Wall clock time and date at job start Sun Mar 7 2021 00:46:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36772 * 125.79976 * 2 1 4 4 C 1.47259 * 126.94452 * 359.97438 * 3 2 1 5 5 O 1.21629 * 120.00034 * 359.70577 * 4 3 2 6 6 N 1.34775 * 120.00351 * 179.70390 * 4 3 2 7 7 C 1.46498 * 120.00357 * 179.97438 * 6 4 3 8 8 H 1.09005 * 112.84959 * 336.20556 * 7 6 4 9 9 C 1.53779 * 113.69098 * 107.46311 * 7 6 4 10 10 C 1.53788 * 87.07838 * 89.13141 * 9 7 6 11 11 H 1.09000 * 113.69093 * 270.88062 * 10 9 7 12 12 C 1.50697 * 113.61651 * 139.98130 * 10 9 7 13 13 C 1.37919 * 119.92608 * 142.48274 * 12 10 9 14 14 C 1.39653 * 119.84754 * 180.02562 * 13 12 10 15 15 C 1.43204 * 120.14808 * 180.02562 * 14 13 12 16 16 N 9.93454 * 163.78273 * 295.23610 * 4 1 2 17 17 C 1.39607 * 119.69761 * 359.72866 * 14 13 12 18 18 C 1.37966 * 119.84915 * 0.54766 * 17 14 13 19 19 C 1.38346 * 120.14729 * 359.44787 * 18 17 14 20 20 C 1.53776 * 113.62062 * 205.00338 * 7 6 4 21 21 C 1.46694 * 106.11424 * 179.71842 * 3 2 1 22 22 C 1.34487 * 106.33246 * 0.26552 * 21 3 2 23 23 C 1.50695 * 125.56861 * 180.02562 * 22 21 3 24 24 O 1.42902 * 109.47150 * 65.00388 * 23 22 21 25 25 Si 1.86305 * 109.46740 * 184.99853 * 23 22 21 26 26 N 1.34657 * 125.80397 * 180.17419 * 2 1 3 27 27 H 1.09004 * 109.47363 * 89.99784 * 1 2 3 28 28 H 1.08997 * 109.46674 * 209.99479 * 1 2 3 29 29 H 1.09001 * 109.47203 * 329.99388 * 1 2 3 30 30 H 0.97003 * 119.99833 * 0.02562 * 6 4 3 31 31 H 1.09005 * 113.61427 * 334.58891 * 9 7 6 32 32 H 1.08995 * 113.61943 * 203.67387 * 9 7 6 33 33 H 1.08003 * 120.07801 * 0.04505 * 13 12 10 34 34 H 1.08004 * 120.07985 * 180.27299 * 17 14 13 35 35 H 1.08002 * 119.93050 * 179.73249 * 18 17 14 36 36 H 1.08003 * 119.84561 * 180.30177 * 19 18 17 37 37 H 1.08995 * 113.61586 * 156.24748 * 20 7 6 38 38 H 1.09001 * 113.68484 * 25.36430 * 20 7 6 39 39 H 1.08003 * 126.82966 * 180.29919 * 21 3 2 40 40 H 1.08998 * 109.47587 * 304.99892 * 23 22 21 41 41 H 0.96703 * 113.99943 * 59.99375 * 24 23 22 42 42 H 1.48503 * 109.99535 * 180.02562 * 25 23 22 43 43 H 1.48497 * 110.00099 * 301.31918 * 25 23 22 44 44 H 0.97001 * 124.85539 * 0.04663 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0064 6 7 2.7849 3.5054 0.0056 7 6 2.3503 4.9045 0.0045 8 1 1.3493 5.0365 -0.4063 9 6 2.5630 5.6186 1.3497 10 6 3.9627 5.9977 0.8375 11 1 4.7285 5.2566 1.0668 12 6 4.3785 7.4002 1.1993 13 6 5.6890 7.6633 1.5393 14 6 6.0725 8.9635 1.8747 15 6 7.4316 9.2440 2.2282 16 7 8.5108 9.4658 2.5077 17 6 5.1262 9.9898 1.8578 18 6 3.8175 9.7116 1.5213 19 6 3.4445 8.4212 1.1901 20 6 3.3903 5.8722 -0.5842 21 6 3.6882 0.6152 0.0069 22 6 3.6096 -0.7274 0.0045 23 6 4.7820 -1.6741 0.0101 24 8 5.5029 -1.5323 1.2358 25 14 4.1666 -3.4254 -0.1492 26 7 2.2947 -1.0921 -0.0033 27 1 -0.3634 0.0000 -1.0277 28 1 -0.3632 -0.8900 0.5138 29 1 -0.3634 0.8899 0.5139 30 1 3.7310 3.2915 0.0099 31 1 2.5793 4.9430 2.2050 32 1 1.9057 6.4753 1.4981 33 1 6.4171 6.8656 1.5458 34 1 5.4170 10.9985 2.1119 35 1 3.0834 10.5038 1.5121 36 1 2.4196 8.2099 0.9227 37 1 2.9590 6.7981 -0.9646 38 1 4.0748 5.4027 -1.2907 39 1 4.5890 1.2110 0.0133 40 1 5.4400 -1.4427 -0.8274 41 1 4.9781 -1.7232 2.0252 42 1 5.3134 -4.3690 -0.1442 43 1 3.2433 -3.7431 0.9696 44 1 1.9735 -2.0074 -0.0068 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14329782_9865296.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:46:58 Heat of formation + Delta-G solvation = 58.254694 kcal Electronic energy + Delta-G solvation = -27408.427949 eV Core-core repulsion = 23486.779107 eV Total energy + Delta-G solvation = -3921.648842 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.142 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.53633 -41.53455 -40.16886 -38.82945 -37.96340 -37.24958 -34.52389 -32.85353 -32.48472 -32.35486 -31.57100 -29.01755 -26.79217 -26.62667 -25.53425 -24.88698 -23.56376 -22.82308 -21.66185 -20.75669 -20.54014 -19.05242 -18.81053 -17.83622 -17.44895 -17.05490 -16.94872 -16.68943 -16.57012 -15.98555 -15.73045 -15.59778 -15.20622 -15.03739 -14.88850 -14.78524 -14.59134 -14.28403 -14.12261 -14.02497 -13.93136 -13.86569 -13.65830 -13.54205 -13.43837 -12.98647 -12.90011 -12.82257 -12.66232 -12.62216 -12.22300 -11.90703 -11.75488 -11.29971 -10.96479 -10.60223 -10.05886 -10.02807 -9.86225 -9.76738 -9.19085 -5.26286 -0.26941 0.21354 0.74624 0.96542 1.20990 1.26983 1.67504 1.72216 1.94115 1.95022 2.37616 2.61517 2.80563 2.86618 3.16427 3.38577 3.54816 3.58377 3.66389 3.75264 3.79359 3.87867 3.97828 4.03485 4.08847 4.15282 4.16128 4.36519 4.36840 4.45650 4.60711 4.63093 4.66755 4.67396 4.71766 4.80669 4.84874 4.90763 4.97888 4.98167 5.08633 5.21252 5.24012 5.26097 5.44044 5.64701 5.69486 5.72372 5.82782 6.20601 6.28916 6.53453 6.67346 7.45024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.126 3.874 3 C -0.242 4.242 4 C 0.597 3.403 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.123 3.877 8 H 0.106 0.894 9 C -0.144 4.144 10 C -0.076 4.076 11 H 0.100 0.900 12 C -0.071 4.071 13 C -0.067 4.067 14 C -0.026 4.026 15 C 0.250 3.750 16 N -0.413 5.413 17 C -0.074 4.074 18 C -0.116 4.116 19 C -0.087 4.087 20 C -0.136 4.136 21 C -0.127 4.127 22 C -0.027 4.027 23 C -0.040 4.040 24 O -0.522 6.522 25 Si 0.670 3.330 26 N -0.546 5.546 27 H 0.083 0.917 28 H 0.066 0.934 29 H 0.104 0.896 30 H 0.401 0.599 31 H 0.076 0.924 32 H 0.096 0.904 33 H 0.132 0.868 34 H 0.133 0.867 35 H 0.135 0.865 36 H 0.133 0.867 37 H 0.099 0.901 38 H 0.078 0.922 39 H 0.146 0.854 40 H 0.130 0.870 41 H 0.377 0.623 42 H -0.246 1.246 43 H -0.256 1.256 44 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.427 -3.250 -2.977 6.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.007 3.993 3 C -0.251 4.251 4 C 0.387 3.613 5 O -0.425 6.425 6 N -0.361 5.361 7 C 0.017 3.983 8 H 0.124 0.876 9 C -0.183 4.183 10 C -0.094 4.094 11 H 0.118 0.882 12 C -0.071 4.071 13 C -0.088 4.088 14 C -0.029 4.029 15 C -0.065 4.065 16 N -0.088 5.088 17 C -0.095 4.095 18 C -0.133 4.133 19 C -0.105 4.105 20 C -0.174 4.174 21 C -0.152 4.152 22 C -0.135 4.135 23 C -0.152 4.152 24 O -0.328 6.328 25 Si 0.570 3.430 26 N -0.145 5.145 27 H 0.101 0.899 28 H 0.085 0.915 29 H 0.122 0.878 30 H 0.235 0.765 31 H 0.094 0.906 32 H 0.114 0.886 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.153 0.847 36 H 0.150 0.850 37 H 0.117 0.883 38 H 0.097 0.903 39 H 0.164 0.836 40 H 0.148 0.852 41 H 0.225 0.775 42 H -0.169 1.169 43 H -0.181 1.181 44 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -3.140 -3.503 -2.587 5.369 hybrid contribution 0.315 -0.178 1.105 1.163 sum -2.825 -3.681 -1.481 4.871 Atomic orbital electron populations 1.20661 0.86523 1.04542 1.03987 1.20413 0.93798 0.85255 0.99857 1.20077 0.93035 0.91964 1.20069 1.17296 0.85207 0.83966 0.74867 1.90756 1.16576 1.84311 1.50851 1.45423 1.09748 1.04894 1.76065 1.21784 0.99606 0.80228 0.96681 0.87565 1.23589 0.95569 1.00898 0.98249 1.21639 0.97686 0.93011 0.97046 0.88166 1.19616 0.92752 0.95460 0.99235 1.21086 0.96170 0.94853 0.96692 1.15986 0.85958 0.94975 1.05966 1.25781 0.92836 0.94005 0.93893 1.81337 1.11584 1.07221 1.08668 1.21230 0.92586 0.98480 0.97202 1.21130 0.95749 0.97127 0.99343 1.21315 0.99862 0.92288 0.97076 1.23442 0.98130 1.00056 0.95792 1.21793 0.95656 0.92578 1.05154 1.20466 0.84325 0.95643 1.13043 1.24379 0.93483 1.06991 0.90304 1.86660 1.40190 1.90792 1.15172 0.95543 0.83359 0.75092 0.89020 1.41745 1.05601 1.08529 1.58620 0.89858 0.91545 0.87779 0.76463 0.90561 0.88587 0.85042 0.84951 0.84703 0.84970 0.88253 0.90328 0.83581 0.85245 0.77490 1.16935 1.18098 0.74730 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.88 36.00 0.36 0.44 16 2 C 0.13 0.02 7.17 -81.89 -0.59 -0.56 16 3 C -0.24 -0.28 6.29 -103.35 -0.65 -0.93 16 4 C 0.60 1.31 7.81 -12.60 -0.10 1.21 16 5 O -0.55 -2.78 14.42 5.25 0.08 -2.71 16 6 N -0.71 0.48 5.26 -54.15 -0.28 0.20 16 7 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 8 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 9 C -0.14 0.31 7.25 -25.92 -0.19 0.12 16 10 C -0.08 0.23 3.86 -90.96 -0.35 -0.12 16 11 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 12 C -0.07 0.15 5.28 -104.69 -0.55 -0.40 16 13 C -0.07 0.09 9.41 -39.17 -0.37 -0.28 16 14 C -0.03 0.01 5.73 -106.93 -0.61 -0.61 16 15 C 0.25 0.59 15.33 -22.45 -0.34 0.24 16 16 N -0.41 -2.16 18.54 41.86 0.78 -1.38 16 17 C -0.07 0.12 9.76 -39.17 -0.38 -0.27 16 18 C -0.12 0.30 10.03 -39.64 -0.40 -0.10 16 19 C -0.09 0.24 8.60 -39.49 -0.34 -0.10 16 20 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 21 C -0.13 0.04 10.45 -37.49 -0.39 -0.35 16 22 C -0.03 0.03 6.09 -81.87 -0.50 -0.47 16 23 C -0.04 0.08 2.98 36.00 0.11 0.19 16 24 O -0.52 0.23 12.88 -35.23 -0.45 -0.23 16 25 Si 0.67 -1.98 30.96 -169.99 -5.26 -7.24 16 26 N -0.55 0.93 5.41 -5.42 -0.03 0.90 16 27 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.10 0.12 6.47 -51.93 -0.34 -0.21 16 30 H 0.40 -1.04 7.83 -40.82 -0.32 -1.36 16 31 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.10 -0.28 6.30 -51.93 -0.33 -0.61 16 33 H 0.13 -0.31 8.05 -52.48 -0.42 -0.74 16 34 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 35 H 0.14 -0.60 8.06 -52.49 -0.42 -1.02 16 36 H 0.13 -0.56 6.65 -52.48 -0.35 -0.91 16 37 H 0.10 -0.36 7.72 -51.93 -0.40 -0.76 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.15 -0.26 7.70 -52.48 -0.40 -0.67 16 40 H 0.13 -0.37 7.96 -51.93 -0.41 -0.79 16 41 H 0.38 -1.13 8.70 45.56 0.40 -0.73 16 42 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 43 H -0.26 0.33 7.11 56.52 0.40 0.73 16 44 H 0.41 -1.65 6.72 -40.82 -0.27 -1.93 16 LS Contribution 377.55 15.07 5.69 5.69 Total: 0.00 -9.26 377.55 -10.66 -19.92 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -5.39 Total: -12.95 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: -5.78 Total: -2.20 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: 0.46 Total: -0.28 kcal Atomic # 8 Polarization: -2.56 SS G_CDS: -0.38 Total: -2.93 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.26 Total: -7.24 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -9.26 -10.66 -19.92 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14329782_9865296.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.174 kcal (2) G-P(sol) polarization free energy of solvation -9.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.919 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.255 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds