -0.073 4.073 13 C -0.090 4.090 14 C -0.051 4.051 15 C -0.038 4.038 16 N -0.151 5.151 17 C -0.098 4.098 18 C -0.135 4.135 19 C -0.100 4.100 20 C -0.178 4.178 21 C -0.134 4.134 22 C -0.267 4.267 23 Br 0.053 6.947 24 C -0.074 4.074 25 C -0.165 4.165 26 O -0.348 6.348 27 Si 0.650 3.350 28 H 0.127 0.873 29 H 0.128 0.872 30 H 0.126 0.874 31 H 0.252 0.748 32 H 0.128 0.872 33 H 0.103 0.897 34 H 0.156 0.844 35 H 0.156 0.844 36 H 0.173 0.827 37 H 0.170 0.830 38 H 0.087 0.913 39 H 0.126 0.874 40 H 0.194 0.806 41 H 0.141 0.859 42 H 0.240 0.760 43 H -0.209 1.209 44 H -0.193 1.193 Dipole moment (debyes) X Y Z Total from point charges -6.509 1.751 0.183 6.743 hybrid contribution 0.955 -0.124 0.197 0.983 sum -5.554 1.627 0.379 5.800 Atomic orbital electron populations 1.22748 0.73685 1.05311 1.06574 1.43887 1.07907 1.03497 1.51416 1.20066 0.89872 0.87869 1.17747 1.16824 0.85528 0.83400 0.75814 1.90817 1.17169 1.84952 1.51746 1.45238 1.10044 1.05377 1.73362 1.21937 0.99657 0.79501 0.97750 0.88497 1.23427 0.97575 0.99477 0.95906 1.21639 0.97711 0.93086 0.96382 0.87292 1.19698 0.92366 0.96191 0.99087 1.21215 0.97134 0.94611 0.96015 1.16115 0.85002 0.96720 1.07222 1.26212 0.93042 0.92321 0.92259 1.81320 1.13404 1.09264 1.11139 1.21408 0.92798 0.98434 0.97139 1.21394 0.95726 0.98019 0.98327 1.21607 1.00563 0.92097 0.95735 1.23595 0.96396 1.01248 0.96585 1.21495 0.95973 0.92644 1.03316 1.20990 0.91340 0.95056 1.19335 1.96663 1.36257 1.63519 1.98252 1.20773 0.89873 0.90183 1.06549 1.24974 1.03074 0.90154 0.98292 1.86596 1.45943 1.63003 1.39273 0.94474 0.83344 0.83985 0.73230 0.87284 0.87171 0.87418 0.74765 0.87187 0.89741 0.84396 0.84382 0.82697 0.82958 0.91334 0.87388 0.80624 0.85851 0.76012 1.20884 1.19256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.43 8.82 127.77 1.13 0.69 16 2 N -0.39 0.68 3.10 -519.62 -1.61 -0.93 16 3 C -0.04 0.03 6.88 40.35 0.28 0.30 16 4 C 0.60 -0.42 7.77 86.45 0.67 0.25 16 5 O -0.57 -2.52 14.45 -4.34 -0.06 -2.58 16 6 N -0.69 4.49 5.25 -444.01 -2.33 2.16 16 7 C 0.12 -0.91 4.36 45.52 0.20 -0.71 16 8 H 0.10 -0.43 7.41 -2.39 -0.02 -0.45 16 9 C -0.13 1.40 7.29 31.12 0.23 1.63 16 10 C -0.07 0.74 3.85 -11.01 -0.04 0.70 16 11 H 0.11 -1.30 8.09 -2.39 -0.02 -1.32 16 12 C -0.07 0.60 5.28 -19.90 -0.11 0.49 16 13 C -0.07 0.35 9.41 22.54 0.21 0.57 16 14 C -0.05 0.09 5.73 -21.36 -0.12 -0.03 16 15 C 0.28 1.29 15.33 88.33 1.35 2.65 16 16 N -0.48 -5.35 18.54 19.01 0.35 -5.00 16 17 C -0.08 0.39 9.76 22.54 0.22 0.61 16 18 C -0.12 1.00 10.03 22.23 0.22 1.22 16 19 C -0.08 0.78 8.60 22.33 0.19 0.97 16 20 C -0.14 1.31 7.25 31.12 0.23 1.53 16 21 C -0.11 0.12 10.34 22.58 0.23 0.36 16 22 C -0.18 -0.46 6.53 22.04 0.14 -0.31 16 23 Br -0.03 -0.11 33.06 -20.37 -0.67 -0.79 16 24 C 0.05 0.04 5.29 41.34 0.22 0.26 16 25 C -0.06 0.00 2.87 71.24 0.20 0.21 16 26 O -0.54 0.24 12.88 -148.98 -1.92 -1.68 16 27 Si 0.75 -1.89 29.26 68.60 2.01 0.12 16 28 H 0.11 -1.13 8.14 -2.39 -0.02 -1.15 16 29 H 0.11 -0.67 6.76 -2.38 -0.02 -0.69 16 30 H 0.11 -1.41 3.79 -2.39 -0.01 -1.42 16 31 H 0.41 -4.47 7.60 -92.71 -0.70 -5.18 16 32 H 0.11 -1.35 7.72 -2.38 -0.02 -1.37 16 33 H 0.08 -0.95 8.14 -2.39 -0.02 -0.97 16 34 H 0.14 -0.96 8.05 -2.91 -0.02 -0.98 16 35 H 0.14 -0.93 8.06 -2.91 -0.02 -0.96 16 36 H 0.16 -1.96 8.06 -2.91 -0.02 -1.99 16 37 H 0.15 -2.09 6.64 -2.92 -0.02 -2.11 16 38 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 39 H 0.11 -1.21 6.30 -2.39 -0.02 -1.22 16 40 H 0.18 -1.18 7.45 -2.91 -0.02 -1.20 16 41 H 0.12 0.29 6.96 -2.39 -0.02 0.27 16 42 H 0.39 -3.46 7.44 -74.06 -0.55 -4.01 16 43 H -0.28 -1.15 7.11 99.48 0.71 -0.44 16 44 H -0.27 -0.71 7.11 99.48 0.71 0.00 16 Total: 0.00 -24.08 390.90 1.10 -22.98 By element: Atomic # 1 Polarization: -25.55 SS G_CDS: -0.12 Total: -25.67 kcal Atomic # 6 Polarization: 5.93 SS G_CDS: 5.46 Total: 11.39 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -3.59 Total: -3.77 kcal Atomic # 8 Polarization: -2.28 SS G_CDS: -1.98 Total: -4.26 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: 2.01 Total: 0.12 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.67 Total: -0.79 kcal Total: -24.08 1.10 -22.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.524 kcal (2) G-P(sol) polarization free energy of solvation -24.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.979 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds